RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 DPYSL4O14531 572 aa7.28□□□□□ -1.24
SNORA40.15-201ENST00000516884 ONECUT3O60422 494 aaPredicted RBP7.28□□□□□ -1.24
SNORA40.15-201ENST00000516884 PROX2Q3B8N5 592 aa7.28□□□□□ -1.24
SNORA40.15-201ENST00000516884 PTPN5P54829 565 aa7.27□□□□□ -1.25
SNORA40.15-201ENST00000516884 PDIA6Q15084 440 aa7.26□□□□□ -1.25
SNORA40.15-201ENST00000516884 LAPTM4BQ86VI4 370 aa7.26□□□□□ -1.25
SNORA40.15-201ENST00000516884 RGS20O76081 388 aa7.25□□□□□ -1.25
SNORA40.15-201ENST00000516884 C6orf132Q5T0Z8 1188 aa7.25□□□□□ -1.25
SNORA40.15-201ENST00000516884 ARIH1Q9Y4X5 557 aaPredicted RBP7.25□□□□□ -1.25
SNORA40.15-201ENST00000516884 GOLGA8CPA6NN73 597 aa7.24□□□□□ -1.25
SNORA40.15-201ENST00000516884 ITGBL1O95965 494 aaPredicted RBP7.23□□□□□ -1.25
SNORA40.15-201ENST00000516884 A0A0G2JS52 829 aa7.22□□□□□ -1.25
SNORA40.15-201ENST00000516884 SOWAHBA6NEL2 793 aa7.22□□□□□ -1.25
SNORA40.15-201ENST00000516884 TRIM6-TRIM34B2RNG4 842 aa7.22□□□□□ -1.25
SNORA40.15-201ENST00000516884 EN1Q05925 392 aaPredicted RBP7.22□□□□□ -1.25
SNORA40.15-201ENST00000516884 ANKK1Q8NFD2 765 aa7.22□□□□□ -1.25
SNORA40.15-201ENST00000516884 KIAA1468Q9P260 1216 aa7.22□□□□□ -1.25
SNORA40.15-201ENST00000516884 SPDYE16A6NNV3 312 aaPredicted RBP7.21□□□□□ -1.26
SNORA40.15-201ENST00000516884 SPRYD3Q8NCJ5 442 aa7.2□□□□□ -1.26
SNORA40.15-201ENST00000516884 DDX12PQ92771 950 aa7.2□□□□□ -1.26
SNORA40.15-201ENST00000516884 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
SNORA40.15-201ENST00000516884 AMER1Q5JTC6 1135 aaPredicted RBP7.19□□□□□ -1.26
SNORA40.15-201ENST00000516884 NYAP1Q6ZVC0 841 aa7.19□□□□□ -1.26
SNORA40.15-201ENST00000516884 BCAMP50895 628 aa7.18□□□□□ -1.26
SNORA40.15-201ENST00000516884 FAM98CQ17RN3 349 aaKnown RBP7.18□□□□□ -1.26
SNORA40.15-201ENST00000516884 SEPT9Q9UHD8 586 aaPredicted RBP7.17□□□□□ -1.26
SNORA40.15-201ENST00000516884 PRIM1P49642 420 aaKnown RBP7.16□□□□□ -1.26
SNORA40.15-201ENST00000516884 NBR1Q14596 966 aa7.16□□□□□ -1.26
SNORA40.15-201ENST00000516884 E2F4Q16254 413 aa7.16□□□□□ -1.26
SNORA40.15-201ENST00000516884 TSR1Q2NL82 804 aaKnown RBP7.16□□□□□ -1.26
SNORA40.15-201ENST00000516884 RBM33Q96EV2 1170 aaKnown RBP7.16□□□□□ -1.26
SNORA40.15-201ENST00000516884 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
SNORA40.15-201ENST00000516884 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
SNORA40.15-201ENST00000516884 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.15□□□□□ -1.26
SNORA40.15-201ENST00000516884 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
SNORA40.15-201ENST00000516884 MAP3K7O43318 606 aa7.13□□□□□ -1.27
SNORA40.15-201ENST00000516884 CERKQ8TCT0 537 aa7.13□□□□□ -1.27
SNORA40.15-201ENST00000516884 FAM198AQ9UFP1 575 aa7.13□□□□□ -1.27
SNORA40.15-201ENST00000516884 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
SNORA40.15-201ENST00000516884 OSBPP22059 807 aa7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 PRSS12P56730 875 aa7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 PACS2Q86VP3 889 aa7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 CDCA7LQ96GN5 454 aa7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 LRCH3Q96II8 777 aa7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 RBM27Q9P2N5 1060 aaKnown RBP7.11□□□□□ -1.27
SNORA40.15-201ENST00000516884 C3orf80F5H4A9 247 aa7.09□□□□□ -1.27
SNORA40.15-201ENST00000516884 PAXIP1Q6ZW49 1069 aaPredicted RBP7.09□□□□□ -1.27
SNORA40.15-201ENST00000516884 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
SNORA40.15-201ENST00000516884 KCNC4Q03721 635 aa7.08□□□□□ -1.28
SNORA40.15-201ENST00000516884 TTC13Q8NBP0 860 aa7.08□□□□□ -1.28
SNORA40.15-201ENST00000516884 CDHR5Q9HBB8 845 aa7.07□□□□□ -1.28
SNORA40.15-201ENST00000516884 GRXCR2A6NFK2 248 aa7.06□□□□□ -1.28
SNORA40.15-201ENST00000516884 TATDN2Q93075 761 aa7.06□□□□□ -1.28
SNORA40.15-201ENST00000516884 CFAP44Q96MT7 982 aa7.06□□□□□ -1.28
SNORA40.15-201ENST00000516884 IRX2Q9BZI1 471 aaPredicted RBP7.06□□□□□ -1.28
SNORA40.15-201ENST00000516884 WDR70Q9NW82 654 aa7.06□□□□□ -1.28
SNORA40.15-201ENST00000516884 NBPF26B4DH59 902 aa7.05□□□□□ -1.28
SNORA40.15-201ENST00000516884 SAMD7Q7Z3H4 446 aa7.05□□□□□ -1.28
SNORA40.15-201ENST00000516884 NPDC1Q9NQX5 325 aaPredicted RBP7.05□□□□□ -1.28
SNORA40.15-201ENST00000516884 SMAPO00193 183 aa7.04□□□□□ -1.28
SNORA40.15-201ENST00000516884 TJAP1Q5JTD0 557 aa7.04□□□□□ -1.28
SNORA40.15-201ENST00000516884 PPP4CP60510 307 aa7.02□□□□□ -1.29
SNORA40.15-201ENST00000516884 PNMA3Q9UL41 463 aa7.02□□□□□ -1.29
SNORA40.15-201ENST00000516884 NUDT18Q6ZVK8 323 aa7.01□□□□□ -1.29
SNORA40.15-201ENST00000516884 ARHGEF1Q92888 912 aaKnown RBP7.01□□□□□ -1.29
SNORA40.15-201ENST00000516884 PADI6Q6TGC4 694 aa6.99□□□□□ -1.29
SNORA40.15-201ENST00000516884 MTRQ99707 1265 aa6.99□□□□□ -1.29
SNORA40.15-201ENST00000516884 APLP1P51693 650 aa6.98□□□□□ -1.29
SNORA40.15-201ENST00000516884 EYA1Q99502 592 aa6.98□□□□□ -1.29
SNORA40.15-201ENST00000516884 IL21Q9HBE4 155 aa6.98□□□□□ -1.29
SNORA40.15-201ENST00000516884 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
SNORA40.15-201ENST00000516884 TSHZ2Q9NRE2 1034 aa6.97□□□□□ -1.29
SNORA40.15-201ENST00000516884 MLLT3P42568 568 aaPredicted RBP6.96□□□□□ -1.3
SNORA40.15-201ENST00000516884 NECTIN2Q92692 538 aa6.96□□□□□ -1.3
SNORA40.15-201ENST00000516884 PTGDRQ13258 359 aa6.95□□□□□ -1.3
SNORA40.15-201ENST00000516884 SWT1Q5T5J6 900 aaKnown RBP6.95□□□□□ -1.3
SNORA40.15-201ENST00000516884 SLF2Q8IX21 1173 aa6.94□□□□□ -1.3
SNORA40.15-201ENST00000516884 ZNF516Q92618 1163 aa6.94□□□□□ -1.3
SNORA40.15-201ENST00000516884 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
SNORA40.15-201ENST00000516884 LAPTM4AQ15012 233 aa6.93□□□□□ -1.3
SNORA40.15-201ENST00000516884 LCE2BO14633 110 aa6.92□□□□□ -1.3
SNORA40.15-201ENST00000516884 PPP1R18Q6NYC8 613 aa6.92□□□□□ -1.3
SNORA40.15-201ENST00000516884 V9GY48 417 aaPredicted RBP6.92□□□□□ -1.3
SNORA40.15-201ENST00000516884 ADGRG1Q9Y653 693 aa6.91□□□□□ -1.3
SNORA40.15-201ENST00000516884 PRKD2Q9BZL6 878 aa6.9□□□□□ -1.3
SNORA40.15-201ENST00000516884 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.3
SNORA40.15-201ENST00000516884 RNF40O75150 1001 aa6.89□□□□□ -1.31
SNORA40.15-201ENST00000516884 Q6ZNB5 142 aa6.89□□□□□ -1.31
SNORA40.15-201ENST00000516884 NKX2-3Q8TAU0 364 aa6.89□□□□□ -1.31
SNORA40.15-201ENST00000516884 TMEM134Q9H6X4 195 aa6.89□□□□□ -1.31
SNORA40.15-201ENST00000516884 DNAJB2P25686 324 aa6.88□□□□□ -1.31
SNORA40.15-201ENST00000516884 PRR14Q9BWN1 585 aa6.88□□□□□ -1.31
SNORA40.15-201ENST00000516884 ZPR1O75312 459 aa6.87□□□□□ -1.31
SNORA40.15-201ENST00000516884 P3H3Q8IVL6 736 aa6.87□□□□□ -1.31
SNORA40.15-201ENST00000516884 TMUB1Q9BVT8 246 aa6.87□□□□□ -1.31
SNORA40.15-201ENST00000516884 NRG2O14511 850 aaPredicted RBP6.86□□□□□ -1.31
SNORA40.15-201ENST00000516884 SLC4A3P48751 1232 aa6.86□□□□□ -1.31
SNORA40.15-201ENST00000516884 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
SNORA40.15-201ENST00000516884 GFRA3O60609 400 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms