RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
NUDCD1-203ENST00000519607 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
NUDCD1-203ENST00000519607 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
NUDCD1-203ENST00000519607 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
NUDCD1-203ENST00000519607 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
NUDCD1-203ENST00000519607 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
NUDCD1-203ENST00000519607 MYBBP1AQ9BQG0 1328 aaKnown RBP15.28■□□□□ 0.04
NUDCD1-203ENST00000519607 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.04
NUDCD1-203ENST00000519607 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.04
NUDCD1-203ENST00000519607 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.03
NUDCD1-203ENST00000519607 MSH5O43196 834 aa15.27■□□□□ 0.03
NUDCD1-203ENST00000519607 E9PCH4 1651 aa15.25■□□□□ 0.03
NUDCD1-203ENST00000519607 CCDC136Q96JN2 1154 aa15.24■□□□□ 0.03
NUDCD1-203ENST00000519607 TRPM1Q7Z4N2 1603 aa15.24■□□□□ 0.03
NUDCD1-203ENST00000519607 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
NUDCD1-203ENST00000519607 MAST1Q9Y2H9 1570 aa15.23■□□□□ 0.03
NUDCD1-203ENST00000519607 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
NUDCD1-203ENST00000519607 ARHGAP5Q13017 1502 aa15.21■□□□□ 0.03
NUDCD1-203ENST00000519607 UNC13BO14795 1591 aa15.21■□□□□ 0.03
NUDCD1-203ENST00000519607 PLEKHH2Q8IVE3 1493 aa15.21■□□□□ 0.03
NUDCD1-203ENST00000519607 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
NUDCD1-203ENST00000519607 SYCP2Q9BX26 1530 aa15.2■□□□□ 0.02
NUDCD1-203ENST00000519607 WASHC2CQ9Y4E1 1318 aa15.19■□□□□ 0.02
NUDCD1-203ENST00000519607 LAMC1P11047 1609 aa15.19■□□□□ 0.02
NUDCD1-203ENST00000519607 MYO5CQ9NQX4 1742 aa15.19■□□□□ 0.02
NUDCD1-203ENST00000519607 RGL3Q3MIN7 710 aa15.18■□□□□ 0.02
NUDCD1-203ENST00000519607 EIF2AK4Q9P2K8 1649 aaKnown RBP15.18■□□□□ 0.02
NUDCD1-203ENST00000519607 PDE3BQ13370 1112 aa15.18■□□□□ 0.02
NUDCD1-203ENST00000519607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■■□□□ 11.7
NUDCD1-203ENST00000519607 PLXNC1O60486 1568 aa15.18■□□□□ 0.02
NUDCD1-203ENST00000519607 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
NUDCD1-203ENST00000519607 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
NUDCD1-203ENST00000519607 MYT1LQ9UL68 1186 aa15.17■□□□□ 0.02
NUDCD1-203ENST00000519607 PARD3Q8TEW0 1356 aa15.16■□□□□ 0.02
NUDCD1-203ENST00000519607 TTC37Q6PGP7 1564 aa15.16■□□□□ 0.02
NUDCD1-203ENST00000519607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.022e-7■■■■■ 47.7
NUDCD1-203ENST00000519607 CHD1O14646 1710 aa15.15■□□□□ 0.02
NUDCD1-203ENST00000519607 DUOX2Q9NRD8 1548 aa15.15■□□□□ 0.02
NUDCD1-203ENST00000519607 PRDM15P57071 1507 aaPredicted RBP15.14■□□□□ 0.01
NUDCD1-203ENST00000519607 A2MP01023 1474 aa15.14■□□□□ 0.01
NUDCD1-203ENST00000519607 TMF1P82094 1093 aa15.13■□□□□ 0.01
NUDCD1-203ENST00000519607 NBPF1Q3BBV0 1214 aa15.13■□□□□ 0.01
NUDCD1-203ENST00000519607 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
NUDCD1-203ENST00000519607 SHROOM2Q13796 1616 aa15.13■□□□□ 0.01
NUDCD1-203ENST00000519607 ATP10AO60312 1499 aa15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 PLA2R1Q13018 1463 aa15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 ERBINQ96RT1 1412 aa15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 PER1O15534 1290 aaPredicted RBP15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 RRP1P56182 461 aaKnown RBP15.12■□□□□ 0.01
NUDCD1-203ENST00000519607 INSRP06213 1382 aa15.11■□□□□ 0.01
NUDCD1-203ENST00000519607 SENP3-EIF4A1A0A087X0R7 540 aa15.11■□□□□ 0.01
NUDCD1-203ENST00000519607 ANP32AP39687 249 aaKnown RBP15.11■□□□□ 0.01
NUDCD1-203ENST00000519607 ZMYM4Q5VZL5 1548 aa15.1■□□□□ 0.01
NUDCD1-203ENST00000519607 NOP58Q9Y2X3 529 aaKnown RBP15.09■□□□□ 0.01
NUDCD1-203ENST00000519607 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
NUDCD1-203ENST00000519607 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
NUDCD1-203ENST00000519607 TESK2Q96S53 571 aa15.08■□□□□ 0
NUDCD1-203ENST00000519607 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
NUDCD1-203ENST00000519607 PANK3Q9H999 370 aa15.07■□□□□ 0
NUDCD1-203ENST00000519607 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
NUDCD1-203ENST00000519607 SALL2Q9Y467 1007 aaPredicted RBP15.06■□□□□ 0
NUDCD1-203ENST00000519607 PLCH2O75038 1416 aa15.06■□□□□ 0
NUDCD1-203ENST00000519607 STAC3Q96MF2 364 aa15.06■□□□□ 0
NUDCD1-203ENST00000519607 CDCA8Q53HL2 280 aa15.04■□□□□ -0
NUDCD1-203ENST00000519607 RNF17Q9BXT8 1623 aaKnown RBP15.03■□□□□ -0
NUDCD1-203ENST00000519607 TCERG1O14776 1098 aaKnown RBP15.03■□□□□ -0
NUDCD1-203ENST00000519607 IPO9Q96P70 1041 aaKnown RBP15.03■□□□□ -0
NUDCD1-203ENST00000519607 BLMP54132 1417 aaPredicted RBP15.03■□□□□ -0
NUDCD1-203ENST00000519607 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
NUDCD1-203ENST00000519607 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
NUDCD1-203ENST00000519607 ABCC1P33527 1531 aa15.01□□□□□ -0.01
NUDCD1-203ENST00000519607 ZCCHC11Q5TAX3 1644 aaKnown RBP15.01□□□□□ -0.01
NUDCD1-203ENST00000519607 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
NUDCD1-203ENST00000519607 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
NUDCD1-203ENST00000519607 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
NUDCD1-203ENST00000519607 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
NUDCD1-203ENST00000519607 BCL11AQ9H165 835 aa14.99□□□□□ -0.01
NUDCD1-203ENST00000519607 CEP152O94986 1710 aa14.98□□□□□ -0.01
NUDCD1-203ENST00000519607 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
NUDCD1-203ENST00000519607 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
NUDCD1-203ENST00000519607 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
NUDCD1-203ENST00000519607 MADDQ8WXG6 1647 aa14.98□□□□□ -0.01
NUDCD1-203ENST00000519607 MS4A1P11836 297 aa14.97□□□□□ -0.01
NUDCD1-203ENST00000519607 TRPM2O94759 1503 aa14.97□□□□□ -0.01
NUDCD1-203ENST00000519607 SPHKAPQ2M3C7 1700 aa14.97□□□□□ -0.01
NUDCD1-203ENST00000519607 SLC24A1O60721 1099 aa14.97□□□□□ -0.01
NUDCD1-203ENST00000519607 WDR43Q15061 677 aaKnown RBP eCLIP14.97□□□□□ -0.01
NUDCD1-203ENST00000519607 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
NUDCD1-203ENST00000519607 ARAP3Q8WWN8 1544 aa14.96□□□□□ -0.02
NUDCD1-203ENST00000519607 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.02
NUDCD1-203ENST00000519607 KANK1Q14678 1352 aa14.96□□□□□ -0.02
NUDCD1-203ENST00000519607 SCAF11Q99590 1463 aaKnown RBP14.95□□□□□ -0.02
NUDCD1-203ENST00000519607 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
NUDCD1-203ENST00000519607 SYNMO15061 1565 aa14.95□□□□□ -0.02
NUDCD1-203ENST00000519607 WDR7Q9Y4E6 1490 aa14.95□□□□□ -0.02
NUDCD1-203ENST00000519607 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
NUDCD1-203ENST00000519607 ADAMTS8Q9UP79 889 aa14.94□□□□□ -0.02
NUDCD1-203ENST00000519607 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms