RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 IRF6O14896 467 aa10.06□□□□□ -0.8
CTNNA1-222ENST00000520400 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-222ENST00000520400 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
CTNNA1-222ENST00000520400 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
CTNNA1-222ENST00000520400 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
CTNNA1-222ENST00000520400 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
CTNNA1-222ENST00000520400 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
CTNNA1-222ENST00000520400 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-222ENST00000520400 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CTNNA1-222ENST00000520400 COL9A1P20849 921 aa10.03□□□□□ -0.8
CTNNA1-222ENST00000520400 PDE4DQ08499 809 aa10.03□□□□□ -0.8
CTNNA1-222ENST00000520400 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
CTNNA1-222ENST00000520400 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
CTNNA1-222ENST00000520400 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
CTNNA1-222ENST00000520400 C3orf80F5H4A9 247 aa10□□□□□ -0.81
CTNNA1-222ENST00000520400 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
CTNNA1-222ENST00000520400 PLSCR2Q9NRY7 297 aa10□□□□□ -0.81
CTNNA1-222ENST00000520400 SNPHO15079 494 aa9.99□□□□□ -0.81
CTNNA1-222ENST00000520400 PADI6Q6TGC4 694 aa9.99□□□□□ -0.81
CTNNA1-222ENST00000520400 ST18O60284 1047 aa9.98□□□□□ -0.81
CTNNA1-222ENST00000520400 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
CTNNA1-222ENST00000520400 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
CTNNA1-222ENST00000520400 NLRP7Q8WX94 980 aa9.98□□□□□ -0.81
CTNNA1-222ENST00000520400 KDM4CQ9H3R0 1056 aa9.98□□□□□ -0.81
CTNNA1-222ENST00000520400 AMHR2Q16671 573 aa9.97□□□□□ -0.81
CTNNA1-222ENST00000520400 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
CTNNA1-222ENST00000520400 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
CTNNA1-222ENST00000520400 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-222ENST00000520400 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
CTNNA1-222ENST00000520400 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
CTNNA1-222ENST00000520400 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
CTNNA1-222ENST00000520400 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
CTNNA1-222ENST00000520400 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
CTNNA1-222ENST00000520400 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
CTNNA1-222ENST00000520400 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
CTNNA1-222ENST00000520400 PRSS12P56730 875 aa9.92□□□□□ -0.82
CTNNA1-222ENST00000520400 CDCA7LQ96GN5 454 aa9.92□□□□□ -0.82
CTNNA1-222ENST00000520400 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
CTNNA1-222ENST00000520400 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
CTNNA1-222ENST00000520400 PSEN2P49810 448 aa9.9□□□□□ -0.82
CTNNA1-222ENST00000520400 PROX2Q3B8N5 592 aa9.9□□□□□ -0.82
CTNNA1-222ENST00000520400 METTL3Q86U44 580 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-222ENST00000520400 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
CTNNA1-222ENST00000520400 PLEKHG3A1L390 1219 aa9.89□□□□□ -0.83
CTNNA1-222ENST00000520400 MS4A1P11836 297 aa9.89□□□□□ -0.83
CTNNA1-222ENST00000520400 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-222ENST00000520400 CERKQ8TCT0 537 aa9.89□□□□□ -0.83
CTNNA1-222ENST00000520400 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
CTNNA1-222ENST00000520400 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-222ENST00000520400 PPP1R3GB7ZBB8 358 aa9.88□□□□□ -0.83
CTNNA1-222ENST00000520400 KCNK17Q96T54 332 aa9.88□□□□□ -0.83
CTNNA1-222ENST00000520400 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-222ENST00000520400 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
CTNNA1-222ENST00000520400 PTPREP23469 700 aa9.87□□□□□ -0.83
CTNNA1-222ENST00000520400 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-222ENST00000520400 GIGYF2Q6Y7W6 1299 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-222ENST00000520400 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
CTNNA1-222ENST00000520400 FAM163AQ96GL9 167 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-222ENST00000520400 ERBB3P21860 1342 aa9.85□□□□□ -0.83
CTNNA1-222ENST00000520400 POTEMA6NI47 508 aa9.85□□□□□ -0.83
CTNNA1-222ENST00000520400 TTLL12Q14166 644 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-222ENST00000520400 EYA1Q99502 592 aa9.85□□□□□ -0.83
CTNNA1-222ENST00000520400 EMP3P54852 163 aa9.84□□□□□ -0.83
CTNNA1-222ENST00000520400 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
CTNNA1-222ENST00000520400 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
CTNNA1-222ENST00000520400 TRIM6-TRIM34B2RNG4 842 aa9.83□□□□□ -0.84
CTNNA1-222ENST00000520400 SMAPO00193 183 aa9.83□□□□□ -0.84
CTNNA1-222ENST00000520400 NUDT18Q6ZVK8 323 aa9.82□□□□□ -0.84
CTNNA1-222ENST00000520400 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
CTNNA1-222ENST00000520400 POTEGQ6S5H5 508 aa9.81□□□□□ -0.84
CTNNA1-222ENST00000520400 OATP04181 439 aa9.8□□□□□ -0.84
CTNNA1-222ENST00000520400 TATDN2Q93075 761 aa9.8□□□□□ -0.84
CTNNA1-222ENST00000520400 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
CTNNA1-222ENST00000520400 RCCD1A6NED2 376 aa9.79□□□□□ -0.84
CTNNA1-222ENST00000520400 HS3ST6Q96QI5 342 aa9.79□□□□□ -0.84
CTNNA1-222ENST00000520400 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-222ENST00000520400 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
CTNNA1-222ENST00000520400 SSTR3P32745 418 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-222ENST00000520400 CLCN1P35523 988 aa9.78□□□□□ -0.84
CTNNA1-222ENST00000520400 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
CTNNA1-222ENST00000520400 KIAA1468Q9P260 1216 aa9.78□□□□□ -0.84
CTNNA1-222ENST00000520400 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
CTNNA1-222ENST00000520400 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-222ENST00000520400 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
CTNNA1-222ENST00000520400 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-222ENST00000520400 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
CTNNA1-222ENST00000520400 DDRGK1Q96HY6 314 aa9.73□□□□□ -0.85
CTNNA1-222ENST00000520400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 ONECUT3O60422 494 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 BEGAINQ9BUH8 593 aa9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 TMEM134Q9H6X4 195 aa9.72□□□□□ -0.85
CTNNA1-222ENST00000520400 DNAJB2P25686 324 aa9.7□□□□□ -0.86
CTNNA1-222ENST00000520400 PCDH10Q9P2E7 1040 aa9.7□□□□□ -0.86
CTNNA1-222ENST00000520400 DAXXQ9UER7 740 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-222ENST00000520400 RABGEF1Q9UJ41 708 aa9.7□□□□□ -0.86
CTNNA1-222ENST00000520400 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-222ENST00000520400 PBX2P40425 430 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms