RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 COL9A1P20849 921 aa5.96□□□□□ -1.46
CCNC-208ENST00000519617 ONECUT3O60422 494 aaPredicted RBP5.95□□□□□ -1.46
CCNC-208ENST00000519617 PROX2Q3B8N5 592 aa5.94□□□□□ -1.46
CCNC-208ENST00000519617 LAPTM4BQ86VI4 370 aa5.94□□□□□ -1.46
CCNC-208ENST00000519617 EPAS1Q99814 870 aa5.94□□□□□ -1.46
CCNC-208ENST00000519617 A0A0G2JS52 829 aa5.93□□□□□ -1.46
CCNC-208ENST00000519617 ANKK1Q8NFD2 765 aa5.93□□□□□ -1.46
CCNC-208ENST00000519617 C6orf132Q5T0Z8 1188 aa5.92□□□□□ -1.46
CCNC-208ENST00000519617 DPYSL4O14531 572 aa5.91□□□□□ -1.46
CCNC-208ENST00000519617 KIAA1468Q9P260 1216 aa5.91□□□□□ -1.46
CCNC-208ENST00000519617 SOWAHBA6NEL2 793 aa5.9□□□□□ -1.46
CCNC-208ENST00000519617 ITGBL1O95965 494 aaPredicted RBP5.9□□□□□ -1.46
CCNC-208ENST00000519617 ZFRQ96KR1 1074 aaKnown RBP5.9□□□□□ -1.46
CCNC-208ENST00000519617 BCAMP50895 628 aa5.89□□□□□ -1.47
CCNC-208ENST00000519617 NYAP1Q6ZVC0 841 aa5.89□□□□□ -1.47
CCNC-208ENST00000519617 BBXQ8WY36 941 aaPredicted RBP5.89□□□□□ -1.47
CCNC-208ENST00000519617 TRIM6-TRIM34B2RNG4 842 aa5.88□□□□□ -1.47
CCNC-208ENST00000519617 FAM98CQ17RN3 349 aaKnown RBP5.87□□□□□ -1.47
CCNC-208ENST00000519617 PDIA6Q15084 440 aa5.86□□□□□ -1.47
CCNC-208ENST00000519617 DDX12PQ92771 950 aa5.86□□□□□ -1.47
CCNC-208ENST00000519617 RBM33Q96EV2 1170 aaKnown RBP5.86□□□□□ -1.47
CCNC-208ENST00000519617 IRX2Q9BZI1 471 aaPredicted RBP5.86□□□□□ -1.47
CCNC-208ENST00000519617 WBP1LQ9NX94 342 aa5.86□□□□□ -1.47
CCNC-208ENST00000519617 SEPT9Q9UHD8 586 aaPredicted RBP5.86□□□□□ -1.47
CCNC-208ENST00000519617 SPDYE16A6NNV3 312 aaPredicted RBP5.85□□□□□ -1.47
CCNC-208ENST00000519617 EN1Q05925 392 aaPredicted RBP5.85□□□□□ -1.47
CCNC-208ENST00000519617 TSR3Q9UJK0 312 aaKnown RBP5.84□□□□□ -1.47
CCNC-208ENST00000519617 KCNC4Q03721 635 aa5.83□□□□□ -1.48
CCNC-208ENST00000519617 NBR1Q14596 966 aa5.83□□□□□ -1.48
CCNC-208ENST00000519617 PACS2Q86VP3 889 aa5.83□□□□□ -1.48
CCNC-208ENST00000519617 SPRYD3Q8NCJ5 442 aa5.83□□□□□ -1.48
CCNC-208ENST00000519617 LRCH3Q96II8 777 aa5.83□□□□□ -1.48
CCNC-208ENST00000519617 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.83□□□□□ -1.48
CCNC-208ENST00000519617 TSKSQ9UJT2 592 aa5.83□□□□□ -1.48
CCNC-208ENST00000519617 ARIH1Q9Y4X5 557 aaPredicted RBP5.83□□□□□ -1.48
CCNC-208ENST00000519617 MAP3K7O43318 606 aa5.82□□□□□ -1.48
CCNC-208ENST00000519617 TSR1Q2NL82 804 aaKnown RBP5.82□□□□□ -1.48
CCNC-208ENST00000519617 HPS5Q9UPZ3 1129 aa5.82□□□□□ -1.48
CCNC-208ENST00000519617 E2F4Q16254 413 aa5.81□□□□□ -1.48
CCNC-208ENST00000519617 CERKQ8TCT0 537 aa5.81□□□□□ -1.48
CCNC-208ENST00000519617 PRSS12P56730 875 aa5.8□□□□□ -1.48
CCNC-208ENST00000519617 CDCA7LQ96GN5 454 aa5.8□□□□□ -1.48
CCNC-208ENST00000519617 PRIM1P49642 420 aaKnown RBP5.79□□□□□ -1.48
CCNC-208ENST00000519617 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.79□□□□□ -1.48
CCNC-208ENST00000519617 FAM198AQ9UFP1 575 aa5.79□□□□□ -1.48
CCNC-208ENST00000519617 PPP4CP60510 307 aa5.78□□□□□ -1.48
CCNC-208ENST00000519617 SMAPO00193 183 aa5.77□□□□□ -1.49
CCNC-208ENST00000519617 TJAP1Q5JTD0 557 aa5.77□□□□□ -1.49
CCNC-208ENST00000519617 GRXCR2A6NFK2 248 aa5.76□□□□□ -1.49
CCNC-208ENST00000519617 OSBPP22059 807 aa5.76□□□□□ -1.49
CCNC-208ENST00000519617 SAMD7Q7Z3H4 446 aa5.76□□□□□ -1.49
CCNC-208ENST00000519617 TATDN2Q93075 761 aa5.76□□□□□ -1.49
CCNC-208ENST00000519617 WDR70Q9NW82 654 aa5.76□□□□□ -1.49
CCNC-208ENST00000519617 NBPF26B4DH59 902 aa5.75□□□□□ -1.49
CCNC-208ENST00000519617 C3orf80F5H4A9 247 aa5.75□□□□□ -1.49
CCNC-208ENST00000519617 RBM27Q9P2N5 1060 aaKnown RBP5.75□□□□□ -1.49
CCNC-208ENST00000519617 PNMA3Q9UL41 463 aa5.74□□□□□ -1.49
CCNC-208ENST00000519617 LAPTM4AQ15012 233 aa5.73□□□□□ -1.49
CCNC-208ENST00000519617 PAXIP1Q6ZW49 1069 aaPredicted RBP5.73□□□□□ -1.49
CCNC-208ENST00000519617 TTC13Q8NBP0 860 aa5.73□□□□□ -1.49
CCNC-208ENST00000519617 CDHR5Q9HBB8 845 aa5.73□□□□□ -1.49
CCNC-208ENST00000519617 IL21Q9HBE4 155 aa5.73□□□□□ -1.49
CCNC-208ENST00000519617 HDGFP51858 240 aaKnown RBP5.72□□□□□ -1.49
CCNC-208ENST00000519617 AMER1Q5JTC6 1135 aaPredicted RBP5.72□□□□□ -1.49
CCNC-208ENST00000519617 Q6ZNB5 142 aa5.72□□□□□ -1.49
CCNC-208ENST00000519617 NUDT18Q6ZVK8 323 aa5.72□□□□□ -1.49
CCNC-208ENST00000519617 CFAP44Q96MT7 982 aa5.72□□□□□ -1.49
CCNC-208ENST00000519617 MTRQ99707 1265 aa5.72□□□□□ -1.49
CCNC-208ENST00000519617 NPDC1Q9NQX5 325 aaPredicted RBP5.72□□□□□ -1.49
CCNC-208ENST00000519617 APLP1P51693 650 aa5.69□□□□□ -1.5
CCNC-208ENST00000519617 PPP1R18Q6NYC8 613 aa5.69□□□□□ -1.5
CCNC-208ENST00000519617 ZNF516Q92618 1163 aa5.69□□□□□ -1.5
CCNC-208ENST00000519617 NECTIN2Q92692 538 aa5.69□□□□□ -1.5
CCNC-208ENST00000519617 PRKD2Q9BZL6 878 aa5.69□□□□□ -1.5
CCNC-208ENST00000519617 V9GY48 417 aaPredicted RBP5.69□□□□□ -1.5
CCNC-208ENST00000519617 GFRA3O60609 400 aa5.68□□□□□ -1.5
CCNC-208ENST00000519617 PADI6Q6TGC4 694 aa5.68□□□□□ -1.5
CCNC-208ENST00000519617 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.68□□□□□ -1.5
CCNC-208ENST00000519617 SWT1Q5T5J6 900 aaKnown RBP5.67□□□□□ -1.5
CCNC-208ENST00000519617 SLF2Q8IX21 1173 aa5.67□□□□□ -1.5
CCNC-208ENST00000519617 EYA1Q99502 592 aa5.67□□□□□ -1.5
CCNC-208ENST00000519617 LCE2BO14633 110 aa5.66□□□□□ -1.5
CCNC-208ENST00000519617 RNF40O75150 1001 aa5.66□□□□□ -1.5
CCNC-208ENST00000519617 TRAF7Q6Q0C0 670 aa5.66□□□□□ -1.5
CCNC-208ENST00000519617 ARHGEF1Q92888 912 aaKnown RBP5.66□□□□□ -1.5
CCNC-208ENST00000519617 RTN4Q9NQC3 1192 aaKnown RBP5.66□□□□□ -1.5
CCNC-208ENST00000519617 NRG2O14511 850 aaPredicted RBP5.65□□□□□ -1.5
CCNC-208ENST00000519617 NKX2-3Q8TAU0 364 aa5.65□□□□□ -1.5
CCNC-208ENST00000519617 SLC4A3P48751 1232 aa5.64□□□□□ -1.51
CCNC-208ENST00000519617 TMUB1Q9BVT8 246 aa5.64□□□□□ -1.51
CCNC-208ENST00000519617 ZPR1O75312 459 aa5.63□□□□□ -1.51
CCNC-208ENST00000519617 GGCXP38435 758 aa5.63□□□□□ -1.51
CCNC-208ENST00000519617 MLLT3P42568 568 aaPredicted RBP5.63□□□□□ -1.51
CCNC-208ENST00000519617 PRR14Q9BWN1 585 aa5.63□□□□□ -1.51
CCNC-208ENST00000519617 COPS2P61201 443 aa5.62□□□□□ -1.51
CCNC-208ENST00000519617 PTGDRQ13258 359 aa5.62□□□□□ -1.51
CCNC-208ENST00000519617 DNAJB2P25686 324 aa5.6□□□□□ -1.51
CCNC-208ENST00000519617 RBM46Q8TBY0 533 aaKnown RBP5.6□□□□□ -1.51
CCNC-208ENST00000519617 KCNV2Q8TDN2 545 aa5.6□□□□□ -1.51
CCNC-208ENST00000519617 TSHZ2Q9NRE2 1034 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms