RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 PTPREP23469 700 aa10.96□□□□□ -0.65
PAPD4-216ENST00000515298 PSEN2P49810 448 aa10.96□□□□□ -0.65
PAPD4-216ENST00000515298 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
PAPD4-216ENST00000515298 C6orf132Q5T0Z8 1188 aa10.95□□□□□ -0.66
PAPD4-216ENST00000515298 MAP3K7O43318 606 aa10.94□□□□□ -0.66
PAPD4-216ENST00000515298 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
PAPD4-216ENST00000515298 TSR1Q2NL82 804 aaKnown RBP10.93□□□□□ -0.66
PAPD4-216ENST00000515298 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
PAPD4-216ENST00000515298 DMRTA1Q5VZB9 504 aa10.92□□□□□ -0.66
PAPD4-216ENST00000515298 KCNH8Q96L42 1107 aa10.92□□□□□ -0.66
PAPD4-216ENST00000515298 COL9A1P20849 921 aa10.91□□□□□ -0.66
PAPD4-216ENST00000515298 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
PAPD4-216ENST00000515298 RBM26Q5T8P6 1007 aaKnown RBP10.89□□□□□ -0.67
PAPD4-216ENST00000515298 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
PAPD4-216ENST00000515298 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
PAPD4-216ENST00000515298 ZBED2Q9BTP6 218 aa10.86□□□□□ -0.67
PAPD4-216ENST00000515298 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
PAPD4-216ENST00000515298 TK2O00142 265 aa10.85□□□□□ -0.67
PAPD4-216ENST00000515298 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
PAPD4-216ENST00000515298 BCANQ96GW7 911 aa10.85□□□□□ -0.67
PAPD4-216ENST00000515298 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
PAPD4-216ENST00000515298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
PAPD4-216ENST00000515298 CERKQ8TCT0 537 aa10.84□□□□□ -0.67
PAPD4-216ENST00000515298 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
PAPD4-216ENST00000515298 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
PAPD4-216ENST00000515298 VPS9D1Q9Y2B5 631 aa10.83□□□□□ -0.68
PAPD4-216ENST00000515298 PTGDRQ13258 359 aa10.81□□□□□ -0.68
PAPD4-216ENST00000515298 PROX2Q3B8N5 592 aa10.81□□□□□ -0.68
PAPD4-216ENST00000515298 HRO43593 1189 aa10.79□□□□□ -0.68
PAPD4-216ENST00000515298 PRSS12P56730 875 aa10.79□□□□□ -0.68
PAPD4-216ENST00000515298 TRIM6-TRIM34B2RNG4 842 aa10.78□□□□□ -0.68
PAPD4-216ENST00000515298 GPR37O15354 613 aa10.78□□□□□ -0.68
PAPD4-216ENST00000515298 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
PAPD4-216ENST00000515298 FCHSD2O94868 740 aa10.78□□□□□ -0.68
PAPD4-216ENST00000515298 LMOD2Q6P5Q4 547 aa10.78□□□□□ -0.68
PAPD4-216ENST00000515298 SPNS2Q8IVW8 549 aa10.78□□□□□ -0.68
PAPD4-216ENST00000515298 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
PAPD4-216ENST00000515298 GPIHBP1Q8IV16 184 aa10.77□□□□□ -0.69
PAPD4-216ENST00000515298 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
PAPD4-216ENST00000515298 TSKSQ9UJT2 592 aa10.77□□□□□ -0.69
PAPD4-216ENST00000515298 BHMG1C9JSJ3 638 aaPredicted RBP10.76□□□□□ -0.69
PAPD4-216ENST00000515298 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
PAPD4-216ENST00000515298 RABGEF1Q9UJ41 708 aa10.76□□□□□ -0.69
PAPD4-216ENST00000515298 TTC13Q8NBP0 860 aa10.75□□□□□ -0.69
PAPD4-216ENST00000515298 KIAA1468Q9P260 1216 aa10.75□□□□□ -0.69
PAPD4-216ENST00000515298 PADI6Q6TGC4 694 aa10.74□□□□□ -0.69
PAPD4-216ENST00000515298 HIC1Q14526 733 aa10.73□□□□□ -0.69
PAPD4-216ENST00000515298 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
PAPD4-216ENST00000515298 C3orf80F5H4A9 247 aa10.7□□□□□ -0.7
PAPD4-216ENST00000515298 GNPATO15228 680 aa10.7□□□□□ -0.7
PAPD4-216ENST00000515298 NBPF3Q9H094 633 aa10.7□□□□□ -0.7
PAPD4-216ENST00000515298 FECHP22830 423 aa10.68□□□□□ -0.7
PAPD4-216ENST00000515298 MRPL50Q8N5N7 158 aaKnown RBP10.68□□□□□ -0.7
PAPD4-216ENST00000515298 STAC3Q96MF2 364 aa10.68□□□□□ -0.7
PAPD4-216ENST00000515298 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
PAPD4-216ENST00000515298 TATDN2Q93075 761 aa10.67□□□□□ -0.7
PAPD4-216ENST00000515298 MYT1LQ9UL68 1186 aa10.67□□□□□ -0.7
PAPD4-216ENST00000515298 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
PAPD4-216ENST00000515298 MMRN1Q13201 1228 aa10.66□□□□□ -0.7
PAPD4-216ENST00000515298 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
PAPD4-216ENST00000515298 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
PAPD4-216ENST00000515298 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
PAPD4-216ENST00000515298 SMAPO00193 183 aa10.65□□□□□ -0.7
PAPD4-216ENST00000515298 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
PAPD4-216ENST00000515298 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
PAPD4-216ENST00000515298 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
PAPD4-216ENST00000515298 EYA1Q99502 592 aa10.63□□□□□ -0.71
PAPD4-216ENST00000515298 ZMYND10O75800 440 aa10.62□□□□□ -0.71
PAPD4-216ENST00000515298 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
PAPD4-216ENST00000515298 RNF166Q96A37 237 aaPredicted RBP10.61□□□□□ -0.71
PAPD4-216ENST00000515298 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
PAPD4-216ENST00000515298 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
PAPD4-216ENST00000515298 BARGINQ6ZT62 677 aa10.6□□□□□ -0.71
PAPD4-216ENST00000515298 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
PAPD4-216ENST00000515298 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
PAPD4-216ENST00000515298 OATP04181 439 aa10.58□□□□□ -0.72
PAPD4-216ENST00000515298 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
PAPD4-216ENST00000515298 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
PAPD4-216ENST00000515298 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
PAPD4-216ENST00000515298 IRF6O14896 467 aa10.57□□□□□ -0.72
PAPD4-216ENST00000515298 WNT2BQ93097 391 aa10.57□□□□□ -0.72
PAPD4-216ENST00000515298 KCTD12Q96CX2 325 aaKnown RBP10.57□□□□□ -0.72
PAPD4-216ENST00000515298 METTL3Q86U44 580 aaKnown RBP10.56□□□□□ -0.72
PAPD4-216ENST00000515298 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
PAPD4-216ENST00000515298 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
PAPD4-216ENST00000515298 SOWAHBA6NEL2 793 aa10.53□□□□□ -0.72
PAPD4-216ENST00000515298 DNAJB2P25686 324 aa10.53□□□□□ -0.72
PAPD4-216ENST00000515298 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
PAPD4-216ENST00000515298 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
PAPD4-216ENST00000515298 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
PAPD4-216ENST00000515298 CCDC102AQ96A19 550 aa10.53□□□□□ -0.72
PAPD4-216ENST00000515298 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
PAPD4-216ENST00000515298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.52□□□□□ -0.73
PAPD4-216ENST00000515298 BCAMP50895 628 aa10.51□□□□□ -0.73
PAPD4-216ENST00000515298 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
PAPD4-216ENST00000515298 LRCH3Q96II8 777 aa10.51□□□□□ -0.73
PAPD4-216ENST00000515298 TMEM134Q9H6X4 195 aa10.51□□□□□ -0.73
PAPD4-216ENST00000515298 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
PAPD4-216ENST00000515298 HDGFP51858 240 aaKnown RBP10.49□□□□□ -0.73
PAPD4-216ENST00000515298 NLRP7Q8WX94 980 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms