RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 EMP3P54852 163 aa9.39□□□□□ -0.91
LINC00534-201ENST00000517400 PTGDRQ13258 359 aa9.39□□□□□ -0.91
LINC00534-201ENST00000517400 ZNF710Q8N1W2 664 aa9.39□□□□□ -0.91
LINC00534-201ENST00000517400 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
LINC00534-201ENST00000517400 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.911e-7■■□□□ 14.5
LINC00534-201ENST00000517400 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
LINC00534-201ENST00000517400 MAP3K7O43318 606 aa9.36□□□□□ -0.91
LINC00534-201ENST00000517400 HS3ST6Q96QI5 342 aa9.36□□□□□ -0.91
LINC00534-201ENST00000517400 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
LINC00534-201ENST00000517400 IRF6O14896 467 aa9.35□□□□□ -0.91
LINC00534-201ENST00000517400 TRIM66O15016 1216 aa9.35□□□□□ -0.91
LINC00534-201ENST00000517400 NEUROD2Q15784 382 aa9.35□□□□□ -0.91
LINC00534-201ENST00000517400 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
LINC00534-201ENST00000517400 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
LINC00534-201ENST00000517400 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
LINC00534-201ENST00000517400 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
LINC00534-201ENST00000517400 FECHP22830 423 aa9.34□□□□□ -0.91
LINC00534-201ENST00000517400 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
LINC00534-201ENST00000517400 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
LINC00534-201ENST00000517400 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
LINC00534-201ENST00000517400 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
LINC00534-201ENST00000517400 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
LINC00534-201ENST00000517400 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
LINC00534-201ENST00000517400 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
LINC00534-201ENST00000517400 C6orf132Q5T0Z8 1188 aa9.32□□□□□ -0.92
LINC00534-201ENST00000517400 CERKQ8TCT0 537 aa9.31□□□□□ -0.92
LINC00534-201ENST00000517400 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
LINC00534-201ENST00000517400 PDE4DQ08499 809 aa9.3□□□□□ -0.92
LINC00534-201ENST00000517400 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
LINC00534-201ENST00000517400 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
LINC00534-201ENST00000517400 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
LINC00534-201ENST00000517400 AMHR2Q16671 573 aa9.27□□□□□ -0.93
LINC00534-201ENST00000517400 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
LINC00534-201ENST00000517400 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
LINC00534-201ENST00000517400 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
LINC00534-201ENST00000517400 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
LINC00534-201ENST00000517400 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
LINC00534-201ENST00000517400 TTC13Q8NBP0 860 aa9.24□□□□□ -0.93
LINC00534-201ENST00000517400 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
LINC00534-201ENST00000517400 ERBB3P21860 1342 aa9.24□□□□□ -0.93
LINC00534-201ENST00000517400 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
LINC00534-201ENST00000517400 PTPREP23469 700 aa9.21□□□□□ -0.94
LINC00534-201ENST00000517400 PRSS12P56730 875 aa9.21□□□□□ -0.94
LINC00534-201ENST00000517400 PADI6Q6TGC4 694 aa9.21□□□□□ -0.94
LINC00534-201ENST00000517400 OATP04181 439 aa9.2□□□□□ -0.94
LINC00534-201ENST00000517400 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
LINC00534-201ENST00000517400 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
LINC00534-201ENST00000517400 PPP1R3GB7ZBB8 358 aa9.19□□□□□ -0.94
LINC00534-201ENST00000517400 COL9A1P20849 921 aa9.19□□□□□ -0.94
LINC00534-201ENST00000517400 ADGRG1Q9Y653 693 aa9.18□□□□□ -0.94
LINC00534-201ENST00000517400 METTL3Q86U44 580 aaKnown RBP9.17□□□□□ -0.94
LINC00534-201ENST00000517400 ZNF687Q8N1G0 1237 aa9.17□□□□□ -0.94
LINC00534-201ENST00000517400 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
LINC00534-201ENST00000517400 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
LINC00534-201ENST00000517400 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
LINC00534-201ENST00000517400 PXYLP1Q8TE99 480 aa9.16□□□□□ -0.94
LINC00534-201ENST00000517400 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
LINC00534-201ENST00000517400 TMUB1Q9BVT8 246 aa9.16□□□□□ -0.94
LINC00534-201ENST00000517400 CLCN1P35523 988 aa9.15□□□□□ -0.94
LINC00534-201ENST00000517400 FAM161AQ3B820 660 aa9.15□□□□□ -0.94
LINC00534-201ENST00000517400 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
LINC00534-201ENST00000517400 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
LINC00534-201ENST00000517400 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
LINC00534-201ENST00000517400 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
LINC00534-201ENST00000517400 GPCPD1Q9NPB8 672 aa9.14□□□□□ -0.95
LINC00534-201ENST00000517400 FAM198AQ9UFP1 575 aa9.14□□□□□ -0.95
LINC00534-201ENST00000517400 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
LINC00534-201ENST00000517400 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
LINC00534-201ENST00000517400 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
LINC00534-201ENST00000517400 TSKSQ9UJT2 592 aa9.13□□□□□ -0.95
LINC00534-201ENST00000517400 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
LINC00534-201ENST00000517400 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
LINC00534-201ENST00000517400 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
LINC00534-201ENST00000517400 EYA1Q99502 592 aa9.11□□□□□ -0.95
LINC00534-201ENST00000517400 PLEKHG3A1L390 1219 aa9.1□□□□□ -0.95
LINC00534-201ENST00000517400 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
LINC00534-201ENST00000517400 MS4A1P11836 297 aa9.1□□□□□ -0.95
LINC00534-201ENST00000517400 PACS2Q86VP3 889 aa9.1□□□□□ -0.95
LINC00534-201ENST00000517400 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
LINC00534-201ENST00000517400 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
LINC00534-201ENST00000517400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
LINC00534-201ENST00000517400 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
LINC00534-201ENST00000517400 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
LINC00534-201ENST00000517400 PBX2P40425 430 aa9.08□□□□□ -0.96
LINC00534-201ENST00000517400 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
LINC00534-201ENST00000517400 TATDN2Q93075 761 aa9.08□□□□□ -0.96
LINC00534-201ENST00000517400 SLC4A5Q9BY07 1137 aa9.08□□□□□ -0.96
LINC00534-201ENST00000517400 FAM217BQ9NTX9 383 aaPredicted RBP9.08□□□□□ -0.96
LINC00534-201ENST00000517400 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
LINC00534-201ENST00000517400 PSEN2P49810 448 aa9.07□□□□□ -0.96
LINC00534-201ENST00000517400 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
LINC00534-201ENST00000517400 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
LINC00534-201ENST00000517400 NLRP7Q8WX94 980 aa9.06□□□□□ -0.96
LINC00534-201ENST00000517400 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
LINC00534-201ENST00000517400 NISCHQ9Y2I1 1504 aa9.05□□□□□ -0.96
LINC00534-201ENST00000517400 GOPCQ9HD26 462 aa9.05□□□□□ -0.96
LINC00534-201ENST00000517400 DNAJB2P25686 324 aa9.04□□□□□ -0.96
LINC00534-201ENST00000517400 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
LINC00534-201ENST00000517400 RABGEF1Q9UJ41 708 aa9.04□□□□□ -0.96
LINC00534-201ENST00000517400 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms