RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 CALRP27797 417 aaKnown RBP17.83■□□□□ 0.45
TRIO-218ENST00000512070 PRM3Q9NNZ6 103 aa17.83■□□□□ 0.45
TRIO-218ENST00000512070 CDR1P51861 262 aa17.83■□□□□ 0.44
TRIO-218ENST00000512070 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.44
TRIO-218ENST00000512070 ANO8Q9HCE9 1232 aaPredicted RBP17.83■□□□□ 0.44
TRIO-218ENST00000512070 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
TRIO-218ENST00000512070 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.44
TRIO-218ENST00000512070 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
TRIO-218ENST00000512070 ROCK1Q13464 1354 aa17.82■□□□□ 0.44
TRIO-218ENST00000512070 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
TRIO-218ENST00000512070 H3BQV1 296 aa17.82■□□□□ 0.44
TRIO-218ENST00000512070 NOM1Q5C9Z4 860 aaKnown RBP17.82■□□□□ 0.44
TRIO-218ENST00000512070 IFFO2Q5TF58 517 aa17.82■□□□□ 0.44
TRIO-218ENST00000512070 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
TRIO-218ENST00000512070 AMER1Q5JTC6 1135 aaPredicted RBP17.81■□□□□ 0.44
TRIO-218ENST00000512070 BECN2A8MW95 431 aa17.81■□□□□ 0.44
TRIO-218ENST00000512070 HSPA5P11021 654 aaKnown RBP17.81■□□□□ 0.44
TRIO-218ENST00000512070 REC8O95072 547 aa17.81■□□□□ 0.44
TRIO-218ENST00000512070 ACBD3Q9H3P7 528 aa17.8■□□□□ 0.44
TRIO-218ENST00000512070 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
TRIO-218ENST00000512070 AAMPQ13685 434 aa17.79■□□□□ 0.44
TRIO-218ENST00000512070 CUX2O14529 1486 aa17.78■□□□□ 0.44
TRIO-218ENST00000512070 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
TRIO-218ENST00000512070 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
TRIO-218ENST00000512070 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
TRIO-218ENST00000512070 APBB1O00213 710 aa17.78■□□□□ 0.44
TRIO-218ENST00000512070 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
TRIO-218ENST00000512070 FAM161AQ3B820 660 aa17.77■□□□□ 0.44
TRIO-218ENST00000512070 CGNL1Q0VF96 1302 aa17.77■□□□□ 0.43
TRIO-218ENST00000512070 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
TRIO-218ENST00000512070 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
TRIO-218ENST00000512070 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
TRIO-218ENST00000512070 SOGA1O94964 1423 aa17.75■□□□□ 0.43
TRIO-218ENST00000512070 GSE1Q14687 1217 aa17.75■□□□□ 0.43
TRIO-218ENST00000512070 MARCH6O60337 910 aa17.75■□□□□ 0.43
TRIO-218ENST00000512070 ARGLU1Q9NWB6 273 aaPredicted RBP17.75■□□□□ 0.43
TRIO-218ENST00000512070 PKD2Q13563 968 aa17.75■□□□□ 0.43
TRIO-218ENST00000512070 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
TRIO-218ENST00000512070 MAP7D2Q96T17 732 aa17.74■□□□□ 0.43
TRIO-218ENST00000512070 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
TRIO-218ENST00000512070 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
TRIO-218ENST00000512070 NUP155O75694 1391 aa17.73■□□□□ 0.43
TRIO-218ENST00000512070 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
TRIO-218ENST00000512070 AK7Q96M32 723 aa17.73■□□□□ 0.43
TRIO-218ENST00000512070 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
TRIO-218ENST00000512070 DDX49Q9Y6V7 483 aaKnown RBP17.73■□□□□ 0.43
TRIO-218ENST00000512070 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
TRIO-218ENST00000512070 RAB3GAP2Q9H2M9 1393 aa17.72■□□□□ 0.43
TRIO-218ENST00000512070 ZKSCAN1P17029 563 aaPredicted RBP17.71■□□□□ 0.43
TRIO-218ENST00000512070 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.43
TRIO-218ENST00000512070 G3V3G9 751 aa17.71■□□□□ 0.43
TRIO-218ENST00000512070 PES1O00541 588 aaKnown RBP17.71■□□□□ 0.43
TRIO-218ENST00000512070 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.43
TRIO-218ENST00000512070 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
TRIO-218ENST00000512070 E9PSI1 815 aa17.7■□□□□ 0.42
TRIO-218ENST00000512070 TRIM29Q14134 588 aa17.7■□□□□ 0.42
TRIO-218ENST00000512070 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
TRIO-218ENST00000512070 RDXP35241 583 aaKnown RBP17.7■□□□□ 0.42
TRIO-218ENST00000512070 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
TRIO-218ENST00000512070 ZBED9Q6R2W3 1325 aa17.69■□□□□ 0.42
TRIO-218ENST00000512070 RUFY1Q96T51 708 aa17.69■□□□□ 0.42
TRIO-218ENST00000512070 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
TRIO-218ENST00000512070 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
TRIO-218ENST00000512070 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
TRIO-218ENST00000512070 CWC15Q9P013 229 aaKnown RBP17.68■□□□□ 0.42
TRIO-218ENST00000512070 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
TRIO-218ENST00000512070 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
TRIO-218ENST00000512070 MYO6Q9UM54 1294 aa17.68■□□□□ 0.42
TRIO-218ENST00000512070 TCEAL9Q9UHQ7 104 aa17.68■□□□□ 0.42
TRIO-218ENST00000512070 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
TRIO-218ENST00000512070 NAT10Q9H0A0 1025 aaKnown RBP17.67■□□□□ 0.42
TRIO-218ENST00000512070 SOX12O15370 315 aa17.67■□□□□ 0.42
TRIO-218ENST00000512070 ARID3AQ99856 593 aa17.67■□□□□ 0.42
TRIO-218ENST00000512070 HSP90B2PQ58FF3 399 aa17.66■□□□□ 0.42
TRIO-218ENST00000512070 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
TRIO-218ENST00000512070 EID1Q9Y6B2 187 aa17.66■□□□□ 0.42
TRIO-218ENST00000512070 NUCB2P80303 420 aa17.66■□□□□ 0.42
TRIO-218ENST00000512070 CCAR2Q8N163 923 aaKnown RBP17.66■□□□□ 0.42
TRIO-218ENST00000512070 DIAPH3Q9NSV4 1193 aa17.65■□□□□ 0.42
TRIO-218ENST00000512070 FRAT2O75474 233 aaPredicted RBP17.65■□□□□ 0.42
TRIO-218ENST00000512070 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
TRIO-218ENST00000512070 NOL10Q9BSC4 688 aaKnown RBP17.64■□□□□ 0.41
TRIO-218ENST00000512070 FANCIQ9NVI1 1328 aa17.64■□□□□ 0.41
TRIO-218ENST00000512070 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
TRIO-218ENST00000512070 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
TRIO-218ENST00000512070 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
TRIO-218ENST00000512070 ERCC4Q92889 916 aaPredicted RBP17.63■□□□□ 0.41
TRIO-218ENST00000512070 CCDC144AA2RUR9 1427 aa17.63■□□□□ 0.41
TRIO-218ENST00000512070 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
TRIO-218ENST00000512070 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
TRIO-218ENST00000512070 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
TRIO-218ENST00000512070 CCP110O43303 1012 aa17.62■□□□□ 0.41
TRIO-218ENST00000512070 STK26Q9P289 416 aa17.61■□□□□ 0.41
TRIO-218ENST00000512070 TOMM22Q9NS69 142 aa17.61■□□□□ 0.41
TRIO-218ENST00000512070 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
TRIO-218ENST00000512070 AMPHP49418 695 aa17.61■□□□□ 0.41
TRIO-218ENST00000512070 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
TRIO-218ENST00000512070 SAFB2Q14151 953 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRIO-218ENST00000512070 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
TRIO-218ENST00000512070 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms