RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.5
NCAPD3-203ENST00000525964 DRC7Q8IY82 874 aa18.14■□□□□ 0.49
NCAPD3-203ENST00000525964 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
NCAPD3-203ENST00000525964 NAP1L5Q96NT1 182 aaPredicted RBP18.14■□□□□ 0.49
NCAPD3-203ENST00000525964 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
NCAPD3-203ENST00000525964 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
NCAPD3-203ENST00000525964 COG3Q96JB2 828 aa18.12■□□□□ 0.49
NCAPD3-203ENST00000525964 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
NCAPD3-203ENST00000525964 CLUAP1Q96AJ1 413 aa18.11■□□□□ 0.49
NCAPD3-203ENST00000525964 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
NCAPD3-203ENST00000525964 MSNP26038 577 aaKnown RBP18.1■□□□□ 0.49
NCAPD3-203ENST00000525964 ST20-MTHFSA0A0A6YYL1 179 aa18.09■□□□□ 0.49
NCAPD3-203ENST00000525964 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
NCAPD3-203ENST00000525964 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.49
NCAPD3-203ENST00000525964 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
NCAPD3-203ENST00000525964 KIF15Q9NS87 1388 aa18.08■□□□□ 0.49
NCAPD3-203ENST00000525964 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
NCAPD3-203ENST00000525964 SYAP1Q96A49 352 aaPredicted RBP18.07■□□□□ 0.48
NCAPD3-203ENST00000525964 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
NCAPD3-203ENST00000525964 TEFQ10587 303 aa18.06■□□□□ 0.48
NCAPD3-203ENST00000525964 EVA1CP58658 441 aa18.05■□□□□ 0.48
NCAPD3-203ENST00000525964 PANK3Q9H999 370 aa18.05■□□□□ 0.48
NCAPD3-203ENST00000525964 MYBBP1AQ9BQG0 1328 aaKnown RBP18.05■□□□□ 0.48
NCAPD3-203ENST00000525964 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
NCAPD3-203ENST00000525964 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
NCAPD3-203ENST00000525964 MFAP1P55081 439 aaKnown RBP18.04■□□□□ 0.48
NCAPD3-203ENST00000525964 WIZO95785 1651 aa18.03■□□□□ 0.48
NCAPD3-203ENST00000525964 TOMM22Q9NS69 142 aa18.02■□□□□ 0.47
NCAPD3-203ENST00000525964 TPM4P67936 248 aa18.01■□□□□ 0.47
NCAPD3-203ENST00000525964 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
NCAPD3-203ENST00000525964 CSPP1Q1MSJ5 1256 aa18.01■□□□□ 0.47
NCAPD3-203ENST00000525964 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
NCAPD3-203ENST00000525964 MINK1Q8N4C8 1332 aaPredicted RBP18■□□□□ 0.47
NCAPD3-203ENST00000525964 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
NCAPD3-203ENST00000525964 TTC5Q8N0Z6 440 aa17.99■□□□□ 0.47
NCAPD3-203ENST00000525964 RASSF8Q8NHQ8 419 aa17.99■□□□□ 0.47
NCAPD3-203ENST00000525964 NEXNQ0ZGT2 675 aa17.99■□□□□ 0.47
NCAPD3-203ENST00000525964 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
NCAPD3-203ENST00000525964 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
NCAPD3-203ENST00000525964 CHMP4CQ96CF2 233 aa17.98■□□□□ 0.47
NCAPD3-203ENST00000525964 STAC3Q96MF2 364 aa17.98■□□□□ 0.47
NCAPD3-203ENST00000525964 ST18O60284 1047 aa17.97■□□□□ 0.47
NCAPD3-203ENST00000525964 ELL2O00472 640 aaPredicted RBP17.97■□□□□ 0.47
NCAPD3-203ENST00000525964 E9PSI1 815 aa17.97■□□□□ 0.47
NCAPD3-203ENST00000525964 NGEFQ8N5V2 710 aa17.96■□□□□ 0.47
NCAPD3-203ENST00000525964 KIF16BQ96L93 1317 aa17.96■□□□□ 0.47
NCAPD3-203ENST00000525964 FAM69CQ0P6D2 419 aa17.96■□□□□ 0.47
NCAPD3-203ENST00000525964 LRRFIP1Q32MZ4 808 aaKnown RBP17.96■□□□□ 0.47
NCAPD3-203ENST00000525964 PSME1Q06323 249 aa17.95■□□□□ 0.46
NCAPD3-203ENST00000525964 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
NCAPD3-203ENST00000525964 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
NCAPD3-203ENST00000525964 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
NCAPD3-203ENST00000525964 MARCH6O60337 910 aa17.93■□□□□ 0.46
NCAPD3-203ENST00000525964 DIAPH1O60610 1272 aaKnown RBP17.93■□□□□ 0.46
NCAPD3-203ENST00000525964 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
NCAPD3-203ENST00000525964 USP47Q96K76 1375 aa17.92■□□□□ 0.46
NCAPD3-203ENST00000525964 SF3A1Q15459 793 aaKnown RBP17.91■□□□□ 0.46
NCAPD3-203ENST00000525964 MSH5O43196 834 aa17.9■□□□□ 0.46
NCAPD3-203ENST00000525964 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
NCAPD3-203ENST00000525964 C9orf78Q9NZ63 289 aaPredicted RBP17.9■□□□□ 0.46
NCAPD3-203ENST00000525964 PRKRIP1Q9H875 184 aaPredicted RBP17.9■□□□□ 0.46
NCAPD3-203ENST00000525964 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
NCAPD3-203ENST00000525964 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
NCAPD3-203ENST00000525964 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
NCAPD3-203ENST00000525964 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 BCL2L13Q9BXK5 485 aa17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
NCAPD3-203ENST00000525964 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
NCAPD3-203ENST00000525964 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
NCAPD3-203ENST00000525964 AKAP17AQ02040 695 aaKnown RBP17.87■□□□□ 0.45
NCAPD3-203ENST00000525964 ATF3P18847 181 aa17.87■□□□□ 0.45
NCAPD3-203ENST00000525964 APAF1O14727 1248 aa17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 AMOTL1Q8IY63 956 aa17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 VPS53Q5VIR6 699 aa17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 SYNE3Q6ZMZ3 975 aa17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 IGF1RP08069 1367 aa17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 NOC3LQ8WTT2 800 aaKnown RBP17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 RUFY2Q8WXA3 655 aa17.86■□□□□ 0.45
NCAPD3-203ENST00000525964 RAPGEF4Q8WZA2 1011 aa17.85■□□□□ 0.45
NCAPD3-203ENST00000525964 DIAPH3Q9NSV4 1193 aa17.85■□□□□ 0.45
NCAPD3-203ENST00000525964 PHF14O94880 888 aa17.85■□□□□ 0.45
NCAPD3-203ENST00000525964 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
NCAPD3-203ENST00000525964 FAM184AQ8NB25 1140 aa17.84■□□□□ 0.45
NCAPD3-203ENST00000525964 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
NCAPD3-203ENST00000525964 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
NCAPD3-203ENST00000525964 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.45
NCAPD3-203ENST00000525964 H3BQV1 296 aa17.83■□□□□ 0.45
NCAPD3-203ENST00000525964 IFFO2Q5TF58 517 aa17.83■□□□□ 0.45
NCAPD3-203ENST00000525964 RIPK4P57078 832 aa17.83■□□□□ 0.44
NCAPD3-203ENST00000525964 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.44
NCAPD3-203ENST00000525964 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
NCAPD3-203ENST00000525964 DEKP35659 375 aaKnown RBP17.82■□□□□ 0.44
NCAPD3-203ENST00000525964 IPO9Q96P70 1041 aaKnown RBP17.82■□□□□ 0.44
NCAPD3-203ENST00000525964 GOLGA6L3A6NEY3 463 aa17.82■□□□□ 0.44
NCAPD3-203ENST00000525964 CEP89Q96ST8 783 aa17.82■□□□□ 0.44
NCAPD3-203ENST00000525964 ZKSCAN1P17029 563 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms