RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 C3orf67Q6ZVT6 689 aa6.8□□□□□ -1.32
RNU6-27P-201ENST00000516146 TRAK2O60296 914 aa6.79□□□□□ -1.32
RNU6-27P-201ENST00000516146 SLC34A2O95436 690 aa6.79□□□□□ -1.32
RNU6-27P-201ENST00000516146 MDM2Q00987 491 aaPredicted RBP6.79□□□□□ -1.32
RNU6-27P-201ENST00000516146 REPIN1Q9BWE0 567 aaKnown RBP6.79□□□□□ -1.32
RNU6-27P-201ENST00000516146 CDHR5Q9HBB8 845 aa6.79□□□□□ -1.32
RNU6-27P-201ENST00000516146 SSTR3P32745 418 aaPredicted RBP6.78□□□□□ -1.32
RNU6-27P-201ENST00000516146 MCM6Q14566 821 aa6.78□□□□□ -1.32
RNU6-27P-201ENST00000516146 CLUAP1Q96AJ1 413 aa6.78□□□□□ -1.32
RNU6-27P-201ENST00000516146 TMUB1Q9BVT8 246 aa6.78□□□□□ -1.32
RNU6-27P-201ENST00000516146 RAD21O60216 631 aa6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 OATP04181 439 aa6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 RANGAP1P46060 587 aaPredicted RBP6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 TYW1BQ6NUM6 668 aa6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 SLAIN1Q8ND83 568 aa6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 CERKQ8TCT0 537 aa6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 FBXW7Q969H0 707 aa6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 RBM33Q96EV2 1170 aaKnown RBP6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 NPDC1Q9NQX5 325 aaPredicted RBP6.77□□□□□ -1.33
RNU6-27P-201ENST00000516146 TRIM26Q12899 539 aaPredicted RBP6.76□□□□□ -1.33
RNU6-27P-201ENST00000516146 SLC39A7Q92504 469 aa6.76□□□□□ -1.33
RNU6-27P-201ENST00000516146 BEGAINQ9BUH8 593 aa6.76□□□□□ -1.33
RNU6-27P-201ENST00000516146 PDIA4P13667 645 aaKnown RBP6.75□□□□□ -1.33
RNU6-27P-201ENST00000516146 PROSER2Q86WR7 435 aaPredicted RBP6.75□□□□□ -1.33
RNU6-27P-201ENST00000516146 CCDC82Q8N4S0 544 aa6.75□□□□□ -1.33
RNU6-27P-201ENST00000516146 FAM217BQ9NTX9 383 aaPredicted RBP6.75□□□□□ -1.33
RNU6-27P-201ENST00000516146 PCDHGA10Q9Y5H3 936 aa6.75□□□□□ -1.33
RNU6-27P-201ENST00000516146 DIXDC1Q155Q3 683 aa6.74□□□□□ -1.33
RNU6-27P-201ENST00000516146 DCBLD2Q96PD2 775 aa6.74□□□□□ -1.33
RNU6-27P-201ENST00000516146 COLQQ9Y215 455 aaPredicted RBP6.74□□□□□ -1.33
RNU6-27P-201ENST00000516146 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
RNU6-27P-201ENST00000516146 METTL3Q86U44 580 aaKnown RBP6.73□□□□□ -1.33
RNU6-27P-201ENST00000516146 JPH4Q96JJ6 628 aa6.73□□□□□ -1.33
RNU6-27P-201ENST00000516146 ZBTB7CA1YPR0 619 aa6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 SPDYE5A6NIY4 337 aa6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 C7P10643 843 aa6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 EVX2Q03828 476 aa6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 PHOX2BQ99453 314 aa6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 RBM27Q9P2N5 1060 aaKnown RBP6.72□□□□□ -1.33
RNU6-27P-201ENST00000516146 CLK2P49760 499 aaKnown RBP6.71□□□□□ -1.34
RNU6-27P-201ENST00000516146 POLR3EQ9NVU0 708 aa6.71□□□□□ -1.34
RNU6-27P-201ENST00000516146 SERPINA10Q9UK55 444 aa6.71□□□□□ -1.34
RNU6-27P-201ENST00000516146 PCDHGA4Q9Y5G9 962 aa6.71□□□□□ -1.34
RNU6-27P-201ENST00000516146 MYSM1Q5VVJ2 828 aa6.7□□□□□ -1.34
RNU6-27P-201ENST00000516146 PADI6Q6TGC4 694 aa6.7□□□□□ -1.34
RNU6-27P-201ENST00000516146 PROCA1Q8NCQ7 364 aaPredicted RBP6.7□□□□□ -1.34
RNU6-27P-201ENST00000516146 PXYLP1Q8TE99 480 aa6.7□□□□□ -1.34
RNU6-27P-201ENST00000516146 BANK1Q8NDB2 785 aa6.69□□□□□ -1.34
RNU6-27P-201ENST00000516146 RBM46Q8TBY0 533 aaKnown RBP6.69□□□□□ -1.34
RNU6-27P-201ENST00000516146 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
RNU6-27P-201ENST00000516146 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.69□□□□□ -1.34
RNU6-27P-201ENST00000516146 ZNF777Q9ULD5 760 aaPredicted RBP6.69□□□□□ -1.34
RNU6-27P-201ENST00000516146 ADGRG1Q9Y653 693 aa6.69□□□□□ -1.34
RNU6-27P-201ENST00000516146 GABBR2O75899 941 aa6.68□□□□□ -1.34
RNU6-27P-201ENST00000516146 HRCP23327 699 aa6.68□□□□□ -1.34
RNU6-27P-201ENST00000516146 C6orf132Q5T0Z8 1188 aa6.68□□□□□ -1.34
RNU6-27P-201ENST00000516146 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
RNU6-27P-201ENST00000516146 PELP1Q8IZL8 1130 aaKnown RBP6.68□□□□□ -1.34
RNU6-27P-201ENST00000516146 FOSBP53539 338 aa6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 FAM161AQ3B820 660 aa6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 TMEM259Q4ZIN3 620 aa6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 FNBP4Q8N3X1 1017 aaPredicted RBP6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 ZDHHC16Q969W1 377 aa6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 TBC1D2Q9BYX2 928 aa6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 METRNQ9UJH8 293 aa6.67□□□□□ -1.34
RNU6-27P-201ENST00000516146 RFC5P40937 340 aa6.66□□□□□ -1.34
RNU6-27P-201ENST00000516146 NLRP7Q8WX94 980 aa6.66□□□□□ -1.34
RNU6-27P-201ENST00000516146 POM121Q96HA1 1249 aa6.66□□□□□ -1.34
RNU6-27P-201ENST00000516146 PRM3Q9NNZ6 103 aa6.66□□□□□ -1.34
RNU6-27P-201ENST00000516146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.65□□□□□ -1.34
RNU6-27P-201ENST00000516146 POTEFA5A3E0 1075 aa6.65□□□□□ -1.34
RNU6-27P-201ENST00000516146 ZNF454Q8N9F8 522 aa6.65□□□□□ -1.34
RNU6-27P-201ENST00000516146 TTC13Q8NBP0 860 aa6.65□□□□□ -1.34
RNU6-27P-201ENST00000516146 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
RNU6-27P-201ENST00000516146 CCDC9Q9Y3X0 531 aaKnown RBP6.65□□□□□ -1.34
RNU6-27P-201ENST00000516146 PRSS12P56730 875 aa6.64□□□□□ -1.35
RNU6-27P-201ENST00000516146 SULF1Q8IWU6 871 aa6.64□□□□□ -1.35
RNU6-27P-201ENST00000516146 ZNF330Q9Y3S2 320 aaPredicted RBP6.64□□□□□ -1.35
RNU6-27P-201ENST00000516146 KDM4FA0A1W2PPD8 638 aa6.63□□□□□ -1.35
RNU6-27P-201ENST00000516146 TUSC1Q2TAM9 212 aa6.63□□□□□ -1.35
RNU6-27P-201ENST00000516146 PPP2R2DQ66LE6 453 aa6.63□□□□□ -1.35
RNU6-27P-201ENST00000516146 RIC3Q7Z5B4 369 aa6.63□□□□□ -1.35
RNU6-27P-201ENST00000516146 NUTM1Q86Y26 1132 aa6.62□□□□□ -1.35
RNU6-27P-201ENST00000516146 CDCA7LQ96GN5 454 aa6.62□□□□□ -1.35
RNU6-27P-201ENST00000516146 PLSCR2Q9NRY7 297 aa6.62□□□□□ -1.35
RNU6-27P-201ENST00000516146 SOCS7O14512 581 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 RIMBP2O15034 1052 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 DOK7Q18PE1 504 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 SPIRE2Q8WWL2 714 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 TRAIPQ9BWF2 469 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 ADAM33Q9BZ11 813 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 LIMD1Q9UGP4 676 aa6.61□□□□□ -1.35
RNU6-27P-201ENST00000516146 RCCD1A6NED2 376 aa6.6□□□□□ -1.35
RNU6-27P-201ENST00000516146 CD46P15529 392 aa6.6□□□□□ -1.35
RNU6-27P-201ENST00000516146 SPTLC1O15269 473 aa6.59□□□□□ -1.35
RNU6-27P-201ENST00000516146 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms