RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 MDM2Q00987 491 aaPredicted RBP9.88□□□□□ -0.83
RNU6-943P-201ENST00000516960 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
RNU6-943P-201ENST00000516960 BEGAINQ9BUH8 593 aa9.87□□□□□ -0.83
RNU6-943P-201ENST00000516960 MICALL2Q8IY33 904 aa9.86□□□□□ -0.83
RNU6-943P-201ENST00000516960 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
RNU6-943P-201ENST00000516960 PATL2C9JE40 543 aaKnown RBP9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 UPF1Q92900 1129 aaKnown RBP eCLIP9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 ZNF428Q96B54 188 aa9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 PHF12Q96QT6 1004 aa9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 SNRKQ9NRH2 765 aa9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 SHROOM4Q9ULL8 1493 aa9.85□□□□□ -0.83
RNU6-943P-201ENST00000516960 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNU6-943P-201ENST00000516960 IGSF3O75054 1194 aa9.83□□□□□ -0.84
RNU6-943P-201ENST00000516960 DPY19L2Q6NUT2 758 aa9.83□□□□□ -0.84
RNU6-943P-201ENST00000516960 TRPC6Q9Y210 931 aa9.83□□□□□ -0.84
RNU6-943P-201ENST00000516960 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
RNU6-943P-201ENST00000516960 E9PSI1 815 aa9.82□□□□□ -0.84
RNU6-943P-201ENST00000516960 TBC1D12O60347 775 aa9.82□□□□□ -0.84
RNU6-943P-201ENST00000516960 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
RNU6-943P-201ENST00000516960 MYSM1Q5VVJ2 828 aa9.81□□□□□ -0.84
RNU6-943P-201ENST00000516960 CALR3Q96L12 384 aaKnown RBP9.81□□□□□ -0.84
RNU6-943P-201ENST00000516960 RFC5P40937 340 aa9.8□□□□□ -0.84
RNU6-943P-201ENST00000516960 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
RNU6-943P-201ENST00000516960 CLK2P49760 499 aaKnown RBP9.79□□□□□ -0.84
RNU6-943P-201ENST00000516960 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
RNU6-943P-201ENST00000516960 POTEDQ86YR6 584 aa9.79□□□□□ -0.84
RNU6-943P-201ENST00000516960 PHOX2BQ99453 314 aa9.79□□□□□ -0.84
RNU6-943P-201ENST00000516960 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
RNU6-943P-201ENST00000516960 KIF3CO14782 793 aa9.78□□□□□ -0.84
RNU6-943P-201ENST00000516960 GDPD2Q9HCC8 539 aa9.78□□□□□ -0.84
RNU6-943P-201ENST00000516960 KCNA1Q09470 495 aa9.77□□□□□ -0.85
RNU6-943P-201ENST00000516960 EVI5O60447 810 aa9.76□□□□□ -0.85
RNU6-943P-201ENST00000516960 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
RNU6-943P-201ENST00000516960 BRD1O95696 1058 aa9.75□□□□□ -0.85
RNU6-943P-201ENST00000516960 TIE1P35590 1138 aa9.75□□□□□ -0.85
RNU6-943P-201ENST00000516960 NPDC1Q9NQX5 325 aaPredicted RBP9.75□□□□□ -0.85
RNU6-943P-201ENST00000516960 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
RNU6-943P-201ENST00000516960 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
RNU6-943P-201ENST00000516960 GLMNQ92990 594 aa9.74□□□□□ -0.85
RNU6-943P-201ENST00000516960 CDHR5Q9HBB8 845 aa9.74□□□□□ -0.85
RNU6-943P-201ENST00000516960 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
RNU6-943P-201ENST00000516960 ABL2P42684 1182 aa9.73□□□□□ -0.85
RNU6-943P-201ENST00000516960 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
RNU6-943P-201ENST00000516960 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
RNU6-943P-201ENST00000516960 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
RNU6-943P-201ENST00000516960 PBXIP1Q96AQ6 731 aa9.72□□□□□ -0.85
RNU6-943P-201ENST00000516960 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
RNU6-943P-201ENST00000516960 PPP2R2DQ66LE6 453 aa9.71□□□□□ -0.86
RNU6-943P-201ENST00000516960 TMEM121BQ9BXQ6 578 aaPredicted RBP9.71□□□□□ -0.86
RNU6-943P-201ENST00000516960 USTQ9Y2C2 406 aa9.71□□□□□ -0.86
RNU6-943P-201ENST00000516960 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
RNU6-943P-201ENST00000516960 G3V3G9 751 aa9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 MAP3K7O43318 606 aa9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 OATP04181 439 aa9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 NLRP7Q8WX94 980 aa9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 AMOTL2Q9Y2J4 779 aa9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
RNU6-943P-201ENST00000516960 METTL3Q86U44 580 aaKnown RBP9.68□□□□□ -0.86
RNU6-943P-201ENST00000516960 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
RNU6-943P-201ENST00000516960 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
RNU6-943P-201ENST00000516960 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
RNU6-943P-201ENST00000516960 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
RNU6-943P-201ENST00000516960 EPAS1Q99814 870 aa9.67□□□□□ -0.86
RNU6-943P-201ENST00000516960 SOCS7O14512 581 aa9.66□□□□□ -0.86
RNU6-943P-201ENST00000516960 RFX1P22670 979 aa9.66□□□□□ -0.86
RNU6-943P-201ENST00000516960 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
RNU6-943P-201ENST00000516960 RIC3Q7Z5B4 369 aa9.66□□□□□ -0.86
RNU6-943P-201ENST00000516960 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
RNU6-943P-201ENST00000516960 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
RNU6-943P-201ENST00000516960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.64□□□□□ -0.87
RNU6-943P-201ENST00000516960 PHF14O94880 888 aa9.64□□□□□ -0.87
RNU6-943P-201ENST00000516960 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
RNU6-943P-201ENST00000516960 ANO8Q9HCE9 1232 aaPredicted RBP9.64□□□□□ -0.87
RNU6-943P-201ENST00000516960 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
RNU6-943P-201ENST00000516960 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
RNU6-943P-201ENST00000516960 IVNS1ABPQ9Y6Y0 642 aa9.63□□□□□ -0.87
RNU6-943P-201ENST00000516960 TUSC1Q2TAM9 212 aa9.62□□□□□ -0.87
RNU6-943P-201ENST00000516960 MYT1LQ9UL68 1186 aa9.62□□□□□ -0.87
RNU6-943P-201ENST00000516960 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNU6-943P-201ENST00000516960 SRPK2P78362 688 aaKnown RBP9.6□□□□□ -0.87
RNU6-943P-201ENST00000516960 TSR1Q2NL82 804 aaKnown RBP9.6□□□□□ -0.87
RNU6-943P-201ENST00000516960 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
RNU6-943P-201ENST00000516960 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
RNU6-943P-201ENST00000516960 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
RNU6-943P-201ENST00000516960 SPTLC1O15269 473 aa9.59□□□□□ -0.87
RNU6-943P-201ENST00000516960 AP1G2O75843 785 aa9.59□□□□□ -0.87
RNU6-943P-201ENST00000516960 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
RNU6-943P-201ENST00000516960 CARNS1A5YM72 827 aa9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 HMGB1P09429 215 aaKnown RBP9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 TMEM92Q6UXU6 159 aa9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 SLAIN1Q8ND83 568 aa9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 PTCD2Q8WV60 388 aaKnown RBP9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
RNU6-943P-201ENST00000516960 CSPP1Q1MSJ5 1256 aa9.57□□□□□ -0.88
RNU6-943P-201ENST00000516960 PADI6Q6TGC4 694 aa9.57□□□□□ -0.88
RNU6-943P-201ENST00000516960 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms