RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 LRRFIP1Q32MZ4 808 aaKnown RBP18.9■□□□□ 0.62
UBR5-207ENST00000520539 CLIP1P30622 1438 aa18.9■□□□□ 0.62
UBR5-207ENST00000520539 FEZ1Q99689 392 aa18.9■□□□□ 0.62
UBR5-207ENST00000520539 ANO8Q9HCE9 1232 aaPredicted RBP18.9■□□□□ 0.62
UBR5-207ENST00000520539 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
UBR5-207ENST00000520539 KRI1Q8N9T8 703 aaKnown RBP18.88■□□□□ 0.61
UBR5-207ENST00000520539 IFT57Q9NWB7 429 aa18.88■□□□□ 0.61
UBR5-207ENST00000520539 KIF7Q2M1P5 1343 aa18.87■□□□□ 0.61
UBR5-207ENST00000520539 ODF2Q5BJF6 829 aa18.87■□□□□ 0.61
UBR5-207ENST00000520539 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
UBR5-207ENST00000520539 CT47A1Q5JQC4 288 aaPredicted RBP18.86■□□□□ 0.61
UBR5-207ENST00000520539 PLCD4Q9BRC7 762 aa18.86■□□□□ 0.61
UBR5-207ENST00000520539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■□□□ 14.1
UBR5-207ENST00000520539 RNF20Q5VTR2 975 aa18.85■□□□□ 0.61
UBR5-207ENST00000520539 ERLIN1O75477 346 aa18.85■□□□□ 0.61
UBR5-207ENST00000520539 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
UBR5-207ENST00000520539 TCEAL9Q9UHQ7 104 aa18.84■□□□□ 0.61
UBR5-207ENST00000520539 TMX4Q9H1E5 349 aaPredicted RBP18.84■□□□□ 0.61
UBR5-207ENST00000520539 LETM1O95202 739 aaPredicted RBP18.84■□□□□ 0.61
UBR5-207ENST00000520539 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
UBR5-207ENST00000520539 CGNL1Q0VF96 1302 aa18.84■□□□□ 0.61
UBR5-207ENST00000520539 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.6
UBR5-207ENST00000520539 RCAN3Q9UKA8 241 aa18.83■□□□□ 0.6
UBR5-207ENST00000520539 CT47B1P0C2W7 299 aaPredicted RBP18.82■□□□□ 0.6
UBR5-207ENST00000520539 REC8O95072 547 aa18.82■□□□□ 0.6
UBR5-207ENST00000520539 RALBP1Q15311 655 aa18.82■□□□□ 0.6
UBR5-207ENST00000520539 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
UBR5-207ENST00000520539 MFAP1P55081 439 aaKnown RBP18.82■□□□□ 0.6
UBR5-207ENST00000520539 SLC26A8Q96RN1 970 aa18.82■□□□□ 0.6
UBR5-207ENST00000520539 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
UBR5-207ENST00000520539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■■■ 64.1
UBR5-207ENST00000520539 ITPRIPQ8IWB1 547 aa18.81■□□□□ 0.6
UBR5-207ENST00000520539 LUC7LQ9NQ29 371 aaKnown RBP18.8■□□□□ 0.6
UBR5-207ENST00000520539 SEPT11Q9NVA2 429 aaKnown RBP18.8■□□□□ 0.6
UBR5-207ENST00000520539 AKAP17AQ02040 695 aaKnown RBP18.8■□□□□ 0.6
UBR5-207ENST00000520539 PDCL2Q8N4E4 241 aa18.8■□□□□ 0.6
UBR5-207ENST00000520539 CFAP57Q96MR6 1250 aa18.8■□□□□ 0.6
UBR5-207ENST00000520539 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
UBR5-207ENST00000520539 GOLGA6L10A0A0M3HER8 536 aa18.8■□□□□ 0.6
UBR5-207ENST00000520539 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
UBR5-207ENST00000520539 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
UBR5-207ENST00000520539 NF2P35240 595 aa18.79■□□□□ 0.6
UBR5-207ENST00000520539 NEUROD2Q15784 382 aa18.79■□□□□ 0.6
UBR5-207ENST00000520539 MARCH6O60337 910 aa18.79■□□□□ 0.6
UBR5-207ENST00000520539 POLR3GO15318 223 aaPredicted RBP18.79■□□□□ 0.6
UBR5-207ENST00000520539 PCMTD1Q96MG8 357 aaPredicted RBP18.79■□□□□ 0.6
UBR5-207ENST00000520539 NASPP49321 788 aaPredicted RBP18.78■□□□□ 0.6
UBR5-207ENST00000520539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.78■□□□□ 0.6
UBR5-207ENST00000520539 MRE11P49959 708 aa18.78■□□□□ 0.6
UBR5-207ENST00000520539 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
UBR5-207ENST00000520539 CPLX2Q6PUV4 134 aaKnown RBP18.77■□□□□ 0.6
UBR5-207ENST00000520539 GORABQ5T7V8 394 aa18.76■□□□□ 0.59
UBR5-207ENST00000520539 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
UBR5-207ENST00000520539 KIF3BO15066 747 aa18.76■□□□□ 0.59
UBR5-207ENST00000520539 SETSIPP0DME0 302 aa18.75■□□□□ 0.59
UBR5-207ENST00000520539 NAP1L1P55209 391 aaKnown RBP18.75■□□□□ 0.59
UBR5-207ENST00000520539 PDE3BQ13370 1112 aa18.75■□□□□ 0.59
UBR5-207ENST00000520539 HSP90AB2PQ58FF8 381 aa18.75■□□□□ 0.59
UBR5-207ENST00000520539 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
UBR5-207ENST00000520539 PPM1EQ8WY54 764 aa18.75■□□□□ 0.59
UBR5-207ENST00000520539 SEPT7Q16181 437 aaKnown RBP18.75■□□□□ 0.59
UBR5-207ENST00000520539 TMF1P82094 1093 aa18.75■□□□□ 0.59
UBR5-207ENST00000520539 ENOX2Q16206 610 aaKnown RBP18.75■□□□□ 0.59
UBR5-207ENST00000520539 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
UBR5-207ENST00000520539 PIP4K2AP48426 406 aaPredicted RBP18.74■□□□□ 0.59
UBR5-207ENST00000520539 EPS15P42566 896 aa18.74■□□□□ 0.59
UBR5-207ENST00000520539 ROCK2O75116 1388 aaKnown RBP18.74■□□□□ 0.59
UBR5-207ENST00000520539 SMARCE1Q969G3 411 aa18.74■□□□□ 0.59
UBR5-207ENST00000520539 SASS6Q6UVJ0 657 aa18.74■□□□□ 0.59
UBR5-207ENST00000520539 NUCB2P80303 420 aa18.74■□□□□ 0.59
UBR5-207ENST00000520539 TRIM29Q14134 588 aa18.73■□□□□ 0.59
UBR5-207ENST00000520539 VPS53Q5VIR6 699 aa18.73■□□□□ 0.59
UBR5-207ENST00000520539 LUZP1Q86V48 1076 aa18.73■□□□□ 0.59
UBR5-207ENST00000520539 GBP2P32456 591 aaPredicted RBP18.73■□□□□ 0.59
UBR5-207ENST00000520539 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
UBR5-207ENST00000520539 CALCOCO1Q9P1Z2 691 aa18.72■□□□□ 0.59
UBR5-207ENST00000520539 FYB1O15117 783 aa18.72■□□□□ 0.59
UBR5-207ENST00000520539 STK31Q9BXU1 1019 aa18.71■□□□□ 0.59
UBR5-207ENST00000520539 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
UBR5-207ENST00000520539 ROCK1Q13464 1354 aa18.7■□□□□ 0.58
UBR5-207ENST00000520539 ARID3CA6NKF2 412 aa18.7■□□□□ 0.58
UBR5-207ENST00000520539 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
UBR5-207ENST00000520539 SSR1P43307 286 aaKnown RBP18.7■□□□□ 0.58
UBR5-207ENST00000520539 KANK1Q14678 1352 aa18.69■□□□□ 0.58
UBR5-207ENST00000520539 CCDC73Q6ZRK6 1079 aa18.69■□□□□ 0.58
UBR5-207ENST00000520539 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
UBR5-207ENST00000520539 CC2D1BQ5T0F9 858 aaKnown RBP18.69■□□□□ 0.58
UBR5-207ENST00000520539 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
UBR5-207ENST00000520539 LMOD3Q0VAK6 560 aa18.68■□□□□ 0.58
UBR5-207ENST00000520539 SEPT6Q14141 434 aa18.68■□□□□ 0.58
UBR5-207ENST00000520539 MCM3P25205 808 aa18.68■□□□□ 0.58
UBR5-207ENST00000520539 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
UBR5-207ENST00000520539 CCDC91Q7Z6B0 441 aa18.67■□□□□ 0.58
UBR5-207ENST00000520539 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
UBR5-207ENST00000520539 CCAR1Q8IX12 1150 aaKnown RBP18.67■□□□□ 0.58
UBR5-207ENST00000520539 MBD3O95983 291 aa18.67■□□□□ 0.58
UBR5-207ENST00000520539 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
UBR5-207ENST00000520539 OFD1O75665 1012 aa18.66■□□□□ 0.58
UBR5-207ENST00000520539 CHMP3Q9Y3E7 222 aa18.66■□□□□ 0.58
UBR5-207ENST00000520539 KIF2AO00139 706 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms