RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
LINC01339-203ENST00000519336 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
LINC01339-203ENST00000519336 NUDT7P0C024 238 aa9.7□□□□□ -0.86
LINC01339-203ENST00000519336 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
LINC01339-203ENST00000519336 KHSRPQ92945 711 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC01339-203ENST00000519336 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
LINC01339-203ENST00000519336 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
LINC01339-203ENST00000519336 FOSBP53539 338 aa9.67□□□□□ -0.86
LINC01339-203ENST00000519336 FAM161AQ3B820 660 aa9.67□□□□□ -0.86
LINC01339-203ENST00000519336 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
LINC01339-203ENST00000519336 ZDHHC16Q969W1 377 aa9.67□□□□□ -0.86
LINC01339-203ENST00000519336 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
LINC01339-203ENST00000519336 POTEJP0CG39 1038 aa9.66□□□□□ -0.86
LINC01339-203ENST00000519336 MDM2Q00987 491 aaPredicted RBP9.66□□□□□ -0.86
LINC01339-203ENST00000519336 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
LINC01339-203ENST00000519336 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
LINC01339-203ENST00000519336 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
LINC01339-203ENST00000519336 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
LINC01339-203ENST00000519336 CLCN1P35523 988 aa9.64□□□□□ -0.87
LINC01339-203ENST00000519336 PADI6Q6TGC4 694 aa9.64□□□□□ -0.87
LINC01339-203ENST00000519336 REPIN1Q9BWE0 567 aaKnown RBP9.64□□□□□ -0.87
LINC01339-203ENST00000519336 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
LINC01339-203ENST00000519336 MS4A1P11836 297 aa9.63□□□□□ -0.87
LINC01339-203ENST00000519336 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
LINC01339-203ENST00000519336 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
LINC01339-203ENST00000519336 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
LINC01339-203ENST00000519336 PHOX2BQ99453 314 aa9.62□□□□□ -0.87
LINC01339-203ENST00000519336 GPCPD1Q9NPB8 672 aa9.62□□□□□ -0.87
LINC01339-203ENST00000519336 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
LINC01339-203ENST00000519336 SUPT5HO00267 1087 aaKnown RBP9.61□□□□□ -0.87
LINC01339-203ENST00000519336 OATP04181 439 aa9.61□□□□□ -0.87
LINC01339-203ENST00000519336 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
LINC01339-203ENST00000519336 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
LINC01339-203ENST00000519336 GPR153Q6NV75 609 aa9.6□□□□□ -0.87
LINC01339-203ENST00000519336 METTL3Q86U44 580 aaKnown RBP9.59□□□□□ -0.87
LINC01339-203ENST00000519336 LHX6Q9UPM6 363 aa9.59□□□□□ -0.87
LINC01339-203ENST00000519336 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
LINC01339-203ENST00000519336 PPP4R3BQ5MIZ7 849 aa9.58□□□□□ -0.88
LINC01339-203ENST00000519336 PRSS12P56730 875 aa9.57□□□□□ -0.88
LINC01339-203ENST00000519336 PCMTD1Q96MG8 357 aaPredicted RBP9.57□□□□□ -0.88
LINC01339-203ENST00000519336 ADGRG1Q9Y653 693 aa9.57□□□□□ -0.88
LINC01339-203ENST00000519336 PXYLP1Q8TE99 480 aa9.56□□□□□ -0.88
LINC01339-203ENST00000519336 CDCA7LQ96GN5 454 aa9.56□□□□□ -0.88
LINC01339-203ENST00000519336 BEGAINQ9BUH8 593 aa9.55□□□□□ -0.88
LINC01339-203ENST00000519336 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
LINC01339-203ENST00000519336 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
LINC01339-203ENST00000519336 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
LINC01339-203ENST00000519336 COL9A1P20849 921 aa9.53□□□□□ -0.88
LINC01339-203ENST00000519336 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
LINC01339-203ENST00000519336 PSDA5PKW4 1024 aaPredicted RBP9.52□□□□□ -0.89
LINC01339-203ENST00000519336 SNPHO15079 494 aa9.52□□□□□ -0.89
LINC01339-203ENST00000519336 PTPREP23469 700 aa9.52□□□□□ -0.89
LINC01339-203ENST00000519336 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
LINC01339-203ENST00000519336 FAM217BQ9NTX9 383 aaPredicted RBP9.52□□□□□ -0.89
LINC01339-203ENST00000519336 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
LINC01339-203ENST00000519336 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
LINC01339-203ENST00000519336 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
LINC01339-203ENST00000519336 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
LINC01339-203ENST00000519336 POLR3EQ9NVU0 708 aa9.5□□□□□ -0.89
LINC01339-203ENST00000519336 FAM198AQ9UFP1 575 aa9.49□□□□□ -0.89
LINC01339-203ENST00000519336 PPP1R3GB7ZBB8 358 aa9.48□□□□□ -0.89
LINC01339-203ENST00000519336 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
LINC01339-203ENST00000519336 FLIIQ13045 1269 aa9.47□□□□□ -0.89
LINC01339-203ENST00000519336 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
LINC01339-203ENST00000519336 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
LINC01339-203ENST00000519336 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
LINC01339-203ENST00000519336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.46□□□□□ -0.9
LINC01339-203ENST00000519336 HOXB1P14653 301 aaPredicted RBP9.46□□□□□ -0.9
LINC01339-203ENST00000519336 PACS2Q86VP3 889 aa9.46□□□□□ -0.9
LINC01339-203ENST00000519336 KCNK17Q96T54 332 aa9.46□□□□□ -0.9
LINC01339-203ENST00000519336 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
LINC01339-203ENST00000519336 NBPF26B4DH59 902 aa9.45□□□□□ -0.9
LINC01339-203ENST00000519336 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
LINC01339-203ENST00000519336 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
LINC01339-203ENST00000519336 ARXQ96QS3 562 aa9.44□□□□□ -0.9
LINC01339-203ENST00000519336 EYA1Q99502 592 aa9.44□□□□□ -0.9
LINC01339-203ENST00000519336 DDX11L8A8MPP1 907 aa9.43□□□□□ -0.9
LINC01339-203ENST00000519336 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
LINC01339-203ENST00000519336 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
LINC01339-203ENST00000519336 TATDN2Q93075 761 aa9.43□□□□□ -0.9
LINC01339-203ENST00000519336 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
LINC01339-203ENST00000519336 SMAPO00193 183 aa9.42□□□□□ -0.9
LINC01339-203ENST00000519336 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
LINC01339-203ENST00000519336 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
LINC01339-203ENST00000519336 DNAJB2P25686 324 aa9.41□□□□□ -0.9
LINC01339-203ENST00000519336 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
LINC01339-203ENST00000519336 DIXDC1Q155Q3 683 aa9.4□□□□□ -0.9
LINC01339-203ENST00000519336 NUTM1Q86Y26 1132 aa9.4□□□□□ -0.9
LINC01339-203ENST00000519336 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
LINC01339-203ENST00000519336 ERBB3P21860 1342 aa9.38□□□□□ -0.91
LINC01339-203ENST00000519336 UBTFP17480 764 aaKnown RBP9.38□□□□□ -0.91
LINC01339-203ENST00000519336 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
LINC01339-203ENST00000519336 RDH13Q8NBN7 331 aa9.38□□□□□ -0.91
LINC01339-203ENST00000519336 KIAA1468Q9P260 1216 aa9.38□□□□□ -0.91
LINC01339-203ENST00000519336 CD46P15529 392 aa9.37□□□□□ -0.91
LINC01339-203ENST00000519336 PSEN2P49810 448 aa9.37□□□□□ -0.91
LINC01339-203ENST00000519336 SPIRE2Q8WWL2 714 aa9.37□□□□□ -0.91
LINC01339-203ENST00000519336 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
LINC01339-203ENST00000519336 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
LINC01339-203ENST00000519336 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms