RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
CTNND1-209ENST00000524579 PTPREP23469 700 aa11.61□□□□□ -0.55
CTNND1-209ENST00000524579 PBX2P40425 430 aa11.61□□□□□ -0.55
CTNND1-209ENST00000524579 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
CTNND1-209ENST00000524579 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
CTNND1-209ENST00000524579 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
CTNND1-209ENST00000524579 PCDH10Q9P2E7 1040 aa11.59□□□□□ -0.55
CTNND1-209ENST00000524579 COL9A1P20849 921 aa11.58□□□□□ -0.56
CTNND1-209ENST00000524579 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
CTNND1-209ENST00000524579 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
CTNND1-209ENST00000524579 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
CTNND1-209ENST00000524579 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
CTNND1-209ENST00000524579 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
CTNND1-209ENST00000524579 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
CTNND1-209ENST00000524579 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
CTNND1-209ENST00000524579 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
CTNND1-209ENST00000524579 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-209ENST00000524579 BCANQ96GW7 911 aa11.5□□□□□ -0.57
CTNND1-209ENST00000524579 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
CTNND1-209ENST00000524579 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-209ENST00000524579 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
CTNND1-209ENST00000524579 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
CTNND1-209ENST00000524579 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
CTNND1-209ENST00000524579 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
CTNND1-209ENST00000524579 TK2O00142 265 aa11.45□□□□□ -0.58
CTNND1-209ENST00000524579 SLC4A5Q9BY07 1137 aa11.45□□□□□ -0.58
CTNND1-209ENST00000524579 PTGDRQ13258 359 aa11.44□□□□□ -0.58
CTNND1-209ENST00000524579 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
CTNND1-209ENST00000524579 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
CTNND1-209ENST00000524579 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
CTNND1-209ENST00000524579 PRSS12P56730 875 aa11.43□□□□□ -0.58
CTNND1-209ENST00000524579 FCHSD2O94868 740 aa11.42□□□□□ -0.58
CTNND1-209ENST00000524579 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
CTNND1-209ENST00000524579 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
CTNND1-209ENST00000524579 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
CTNND1-209ENST00000524579 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
CTNND1-209ENST00000524579 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
CTNND1-209ENST00000524579 FAM198AQ9UFP1 575 aa11.41□□□□□ -0.58
CTNND1-209ENST00000524579 HRO43593 1189 aa11.4□□□□□ -0.58
CTNND1-209ENST00000524579 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
CTNND1-209ENST00000524579 GPR37O15354 613 aa11.38□□□□□ -0.59
CTNND1-209ENST00000524579 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
CTNND1-209ENST00000524579 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-209ENST00000524579 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-209ENST00000524579 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
CTNND1-209ENST00000524579 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
CTNND1-209ENST00000524579 C3orf80F5H4A9 247 aa11.36□□□□□ -0.59
CTNND1-209ENST00000524579 FECHP22830 423 aa11.36□□□□□ -0.59
CTNND1-209ENST00000524579 HIC1Q14526 733 aa11.35□□□□□ -0.59
CTNND1-209ENST00000524579 TTC13Q8NBP0 860 aa11.35□□□□□ -0.59
CTNND1-209ENST00000524579 SMAPO00193 183 aa11.34□□□□□ -0.59
CTNND1-209ENST00000524579 GNPATO15228 680 aa11.34□□□□□ -0.59
CTNND1-209ENST00000524579 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
CTNND1-209ENST00000524579 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-209ENST00000524579 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
CTNND1-209ENST00000524579 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
CTNND1-209ENST00000524579 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
CTNND1-209ENST00000524579 TATDN2Q93075 761 aa11.32□□□□□ -0.6
CTNND1-209ENST00000524579 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
CTNND1-209ENST00000524579 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
CTNND1-209ENST00000524579 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
CTNND1-209ENST00000524579 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
CTNND1-209ENST00000524579 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
CTNND1-209ENST00000524579 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
CTNND1-209ENST00000524579 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
CTNND1-209ENST00000524579 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
CTNND1-209ENST00000524579 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
CTNND1-209ENST00000524579 LAPTM4BQ86VI4 370 aa11.26□□□□□ -0.61
CTNND1-209ENST00000524579 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
CTNND1-209ENST00000524579 EYA1Q99502 592 aa11.25□□□□□ -0.61
CTNND1-209ENST00000524579 ZMYND10O75800 440 aa11.24□□□□□ -0.61
CTNND1-209ENST00000524579 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-209ENST00000524579 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
CTNND1-209ENST00000524579 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
CTNND1-209ENST00000524579 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
CTNND1-209ENST00000524579 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
CTNND1-209ENST00000524579 WNT2BQ93097 391 aa11.22□□□□□ -0.61
CTNND1-209ENST00000524579 IRF6O14896 467 aa11.21□□□□□ -0.61
CTNND1-209ENST00000524579 OATP04181 439 aa11.21□□□□□ -0.61
CTNND1-209ENST00000524579 MAP2K5Q13163 448 aa11.21□□□□□ -0.61
CTNND1-209ENST00000524579 BARGINQ6ZT62 677 aa11.21□□□□□ -0.61
CTNND1-209ENST00000524579 MINK1Q8N4C8 1332 aaPredicted RBP11.19□□□□□ -0.62
CTNND1-209ENST00000524579 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
CTNND1-209ENST00000524579 ANKK1Q8NFD2 765 aa11.19□□□□□ -0.62
CTNND1-209ENST00000524579 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
CTNND1-209ENST00000524579 RCCD1A6NED2 376 aa11.18□□□□□ -0.62
CTNND1-209ENST00000524579 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
CTNND1-209ENST00000524579 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
CTNND1-209ENST00000524579 BCAMP50895 628 aa11.17□□□□□ -0.62
CTNND1-209ENST00000524579 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
CTNND1-209ENST00000524579 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
CTNND1-209ENST00000524579 DNAJB2P25686 324 aa11.15□□□□□ -0.62
CTNND1-209ENST00000524579 PTPN5P54829 565 aa11.15□□□□□ -0.62
CTNND1-209ENST00000524579 SWT1Q5T5J6 900 aaKnown RBP11.15□□□□□ -0.62
CTNND1-209ENST00000524579 THSD4Q6ZMP0 1018 aa11.15□□□□□ -0.62
CTNND1-209ENST00000524579 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.62
CTNND1-209ENST00000524579 SOWAHBA6NEL2 793 aa11.14□□□□□ -0.63
CTNND1-209ENST00000524579 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
CTNND1-209ENST00000524579 LRCH3Q96II8 777 aa11.14□□□□□ -0.63
CTNND1-209ENST00000524579 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms