RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 PTPREP23469 700 aa12.58□□□□□ -0.4
GYPB-212ENST00000511198 ADGRD1Q6QNK2 874 aa12.58□□□□□ -0.4
GYPB-212ENST00000511198 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
GYPB-212ENST00000511198 EPAS1Q99814 870 aa12.58□□□□□ -0.4
GYPB-212ENST00000511198 TK2O00142 265 aa12.57□□□□□ -0.4
GYPB-212ENST00000511198 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
GYPB-212ENST00000511198 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
GYPB-212ENST00000511198 HRO43593 1189 aa12.54□□□□□ -0.4
GYPB-212ENST00000511198 MYT1LQ9UL68 1186 aa12.54□□□□□ -0.4
GYPB-212ENST00000511198 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
GYPB-212ENST00000511198 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.41
GYPB-212ENST00000511198 VPS9D1Q9Y2B5 631 aa12.52□□□□□ -0.41
GYPB-212ENST00000511198 NBR1Q14596 966 aa12.51□□□□□ -0.41
GYPB-212ENST00000511198 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
GYPB-212ENST00000511198 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
GYPB-212ENST00000511198 NACADO15069 1562 aa12.51□□□□□ -0.41
GYPB-212ENST00000511198 COL9A1P20849 921 aa12.5□□□□□ -0.41
GYPB-212ENST00000511198 GRXCR2A6NFK2 248 aa12.49□□□□□ -0.41
GYPB-212ENST00000511198 PPP1R3GB7ZBB8 358 aa12.49□□□□□ -0.41
GYPB-212ENST00000511198 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
GYPB-212ENST00000511198 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
GYPB-212ENST00000511198 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
GYPB-212ENST00000511198 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
GYPB-212ENST00000511198 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
GYPB-212ENST00000511198 CUX2O14529 1486 aa12.47□□□□□ -0.41
GYPB-212ENST00000511198 OSBPP22059 807 aa12.46□□□□□ -0.41
GYPB-212ENST00000511198 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
GYPB-212ENST00000511198 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
GYPB-212ENST00000511198 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
GYPB-212ENST00000511198 MAP3K7O43318 606 aa12.42□□□□□ -0.42
GYPB-212ENST00000511198 PROX2Q3B8N5 592 aa12.42□□□□□ -0.42
GYPB-212ENST00000511198 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
GYPB-212ENST00000511198 SEMA3EO15041 775 aa12.37□□□□□ -0.43
GYPB-212ENST00000511198 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
GYPB-212ENST00000511198 STAC3Q96MF2 364 aa12.36□□□□□ -0.43
GYPB-212ENST00000511198 ONECUT3O60422 494 aaPredicted RBP12.35□□□□□ -0.43
GYPB-212ENST00000511198 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
GYPB-212ENST00000511198 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
GYPB-212ENST00000511198 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
GYPB-212ENST00000511198 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
GYPB-212ENST00000511198 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
GYPB-212ENST00000511198 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
GYPB-212ENST00000511198 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
GYPB-212ENST00000511198 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
GYPB-212ENST00000511198 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
GYPB-212ENST00000511198 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
GYPB-212ENST00000511198 PRSS12P56730 875 aa12.29□□□□□ -0.44
GYPB-212ENST00000511198 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
GYPB-212ENST00000511198 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
GYPB-212ENST00000511198 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
GYPB-212ENST00000511198 LAPTM4BQ86VI4 370 aa12.26□□□□□ -0.45
GYPB-212ENST00000511198 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
GYPB-212ENST00000511198 PACS2Q86VP3 889 aa12.24□□□□□ -0.45
GYPB-212ENST00000511198 WNT2BQ93097 391 aa12.24□□□□□ -0.45
GYPB-212ENST00000511198 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
GYPB-212ENST00000511198 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
GYPB-212ENST00000511198 C3orf80F5H4A9 247 aa12.23□□□□□ -0.45
GYPB-212ENST00000511198 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
GYPB-212ENST00000511198 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
GYPB-212ENST00000511198 THSD4Q6ZMP0 1018 aa12.22□□□□□ -0.45
GYPB-212ENST00000511198 PTGDRQ13258 359 aa12.21□□□□□ -0.45
GYPB-212ENST00000511198 ZFRQ96KR1 1074 aaKnown RBP12.21□□□□□ -0.45
GYPB-212ENST00000511198 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
GYPB-212ENST00000511198 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
GYPB-212ENST00000511198 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
GYPB-212ENST00000511198 SMAPO00193 183 aa12.18□□□□□ -0.46
GYPB-212ENST00000511198 TATDN2Q93075 761 aa12.18□□□□□ -0.46
GYPB-212ENST00000511198 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
GYPB-212ENST00000511198 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
GYPB-212ENST00000511198 PTPN5P54829 565 aa12.17□□□□□ -0.46
GYPB-212ENST00000511198 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
GYPB-212ENST00000511198 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
GYPB-212ENST00000511198 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
GYPB-212ENST00000511198 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
GYPB-212ENST00000511198 NBPF26B4DH59 902 aa12.14□□□□□ -0.47
GYPB-212ENST00000511198 BCAMP50895 628 aa12.14□□□□□ -0.47
GYPB-212ENST00000511198 NUDT18Q6ZVK8 323 aa12.14□□□□□ -0.47
GYPB-212ENST00000511198 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
GYPB-212ENST00000511198 FCHSD2O94868 740 aa12.11□□□□□ -0.47
GYPB-212ENST00000511198 GPR37O15354 613 aa12.09□□□□□ -0.47
GYPB-212ENST00000511198 EYA1Q99502 592 aa12.09□□□□□ -0.47
GYPB-212ENST00000511198 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.08□□□□□ -0.48
GYPB-212ENST00000511198 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
GYPB-212ENST00000511198 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
GYPB-212ENST00000511198 WBP1LQ9NX94 342 aa12.06□□□□□ -0.48
GYPB-212ENST00000511198 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
GYPB-212ENST00000511198 HIC1Q14526 733 aa12.05□□□□□ -0.48
GYPB-212ENST00000511198 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
GYPB-212ENST00000511198 FECHP22830 423 aa12.03□□□□□ -0.48
GYPB-212ENST00000511198 FAM161AQ3B820 660 aa12.03□□□□□ -0.48
GYPB-212ENST00000511198 TSR3Q9UJK0 312 aaKnown RBP12.03□□□□□ -0.48
GYPB-212ENST00000511198 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
GYPB-212ENST00000511198 GNPATO15228 680 aa12.01□□□□□ -0.49
GYPB-212ENST00000511198 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
GYPB-212ENST00000511198 GPIHBP1Q8IV16 184 aa12□□□□□ -0.49
GYPB-212ENST00000511198 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
GYPB-212ENST00000511198 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
GYPB-212ENST00000511198 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
GYPB-212ENST00000511198 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
GYPB-212ENST00000511198 PPP4CP60510 307 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms