RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CAGE1Q8TC20 777 aa10.27□□□□□ -0.77
HTT-208ENST00000510626 RGL3Q3MIN7 710 aa10.27□□□□□ -0.77
HTT-208ENST00000510626 E9PSI1 815 aa10.27□□□□□ -0.77
HTT-208ENST00000510626 IPO7O95373 1038 aaKnown RBP10.27□□□□□ -0.77
HTT-208ENST00000510626 ERCC4Q92889 916 aaPredicted RBP10.27□□□□□ -0.77
HTT-208ENST00000510626 DCTN1Q14203 1278 aa10.27□□□□□ -0.77
HTT-208ENST00000510626 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
HTT-208ENST00000510626 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
HTT-208ENST00000510626 HDGFL2Q7Z4V5 671 aaPredicted RBP10.26□□□□□ -0.77
HTT-208ENST00000510626 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
HTT-208ENST00000510626 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
HTT-208ENST00000510626 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
HTT-208ENST00000510626 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
HTT-208ENST00000510626 MFAP1P55081 439 aaKnown RBP10.26□□□□□ -0.77
HTT-208ENST00000510626 DDX49Q9Y6V7 483 aaKnown RBP10.25□□□□□ -0.77
HTT-208ENST00000510626 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
HTT-208ENST00000510626 KIF7Q2M1P5 1343 aa10.25□□□□□ -0.77
HTT-208ENST00000510626 HSP90B2PQ58FF3 399 aa10.25□□□□□ -0.77
HTT-208ENST00000510626 RRP1P56182 461 aaKnown RBP10.25□□□□□ -0.77
HTT-208ENST00000510626 BECN2A8MW95 431 aa10.24□□□□□ -0.77
HTT-208ENST00000510626 FAM107BQ9H098 131 aa10.24□□□□□ -0.77
HTT-208ENST00000510626 U2SURPO15042 1029 aaKnown RBP10.24□□□□□ -0.77
HTT-208ENST00000510626 STK31Q9BXU1 1019 aa10.24□□□□□ -0.77
HTT-208ENST00000510626 NAT10Q9H0A0 1025 aaKnown RBP10.24□□□□□ -0.77
HTT-208ENST00000510626 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
HTT-208ENST00000510626 RUFY2Q8WXA3 655 aa10.24□□□□□ -0.77
HTT-208ENST00000510626 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
HTT-208ENST00000510626 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
HTT-208ENST00000510626 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
HTT-208ENST00000510626 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
HTT-208ENST00000510626 MBD3O95983 291 aa10.23□□□□□ -0.77
HTT-208ENST00000510626 CCDC173Q0VFZ6 552 aa10.22□□□□□ -0.77
HTT-208ENST00000510626 TERF2IPQ9NYB0 399 aa10.22□□□□□ -0.77
HTT-208ENST00000510626 CARMIL1Q5VZK9 1371 aa10.22□□□□□ -0.77
HTT-208ENST00000510626 MYO6Q9UM54 1294 aa10.22□□□□□ -0.77
HTT-208ENST00000510626 SMC4Q9NTJ3 1288 aa10.22□□□□□ -0.77
HTT-208ENST00000510626 MCM2P49736 904 aa10.21□□□□□ -0.77
HTT-208ENST00000510626 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.77
HTT-208ENST00000510626 MCM5P33992 734 aa10.21□□□□□ -0.78
HTT-208ENST00000510626 FAM13BQ9NYF5 915 aa10.21□□□□□ -0.78
HTT-208ENST00000510626 H3BQV1 296 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
HTT-208ENST00000510626 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 DDX19BQ9UMR2 479 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 SCAPERQ9BY12 1400 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 RRP12Q5JTH9 1297 aaKnown RBP10.2□□□□□ -0.78
HTT-208ENST00000510626 CEP89Q96ST8 783 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 APPP05067 770 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 ZKSCAN2Q63HK3 967 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 WASHC2AQ641Q2 1341 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 WASHC2CQ9Y4E1 1318 aa10.2□□□□□ -0.78
HTT-208ENST00000510626 UBE2Q2Q8WVN8 375 aa10.19□□□□□ -0.78
HTT-208ENST00000510626 U2AF1L5P0DN76 240 aaPredicted RBP10.19□□□□□ -0.78
HTT-208ENST00000510626 U2AF1Q01081 240 aaKnown RBP eCLIP10.19□□□□□ -0.78
HTT-208ENST00000510626 RDXP35241 583 aaKnown RBP10.19□□□□□ -0.78
HTT-208ENST00000510626 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
HTT-208ENST00000510626 MPHOSPH9Q99550 1183 aa10.19□□□□□ -0.78
HTT-208ENST00000510626 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
HTT-208ENST00000510626 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
HTT-208ENST00000510626 CCDC191Q8NCU4 936 aa10.18□□□□□ -0.78
HTT-208ENST00000510626 FAM184AQ8NB25 1140 aa10.18□□□□□ -0.78
HTT-208ENST00000510626 TUBB4BP68371 445 aa10.18□□□□□ -0.78
HTT-208ENST00000510626 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
HTT-208ENST00000510626 ZKSCAN1P17029 563 aaPredicted RBP10.17□□□□□ -0.78
HTT-208ENST00000510626 CWC22Q9HCG8 908 aaKnown RBP10.17□□□□□ -0.78
HTT-208ENST00000510626 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
HTT-208ENST00000510626 KIF2AO00139 706 aaPredicted RBP10.17□□□□□ -0.78
HTT-208ENST00000510626 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
HTT-208ENST00000510626 POLR3GO15318 223 aaPredicted RBP10.16□□□□□ -0.78
HTT-208ENST00000510626 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
HTT-208ENST00000510626 CIZ1Q9ULV3 898 aaPredicted RBP10.16□□□□□ -0.78
HTT-208ENST00000510626 RUFY1Q96T51 708 aa10.16□□□□□ -0.78
HTT-208ENST00000510626 MIA2Q96PC5 1412 aa10.16□□□□□ -0.78
HTT-208ENST00000510626 GOLGA6L7A0A1B0GV03 622 aa10.16□□□□□ -0.78
HTT-208ENST00000510626 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
HTT-208ENST00000510626 CT47B1P0C2W7 299 aaPredicted RBP10.16□□□□□ -0.78
HTT-208ENST00000510626 INTS3Q68E01 1043 aaKnown RBP10.15□□□□□ -0.78
HTT-208ENST00000510626 PDCP20941 246 aa10.15□□□□□ -0.78
HTT-208ENST00000510626 MNS1Q8NEH6 495 aa10.15□□□□□ -0.78
HTT-208ENST00000510626 LEKR1Q6ZMV7 388 aa10.15□□□□□ -0.78
HTT-208ENST00000510626 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.15□□□□□ -0.78
HTT-208ENST00000510626 PKD2Q13563 968 aa10.15□□□□□ -0.78
HTT-208ENST00000510626 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.78
HTT-208ENST00000510626 TXLNBQ8N3L3 684 aa10.15□□□□□ -0.78
HTT-208ENST00000510626 CNTLNQ9NXG0 1405 aa10.15□□□□□ -0.78
HTT-208ENST00000510626 HOMER1Q86YM7 354 aa10.15□□□□□ -0.79
HTT-208ENST00000510626 NFKBIBQ15653 356 aa10.15□□□□□ -0.79
HTT-208ENST00000510626 CTR9Q6PD62 1173 aa10.14□□□□□ -0.79
HTT-208ENST00000510626 INCENPQ9NQS7 918 aa10.14□□□□□ -0.79
HTT-208ENST00000510626 TPD52L1Q16890 204 aaPredicted RBP10.14□□□□□ -0.79
HTT-208ENST00000510626 BRD4O60885 1362 aaPredicted RBP10.14□□□□□ -0.79
HTT-208ENST00000510626 HSP90AB4PQ58FF6 505 aa10.14□□□□□ -0.79
HTT-208ENST00000510626 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
HTT-208ENST00000510626 PDCL3Q9H2J4 239 aa10.13□□□□□ -0.79
HTT-208ENST00000510626 PRKRIP1Q9H875 184 aaPredicted RBP10.13□□□□□ -0.79
HTT-208ENST00000510626 NPHP1O15259 732 aa10.13□□□□□ -0.79
HTT-208ENST00000510626 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
HTT-208ENST00000510626 ZRSR2Q15696 482 aaKnown RBP10.12□□□□□ -0.79
HTT-208ENST00000510626 RABEP1Q15276 862 aa10.12□□□□□ -0.79
HTT-208ENST00000510626 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms