RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-207ENST00000520168 NCOA1Q15788 1441 aa8.36□□□□□ -1.07
SDCBP-207ENST00000520168 DIP2CQ9Y2E4 1556 aa8.35□□□□□ -1.07
SDCBP-207ENST00000520168 GALR2O43603 387 aaPredicted RBP8.35□□□□□ -1.07
SDCBP-207ENST00000520168 CNTLNQ9NXG0 1405 aa8.35□□□□□ -1.07
SDCBP-207ENST00000520168 TRAPPC8Q9Y2L5 1435 aa8.35□□□□□ -1.07
SDCBP-207ENST00000520168 KIF14Q15058 1648 aa8.34□□□□□ -1.07
SDCBP-207ENST00000520168 MNX1P50219 401 aaPredicted RBP8.34□□□□□ -1.07
SDCBP-207ENST00000520168 CAMSAP1Q5T5Y3 1602 aa8.33□□□□□ -1.08
SDCBP-207ENST00000520168 ABCA6Q8N139 1617 aa8.33□□□□□ -1.08
SDCBP-207ENST00000520168 MED1Q15648 1581 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-207ENST00000520168 NPATQ14207 1427 aa8.32□□□□□ -1.08
SDCBP-207ENST00000520168 CEBPAP49715 358 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-207ENST00000520168 ESF1Q9H501 851 aaKnown RBP8.32□□□□□ -1.08
SDCBP-207ENST00000520168 PLA2R1Q13018 1463 aa8.32□□□□□ -1.08
SDCBP-207ENST00000520168 EFCAB2Q5VUJ9 269 aa8.31□□□□□ -1.08
SDCBP-207ENST00000520168 PHF12Q96QT6 1004 aa8.31□□□□□ -1.08
SDCBP-207ENST00000520168 MLH3Q9UHC1 1453 aa8.31□□□□□ -1.08
SDCBP-207ENST00000520168 ITSN2Q9NZM3 1697 aa8.3□□□□□ -1.08
SDCBP-207ENST00000520168 ARHGAP5Q13017 1502 aa8.3□□□□□ -1.08
SDCBP-207ENST00000520168 MYO3AQ8NEV4 1616 aa8.3□□□□□ -1.08
SDCBP-207ENST00000520168 CDC42BPBQ9Y5S2 1711 aa8.3□□□□□ -1.08
SDCBP-207ENST00000520168 CDK13Q14004 1512 aaKnown RBP8.29□□□□□ -1.08
SDCBP-207ENST00000520168 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-207ENST00000520168 UBAP1LF5GYI3 381 aa8.29□□□□□ -1.08
SDCBP-207ENST00000520168 PROM2Q8N271 834 aa8.29□□□□□ -1.08
SDCBP-207ENST00000520168 PREX2Q70Z35 1606 aa8.29□□□□□ -1.08
SDCBP-207ENST00000520168 KIDINS220Q9ULH0 1771 aa8.28□□□□□ -1.08
SDCBP-207ENST00000520168 PKD2Q13563 968 aa8.28□□□□□ -1.08
SDCBP-207ENST00000520168 CEP170BQ9Y4F5 1589 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-207ENST00000520168 TCOF1Q13428 1488 aaKnown RBP8.27□□□□□ -1.09
SDCBP-207ENST00000520168 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-207ENST00000520168 CPS1P31327 1500 aa8.27□□□□□ -1.09
SDCBP-207ENST00000520168 ABCC1P33527 1531 aa8.27□□□□□ -1.09
SDCBP-207ENST00000520168 CLIP1P30622 1438 aa8.27□□□□□ -1.09
SDCBP-207ENST00000520168 EEA1Q15075 1411 aa8.27□□□□□ -1.09
SDCBP-207ENST00000520168 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
SDCBP-207ENST00000520168 CLTCQ00610 1675 aaKnown RBP8.26□□□□□ -1.09
SDCBP-207ENST00000520168 FMN1Q68DA7 1419 aa8.26□□□□□ -1.09
SDCBP-207ENST00000520168 ZNF335Q9H4Z2 1342 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-207ENST00000520168 TROQ12816 1431 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-207ENST00000520168 TOM1O60784 492 aa8.24□□□□□ -1.09
SDCBP-207ENST00000520168 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
SDCBP-207ENST00000520168 PTPRKQ15262 1439 aa8.23□□□□□ -1.09
SDCBP-207ENST00000520168 AFAP1Q8N556 730 aa8.23□□□□□ -1.09
SDCBP-207ENST00000520168 LRRIQ1Q96JM4 1722 aa8.23□□□□□ -1.09
SDCBP-207ENST00000520168 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
SDCBP-207ENST00000520168 ZMYM3Q14202 1370 aa8.22□□□□□ -1.09
SDCBP-207ENST00000520168 DNMT1P26358 1616 aaKnown RBP8.21□□□□□ -1.09
SDCBP-207ENST00000520168 ADGBQ8N7X0 1667 aa8.21□□□□□ -1.09
SDCBP-207ENST00000520168 HSPA1LP34931 641 aa8.21□□□□□ -1.1
SDCBP-207ENST00000520168 OTUD5Q96G74 571 aa8.21□□□□□ -1.1
SDCBP-207ENST00000520168 MS4A3Q96HJ5 214 aa8.21□□□□□ -1.1
SDCBP-207ENST00000520168 SAMD9LQ8IVG5 1584 aa8.2□□□□□ -1.1
SDCBP-207ENST00000520168 POTEB2H3BUK9 544 aa8.2□□□□□ -1.1
SDCBP-207ENST00000520168 ASTLQ6HA08 431 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-207ENST00000520168 PLSCR2Q9NRY7 297 aa8.2□□□□□ -1.1
SDCBP-207ENST00000520168 NCKAP5LQ9HCH0 1330 aa8.2□□□□□ -1.1
SDCBP-207ENST00000520168 A2ML1A8K2U0 1454 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 SYNMO15061 1565 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 RNF17Q9BXT8 1623 aaKnown RBP8.19□□□□□ -1.1
SDCBP-207ENST00000520168 PLEKHG5O94827 1062 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
SDCBP-207ENST00000520168 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-207ENST00000520168 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 SHANK2Q9UPX8 1470 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 ATP7AQ04656 1500 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 FAM135AQ9P2D6 1515 aa8.19□□□□□ -1.1
SDCBP-207ENST00000520168 NEURL4Q96JN8 1562 aa8.18□□□□□ -1.1
SDCBP-207ENST00000520168 INO80Q9ULG1 1556 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-207ENST00000520168 DEPDC5O75140 1603 aa8.18□□□□□ -1.1
SDCBP-207ENST00000520168 RANGAP1P46060 587 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-207ENST00000520168 ATMINO43313 823 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-207ENST00000520168 SLC39A7Q92504 469 aa8.17□□□□□ -1.1
SDCBP-207ENST00000520168 CCDC61Q9Y6R9 512 aa8.17□□□□□ -1.1
SDCBP-207ENST00000520168 C7P10643 843 aa8.16□□□□□ -1.1
SDCBP-207ENST00000520168 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
SDCBP-207ENST00000520168 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
SDCBP-207ENST00000520168 VWDEQ8N2E2 1590 aa8.16□□□□□ -1.1
SDCBP-207ENST00000520168 SYCP2Q9BX26 1530 aa8.16□□□□□ -1.1
SDCBP-207ENST00000520168 ALKQ9UM73 1620 aa8.15□□□□□ -1.1
SDCBP-207ENST00000520168 A2MP01023 1474 aa8.15□□□□□ -1.1
SDCBP-207ENST00000520168 PLEKHH2Q8IVE3 1493 aa8.15□□□□□ -1.1
SDCBP-207ENST00000520168 METRNQ9UJH8 293 aa8.15□□□□□ -1.1
SDCBP-207ENST00000520168 MED14O60244 1454 aa8.14□□□□□ -1.11
SDCBP-207ENST00000520168 MIER1Q8N108 512 aa8.14□□□□□ -1.11
SDCBP-207ENST00000520168 ATP1B4Q9UN42 357 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-207ENST00000520168 ARHGAP35Q9NRY4 1499 aa8.13□□□□□ -1.11
SDCBP-207ENST00000520168 KIAA1107Q9UPP5 1409 aa8.13□□□□□ -1.11
SDCBP-207ENST00000520168 SPAG9O60271 1321 aaKnown RBP8.13□□□□□ -1.11
SDCBP-207ENST00000520168 KIF12Q96FN5 646 aa8.12□□□□□ -1.11
SDCBP-207ENST00000520168 KDM5DQ9BY66 1539 aa8.12□□□□□ -1.11
SDCBP-207ENST00000520168 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
SDCBP-207ENST00000520168 PZPP20742 1482 aa8.12□□□□□ -1.11
SDCBP-207ENST00000520168 NLRP1Q9C000 1473 aa8.12□□□□□ -1.11
SDCBP-207ENST00000520168 UGGT1Q9NYU2 1555 aa8.11□□□□□ -1.11
SDCBP-207ENST00000520168 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
SDCBP-207ENST00000520168 ANKLE2Q86XL3 938 aa8.1□□□□□ -1.11
SDCBP-207ENST00000520168 ZC3H13Q5T200 1668 aaKnown RBP8.1□□□□□ -1.11
SDCBP-207ENST00000520168 NPHP4O75161 1426 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms