RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 MLLT3P42568 568 aaPredicted RBP8.06□□□□□ -1.12
RNU4-29P-201ENST00000515943 PRIM1P49642 420 aaKnown RBP8.06□□□□□ -1.12
RNU4-29P-201ENST00000515943 EN1Q05925 392 aaPredicted RBP8.06□□□□□ -1.12
RNU4-29P-201ENST00000515943 KCNH8Q96L42 1107 aa8.06□□□□□ -1.12
RNU4-29P-201ENST00000515943 OSBPP22059 807 aa8.05□□□□□ -1.12
RNU4-29P-201ENST00000515943 SEMA3EO15041 775 aa8.04□□□□□ -1.12
RNU4-29P-201ENST00000515943 RBM33Q96EV2 1170 aaKnown RBP8.04□□□□□ -1.12
RNU4-29P-201ENST00000515943 PPP1R3GB7ZBB8 358 aa8.03□□□□□ -1.12
RNU4-29P-201ENST00000515943 C6orf132Q5T0Z8 1188 aa8.03□□□□□ -1.12
RNU4-29P-201ENST00000515943 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
RNU4-29P-201ENST00000515943 TK2O00142 265 aa8.02□□□□□ -1.13
RNU4-29P-201ENST00000515943 MAP3K7O43318 606 aa8.02□□□□□ -1.13
RNU4-29P-201ENST00000515943 TSR1Q2NL82 804 aaKnown RBP8.02□□□□□ -1.13
RNU4-29P-201ENST00000515943 ADGRD1Q6QNK2 874 aa8.02□□□□□ -1.13
RNU4-29P-201ENST00000515943 TESPA1A2RU30 521 aaPredicted RBP8.01□□□□□ -1.13
RNU4-29P-201ENST00000515943 SLC24A1O60721 1099 aa8.01□□□□□ -1.13
RNU4-29P-201ENST00000515943 COL9A1P20849 921 aa8.01□□□□□ -1.13
RNU4-29P-201ENST00000515943 ZBED2Q9BTP6 218 aa8.01□□□□□ -1.13
RNU4-29P-201ENST00000515943 SLC4A5Q9BY07 1137 aa8.01□□□□□ -1.13
RNU4-29P-201ENST00000515943 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
RNU4-29P-201ENST00000515943 VPS9D1Q9Y2B5 631 aa7.99□□□□□ -1.13
RNU4-29P-201ENST00000515943 HRO43593 1189 aa7.98□□□□□ -1.13
RNU4-29P-201ENST00000515943 PROX2Q3B8N5 592 aa7.96□□□□□ -1.14
RNU4-29P-201ENST00000515943 CERKQ8TCT0 537 aa7.95□□□□□ -1.14
RNU4-29P-201ENST00000515943 SMYD5Q6GMV2 418 aa7.94□□□□□ -1.14
RNU4-29P-201ENST00000515943 TRIM6-TRIM34B2RNG4 842 aa7.93□□□□□ -1.14
RNU4-29P-201ENST00000515943 BHMG1C9JSJ3 638 aaPredicted RBP7.93□□□□□ -1.14
RNU4-29P-201ENST00000515943 NPDC1Q9NQX5 325 aaPredicted RBP7.93□□□□□ -1.14
RNU4-29P-201ENST00000515943 RABGEF1Q9UJ41 708 aa7.93□□□□□ -1.14
RNU4-29P-201ENST00000515943 MYT1LQ9UL68 1186 aa7.93□□□□□ -1.14
RNU4-29P-201ENST00000515943 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
RNU4-29P-201ENST00000515943 PRSS12P56730 875 aa7.91□□□□□ -1.14
RNU4-29P-201ENST00000515943 RBM26Q5T8P6 1007 aaKnown RBP7.91□□□□□ -1.14
RNU4-29P-201ENST00000515943 RNF166Q96A37 237 aaPredicted RBP7.91□□□□□ -1.14
RNU4-29P-201ENST00000515943 CDCA7LQ96GN5 454 aa7.91□□□□□ -1.14
RNU4-29P-201ENST00000515943 RBM27Q9P2N5 1060 aaKnown RBP7.91□□□□□ -1.14
RNU4-29P-201ENST00000515943 NUTM2FA1L443 756 aa7.9□□□□□ -1.14
RNU4-29P-201ENST00000515943 PTGDRQ13258 359 aa7.9□□□□□ -1.14
RNU4-29P-201ENST00000515943 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
RNU4-29P-201ENST00000515943 KIAA1468Q9P260 1216 aa7.9□□□□□ -1.14
RNU4-29P-201ENST00000515943 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
RNU4-29P-201ENST00000515943 TSKSQ9UJT2 592 aa7.9□□□□□ -1.14
RNU4-29P-201ENST00000515943 TTC13Q8NBP0 860 aa7.89□□□□□ -1.15
RNU4-29P-201ENST00000515943 GPR37O15354 613 aa7.88□□□□□ -1.15
RNU4-29P-201ENST00000515943 PADI6Q6TGC4 694 aa7.88□□□□□ -1.15
RNU4-29P-201ENST00000515943 FCHSD2O94868 740 aa7.87□□□□□ -1.15
RNU4-29P-201ENST00000515943 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
RNU4-29P-201ENST00000515943 STAC3Q96MF2 364 aa7.87□□□□□ -1.15
RNU4-29P-201ENST00000515943 TULP1O00294 542 aaPredicted RBP7.86□□□□□ -1.15
RNU4-29P-201ENST00000515943 LAPTM4BQ86VI4 370 aa7.86□□□□□ -1.15
RNU4-29P-201ENST00000515943 PACS2Q86VP3 889 aa7.86□□□□□ -1.15
RNU4-29P-201ENST00000515943 SEPT9Q9UHD8 586 aaPredicted RBP7.86□□□□□ -1.15
RNU4-29P-201ENST00000515943 NBPF26B4DH59 902 aa7.85□□□□□ -1.15
RNU4-29P-201ENST00000515943 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
RNU4-29P-201ENST00000515943 GPIHBP1Q8IV16 184 aa7.84□□□□□ -1.15
RNU4-29P-201ENST00000515943 HIC1Q14526 733 aa7.83□□□□□ -1.16
RNU4-29P-201ENST00000515943 FAM98CQ17RN3 349 aaKnown RBP7.83□□□□□ -1.16
RNU4-29P-201ENST00000515943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNU4-29P-201ENST00000515943 KCTD12Q96CX2 325 aaKnown RBP7.83□□□□□ -1.16
RNU4-29P-201ENST00000515943 SMAPO00193 183 aa7.82□□□□□ -1.16
RNU4-29P-201ENST00000515943 TATDN2Q93075 761 aa7.82□□□□□ -1.16
RNU4-29P-201ENST00000515943 PNMA3Q9UL41 463 aa7.82□□□□□ -1.16
RNU4-29P-201ENST00000515943 GOLGA8CPA6NN73 597 aa7.81□□□□□ -1.16
RNU4-29P-201ENST00000515943 GNPATO15228 680 aa7.81□□□□□ -1.16
RNU4-29P-201ENST00000515943 LMOD2Q6P5Q4 547 aa7.81□□□□□ -1.16
RNU4-29P-201ENST00000515943 NUDT18Q6ZVK8 323 aa7.81□□□□□ -1.16
RNU4-29P-201ENST00000515943 WNT2BQ93097 391 aa7.81□□□□□ -1.16
RNU4-29P-201ENST00000515943 ZFRQ96KR1 1074 aaKnown RBP7.81□□□□□ -1.16
RNU4-29P-201ENST00000515943 THSD4Q6ZMP0 1018 aa7.8□□□□□ -1.16
RNU4-29P-201ENST00000515943 ANKK1Q8NFD2 765 aa7.8□□□□□ -1.16
RNU4-29P-201ENST00000515943 ADGRG1Q9Y653 693 aa7.8□□□□□ -1.16
RNU4-29P-201ENST00000515943 FECHP22830 423 aa7.78□□□□□ -1.16
RNU4-29P-201ENST00000515943 EYA1Q99502 592 aa7.78□□□□□ -1.16
RNU4-29P-201ENST00000515943 SOWAHBA6NEL2 793 aa7.76□□□□□ -1.17
RNU4-29P-201ENST00000515943 BCAMP50895 628 aa7.76□□□□□ -1.17
RNU4-29P-201ENST00000515943 FAM161AQ3B820 660 aa7.76□□□□□ -1.17
RNU4-29P-201ENST00000515943 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
RNU4-29P-201ENST00000515943 RBM46Q8TBY0 533 aaKnown RBP7.75□□□□□ -1.17
RNU4-29P-201ENST00000515943 BCANQ96GW7 911 aa7.75□□□□□ -1.17
RNU4-29P-201ENST00000515943 LRCH3Q96II8 777 aa7.75□□□□□ -1.17
RNU4-29P-201ENST00000515943 SAMD7Q7Z3H4 446 aa7.74□□□□□ -1.17
RNU4-29P-201ENST00000515943 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
RNU4-29P-201ENST00000515943 DNAJB2P25686 324 aa7.73□□□□□ -1.17
RNU4-29P-201ENST00000515943 PTPN5P54829 565 aa7.73□□□□□ -1.17
RNU4-29P-201ENST00000515943 MAP2K5Q13163 448 aa7.73□□□□□ -1.17
RNU4-29P-201ENST00000515943 PXYLP1Q8TE99 480 aa7.73□□□□□ -1.17
RNU4-29P-201ENST00000515943 OATP04181 439 aa7.72□□□□□ -1.17
RNU4-29P-201ENST00000515943 METTL3Q86U44 580 aaKnown RBP7.72□□□□□ -1.17
RNU4-29P-201ENST00000515943 RCCD1A6NED2 376 aa7.71□□□□□ -1.18
RNU4-29P-201ENST00000515943 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
RNU4-29P-201ENST00000515943 ZC3H15Q8WU90 426 aaKnown RBP7.71□□□□□ -1.18
RNU4-29P-201ENST00000515943 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
RNU4-29P-201ENST00000515943 HPS5Q9UPZ3 1129 aa7.71□□□□□ -1.18
RNU4-29P-201ENST00000515943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.7□□□□□ -1.18
RNU4-29P-201ENST00000515943 TSR3Q9UJK0 312 aaKnown RBP7.7□□□□□ -1.18
RNU4-29P-201ENST00000515943 WBP1LQ9NX94 342 aa7.69□□□□□ -1.18
RNU4-29P-201ENST00000515943 ZMYND10O75800 440 aa7.68□□□□□ -1.18
RNU4-29P-201ENST00000515943 HDGFP51858 240 aaKnown RBP7.68□□□□□ -1.18
RNU4-29P-201ENST00000515943 SLF2Q8IX21 1173 aa7.68□□□□□ -1.18
RNU4-29P-201ENST00000515943 MINK1Q8N4C8 1332 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms