RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 ADAM33Q9BZ11 813 aa14.21□□□□□ -0.13
SNORA48.9-201ENST00000516419 NPDC1Q9NQX5 325 aaPredicted RBP14.2□□□□□ -0.14
SNORA48.9-201ENST00000516419 ST18O60284 1047 aa14.19□□□□□ -0.14
SNORA48.9-201ENST00000516419 AK7Q96M32 723 aa14.18□□□□□ -0.14
SNORA48.9-201ENST00000516419 CERKQ8TCT0 537 aa14.17□□□□□ -0.14
SNORA48.9-201ENST00000516419 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
SNORA48.9-201ENST00000516419 MINK1Q8N4C8 1332 aaPredicted RBP14.16□□□□□ -0.14
SNORA48.9-201ENST00000516419 MAP2K5Q13163 448 aa14.15□□□□□ -0.14
SNORA48.9-201ENST00000516419 FECHP22830 423 aa14.13□□□□□ -0.15
SNORA48.9-201ENST00000516419 ERBB3P21860 1342 aa14.13□□□□□ -0.15
SNORA48.9-201ENST00000516419 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
SNORA48.9-201ENST00000516419 IRF6O14896 467 aa14.11□□□□□ -0.15
SNORA48.9-201ENST00000516419 PTPREP23469 700 aa14.11□□□□□ -0.15
SNORA48.9-201ENST00000516419 EMP3P54852 163 aa14.09□□□□□ -0.15
SNORA48.9-201ENST00000516419 VARS2Q5ST30 1063 aaKnown RBP14.08□□□□□ -0.16
SNORA48.9-201ENST00000516419 RBM27Q9P2N5 1060 aaKnown RBP14.08□□□□□ -0.16
SNORA48.9-201ENST00000516419 PPP1R3GB7ZBB8 358 aa14.07□□□□□ -0.16
SNORA48.9-201ENST00000516419 CCDC102AQ96A19 550 aa14.07□□□□□ -0.16
SNORA48.9-201ENST00000516419 MARVELD3Q96A59 401 aa14.07□□□□□ -0.16
SNORA48.9-201ENST00000516419 TRIM66O15016 1216 aa14.06□□□□□ -0.16
SNORA48.9-201ENST00000516419 COL9A1P20849 921 aa14.05□□□□□ -0.16
SNORA48.9-201ENST00000516419 PRSS12P56730 875 aa14.05□□□□□ -0.16
SNORA48.9-201ENST00000516419 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
SNORA48.9-201ENST00000516419 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
SNORA48.9-201ENST00000516419 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
SNORA48.9-201ENST00000516419 TTC13Q8NBP0 860 aa14.03□□□□□ -0.16
SNORA48.9-201ENST00000516419 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
SNORA48.9-201ENST00000516419 KCNK17Q96T54 332 aa14.02□□□□□ -0.17
SNORA48.9-201ENST00000516419 FAM205CA6NFA0 338 aa14.01□□□□□ -0.17
SNORA48.9-201ENST00000516419 NEUROD2Q15784 382 aa14.01□□□□□ -0.17
SNORA48.9-201ENST00000516419 PDE4DQ08499 809 aa13.99□□□□□ -0.17
SNORA48.9-201ENST00000516419 ARHGAP33O14559 1287 aa13.98□□□□□ -0.17
SNORA48.9-201ENST00000516419 LCE2DQ5TA82 110 aaPredicted RBP13.98□□□□□ -0.17
SNORA48.9-201ENST00000516419 ZNF687Q8N1G0 1237 aa13.98□□□□□ -0.17
SNORA48.9-201ENST00000516419 OATP04181 439 aa13.97□□□□□ -0.17
SNORA48.9-201ENST00000516419 PBX2P40425 430 aa13.97□□□□□ -0.17
SNORA48.9-201ENST00000516419 AMHR2Q16671 573 aa13.96□□□□□ -0.17
SNORA48.9-201ENST00000516419 ADGRG1Q9Y653 693 aa13.96□□□□□ -0.17
SNORA48.9-201ENST00000516419 HS3ST6Q96QI5 342 aa13.95□□□□□ -0.18
SNORA48.9-201ENST00000516419 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
SNORA48.9-201ENST00000516419 ONECUT3O60422 494 aaPredicted RBP13.94□□□□□ -0.18
SNORA48.9-201ENST00000516419 PSEN2P49810 448 aa13.94□□□□□ -0.18
SNORA48.9-201ENST00000516419 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
SNORA48.9-201ENST00000516419 TSKSQ9UJT2 592 aa13.94□□□□□ -0.18
SNORA48.9-201ENST00000516419 FAM198AQ9UFP1 575 aa13.93□□□□□ -0.18
SNORA48.9-201ENST00000516419 ZBED2Q9BTP6 218 aa13.92□□□□□ -0.18
SNORA48.9-201ENST00000516419 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
SNORA48.9-201ENST00000516419 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
SNORA48.9-201ENST00000516419 PACS2Q86VP3 889 aa13.91□□□□□ -0.18
SNORA48.9-201ENST00000516419 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
SNORA48.9-201ENST00000516419 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
SNORA48.9-201ENST00000516419 RBM46Q8TBY0 533 aaKnown RBP13.9□□□□□ -0.18
SNORA48.9-201ENST00000516419 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
SNORA48.9-201ENST00000516419 AXIN2Q9Y2T1 843 aa13.9□□□□□ -0.18
SNORA48.9-201ENST00000516419 PROX2Q3B8N5 592 aa13.89□□□□□ -0.19
SNORA48.9-201ENST00000516419 SLC4A5Q9BY07 1137 aa13.89□□□□□ -0.19
SNORA48.9-201ENST00000516419 GPBP1L1Q9HC44 474 aaPredicted RBP13.89□□□□□ -0.19
SNORA48.9-201ENST00000516419 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
SNORA48.9-201ENST00000516419 KDM4CQ9H3R0 1056 aa13.88□□□□□ -0.19
SNORA48.9-201ENST00000516419 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
SNORA48.9-201ENST00000516419 PARP9Q8IXQ6 854 aa13.87□□□□□ -0.19
SNORA48.9-201ENST00000516419 PHOX2BQ99453 314 aa13.87□□□□□ -0.19
SNORA48.9-201ENST00000516419 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
SNORA48.9-201ENST00000516419 TATDN2Q93075 761 aa13.86□□□□□ -0.19
SNORA48.9-201ENST00000516419 NUDT18Q6ZVK8 323 aa13.85□□□□□ -0.19
SNORA48.9-201ENST00000516419 EYA1Q99502 592 aa13.85□□□□□ -0.19
SNORA48.9-201ENST00000516419 PNMA3Q9UL41 463 aa13.85□□□□□ -0.19
SNORA48.9-201ENST00000516419 CLCN1P35523 988 aa13.84□□□□□ -0.19
SNORA48.9-201ENST00000516419 TMEM132AQ24JP5 1023 aa13.84□□□□□ -0.19
SNORA48.9-201ENST00000516419 KIAA1468Q9P260 1216 aa13.84□□□□□ -0.19
SNORA48.9-201ENST00000516419 RABGEF1Q9UJ41 708 aa13.83□□□□□ -0.2
SNORA48.9-201ENST00000516419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
SNORA48.9-201ENST00000516419 C3orf80F5H4A9 247 aa13.82□□□□□ -0.2
SNORA48.9-201ENST00000516419 MDM2Q00987 491 aaPredicted RBP13.82□□□□□ -0.2
SNORA48.9-201ENST00000516419 TMUB1Q9BVT8 246 aa13.82□□□□□ -0.2
SNORA48.9-201ENST00000516419 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
SNORA48.9-201ENST00000516419 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
SNORA48.9-201ENST00000516419 VPS9D1Q9Y2B5 631 aa13.81□□□□□ -0.2
SNORA48.9-201ENST00000516419 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
SNORA48.9-201ENST00000516419 REPIN1Q9BWE0 567 aaKnown RBP13.8□□□□□ -0.2
SNORA48.9-201ENST00000516419 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
SNORA48.9-201ENST00000516419 TK2O00142 265 aa13.79□□□□□ -0.2
SNORA48.9-201ENST00000516419 SMAPO00193 183 aa13.78□□□□□ -0.2
SNORA48.9-201ENST00000516419 DNAJB2P25686 324 aa13.77□□□□□ -0.21
SNORA48.9-201ENST00000516419 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNORA48.9-201ENST00000516419 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
SNORA48.9-201ENST00000516419 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
SNORA48.9-201ENST00000516419 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
SNORA48.9-201ENST00000516419 FAM117AQ9C073 453 aa13.73□□□□□ -0.21
SNORA48.9-201ENST00000516419 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
SNORA48.9-201ENST00000516419 MS4A1P11836 297 aa13.72□□□□□ -0.21
SNORA48.9-201ENST00000516419 SSTR3P32745 418 aaPredicted RBP13.72□□□□□ -0.21
SNORA48.9-201ENST00000516419 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
SNORA48.9-201ENST00000516419 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
SNORA48.9-201ENST00000516419 BHMG1C9JSJ3 638 aaPredicted RBP13.71□□□□□ -0.21
SNORA48.9-201ENST00000516419 ADGRD1Q6QNK2 874 aa13.71□□□□□ -0.21
SNORA48.9-201ENST00000516419 LAPTM4BQ86VI4 370 aa13.71□□□□□ -0.21
SNORA48.9-201ENST00000516419 SEPT9Q9UHD8 586 aaPredicted RBP13.71□□□□□ -0.21
SNORA48.9-201ENST00000516419 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
SNORA48.9-201ENST00000516419 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms