RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 FBXW7Q969H0 707 aa8.41□□□□□ -1.06
SNORA40.12-201ENST00000516329 EPAS1Q99814 870 aa8.41□□□□□ -1.06
SNORA40.12-201ENST00000516329 MLLT3P42568 568 aaPredicted RBP8.39□□□□□ -1.07
SNORA40.12-201ENST00000516329 MAP3K7O43318 606 aa8.38□□□□□ -1.07
SNORA40.12-201ENST00000516329 PRIM1P49642 420 aaKnown RBP8.38□□□□□ -1.07
SNORA40.12-201ENST00000516329 SEMA3EO15041 775 aa8.37□□□□□ -1.07
SNORA40.12-201ENST00000516329 EN1Q05925 392 aaPredicted RBP8.37□□□□□ -1.07
SNORA40.12-201ENST00000516329 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
SNORA40.12-201ENST00000516329 ADGRD1Q6QNK2 874 aa8.37□□□□□ -1.07
SNORA40.12-201ENST00000516329 COL9A1P20849 921 aa8.36□□□□□ -1.07
SNORA40.12-201ENST00000516329 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
SNORA40.12-201ENST00000516329 OSBPP22059 807 aa8.35□□□□□ -1.07
SNORA40.12-201ENST00000516329 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
SNORA40.12-201ENST00000516329 MMRN1Q13201 1228 aa8.34□□□□□ -1.07
SNORA40.12-201ENST00000516329 PROX2Q3B8N5 592 aa8.33□□□□□ -1.08
SNORA40.12-201ENST00000516329 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
SNORA40.12-201ENST00000516329 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
SNORA40.12-201ENST00000516329 TK2O00142 265 aa8.32□□□□□ -1.08
SNORA40.12-201ENST00000516329 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
SNORA40.12-201ENST00000516329 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
SNORA40.12-201ENST00000516329 TESPA1A2RU30 521 aaPredicted RBP8.29□□□□□ -1.08
SNORA40.12-201ENST00000516329 SLC4A5Q9BY07 1137 aa8.29□□□□□ -1.08
SNORA40.12-201ENST00000516329 HRO43593 1189 aa8.28□□□□□ -1.08
SNORA40.12-201ENST00000516329 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
SNORA40.12-201ENST00000516329 STAC3Q96MF2 364 aa8.28□□□□□ -1.08
SNORA40.12-201ENST00000516329 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
SNORA40.12-201ENST00000516329 TRIM6-TRIM34B2RNG4 842 aa8.25□□□□□ -1.09
SNORA40.12-201ENST00000516329 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
SNORA40.12-201ENST00000516329 RBM26Q5T8P6 1007 aaKnown RBP8.25□□□□□ -1.09
SNORA40.12-201ENST00000516329 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
SNORA40.12-201ENST00000516329 MRPL50Q8N5N7 158 aaKnown RBP8.24□□□□□ -1.09
SNORA40.12-201ENST00000516329 CDCA7LQ96GN5 454 aa8.24□□□□□ -1.09
SNORA40.12-201ENST00000516329 PRSS12P56730 875 aa8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 SMYD5Q6GMV2 418 aa8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 CERKQ8TCT0 537 aa8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 NBPF3Q9H094 633 aa8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 SEPT9Q9UHD8 586 aaPredicted RBP8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
SNORA40.12-201ENST00000516329 BHMG1C9JSJ3 638 aaPredicted RBP8.22□□□□□ -1.09
SNORA40.12-201ENST00000516329 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
SNORA40.12-201ENST00000516329 NPDC1Q9NQX5 325 aaPredicted RBP8.22□□□□□ -1.09
SNORA40.12-201ENST00000516329 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
SNORA40.12-201ENST00000516329 PADI6Q6TGC4 694 aa8.21□□□□□ -1.1
SNORA40.12-201ENST00000516329 FAM198AQ9UFP1 575 aa8.21□□□□□ -1.1
SNORA40.12-201ENST00000516329 SMAPO00193 183 aa8.19□□□□□ -1.1
SNORA40.12-201ENST00000516329 PTGDRQ13258 359 aa8.19□□□□□ -1.1
SNORA40.12-201ENST00000516329 PACS2Q86VP3 889 aa8.19□□□□□ -1.1
SNORA40.12-201ENST00000516329 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
SNORA40.12-201ENST00000516329 ONECUT3O60422 494 aaPredicted RBP8.18□□□□□ -1.1
SNORA40.12-201ENST00000516329 PNMA3Q9UL41 463 aa8.18□□□□□ -1.1
SNORA40.12-201ENST00000516329 NBPF26B4DH59 902 aa8.17□□□□□ -1.1
SNORA40.12-201ENST00000516329 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
SNORA40.12-201ENST00000516329 FCHSD2O94868 740 aa8.17□□□□□ -1.1
SNORA40.12-201ENST00000516329 WNT2BQ93097 391 aa8.17□□□□□ -1.1
SNORA40.12-201ENST00000516329 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
SNORA40.12-201ENST00000516329 NUDT18Q6ZVK8 323 aa8.16□□□□□ -1.1
SNORA40.12-201ENST00000516329 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
SNORA40.12-201ENST00000516329 FAM98CQ17RN3 349 aaKnown RBP8.15□□□□□ -1.1
SNORA40.12-201ENST00000516329 LAPTM4BQ86VI4 370 aa8.15□□□□□ -1.1
SNORA40.12-201ENST00000516329 ANKK1Q8NFD2 765 aa8.15□□□□□ -1.1
SNORA40.12-201ENST00000516329 TATDN2Q93075 761 aa8.15□□□□□ -1.1
SNORA40.12-201ENST00000516329 PTPN5P54829 565 aa8.14□□□□□ -1.11
SNORA40.12-201ENST00000516329 TTC13Q8NBP0 860 aa8.14□□□□□ -1.11
SNORA40.12-201ENST00000516329 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
SNORA40.12-201ENST00000516329 GPR37O15354 613 aa8.13□□□□□ -1.11
SNORA40.12-201ENST00000516329 BCAMP50895 628 aa8.13□□□□□ -1.11
SNORA40.12-201ENST00000516329 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
SNORA40.12-201ENST00000516329 THSD4Q6ZMP0 1018 aa8.13□□□□□ -1.11
SNORA40.12-201ENST00000516329 HIC1Q14526 733 aa8.12□□□□□ -1.11
SNORA40.12-201ENST00000516329 FECHP22830 423 aa8.11□□□□□ -1.11
SNORA40.12-201ENST00000516329 HCSTQ9UBK5 93 aa8.11□□□□□ -1.11
SNORA40.12-201ENST00000516329 GNPATO15228 680 aa8.1□□□□□ -1.11
SNORA40.12-201ENST00000516329 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
SNORA40.12-201ENST00000516329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNORA40.12-201ENST00000516329 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
SNORA40.12-201ENST00000516329 LRCH3Q96II8 777 aa8.09□□□□□ -1.11
SNORA40.12-201ENST00000516329 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
SNORA40.12-201ENST00000516329 ADGRG1Q9Y653 693 aa8.09□□□□□ -1.11
SNORA40.12-201ENST00000516329 SOWAHBA6NEL2 793 aa8.08□□□□□ -1.12
SNORA40.12-201ENST00000516329 RNF40O75150 1001 aa8.08□□□□□ -1.12
SNORA40.12-201ENST00000516329 RBM46Q8TBY0 533 aaKnown RBP8.07□□□□□ -1.12
SNORA40.12-201ENST00000516329 EYA1Q99502 592 aa8.07□□□□□ -1.12
SNORA40.12-201ENST00000516329 HPS5Q9UPZ3 1129 aa8.06□□□□□ -1.12
SNORA40.12-201ENST00000516329 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
SNORA40.12-201ENST00000516329 WBP1LQ9NX94 342 aa8.04□□□□□ -1.12
SNORA40.12-201ENST00000516329 RCCD1A6NED2 376 aa8.03□□□□□ -1.12
SNORA40.12-201ENST00000516329 DNAJB2P25686 324 aa8.03□□□□□ -1.12
SNORA40.12-201ENST00000516329 HDGFP51858 240 aaKnown RBP8.03□□□□□ -1.12
SNORA40.12-201ENST00000516329 TSR3Q9UJK0 312 aaKnown RBP8.03□□□□□ -1.12
SNORA40.12-201ENST00000516329 METTL3Q86U44 580 aaKnown RBP8.02□□□□□ -1.13
SNORA40.12-201ENST00000516329 PXYLP1Q8TE99 480 aa8.02□□□□□ -1.13
SNORA40.12-201ENST00000516329 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
SNORA40.12-201ENST00000516329 OATP04181 439 aa8.01□□□□□ -1.13
SNORA40.12-201ENST00000516329 PPP4CP60510 307 aa8.01□□□□□ -1.13
SNORA40.12-201ENST00000516329 BCANQ96GW7 911 aa8.01□□□□□ -1.13
SNORA40.12-201ENST00000516329 TMEM134Q9H6X4 195 aa8.01□□□□□ -1.13
SNORA40.12-201ENST00000516329 MAP2K5Q13163 448 aa8□□□□□ -1.13
SNORA40.12-201ENST00000516329 SLF2Q8IX21 1173 aa8□□□□□ -1.13
SNORA40.12-201ENST00000516329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms