RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 CALD1Q05682 793 aaKnown RBP11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 GSE1Q14687 1217 aa11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 CECR2Q9BXF3 1484 aa11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 MYO15BQ96JP2 1530 aa11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 CTDP1Q9Y5B0 961 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF28-210ENST00000510312 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
ARHGEF28-210ENST00000510312 NACADO15069 1562 aa11.12□□□□□ -0.63
ARHGEF28-210ENST00000510312 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
ARHGEF28-210ENST00000510312 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
ARHGEF28-210ENST00000510312 SAMD1Q6SPF0 538 aaPredicted RBP11.12□□□□□ -0.63
ARHGEF28-210ENST00000510312 NUP155O75694 1391 aa11.12□□□□□ -0.63
ARHGEF28-210ENST00000510312 SMC4Q9NTJ3 1288 aa11.11□□□□□ -0.63
ARHGEF28-210ENST00000510312 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
ARHGEF28-210ENST00000510312 FHAD1B1AJZ9 1412 aa11.11□□□□□ -0.63
ARHGEF28-210ENST00000510312 SETQ01105 290 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF28-210ENST00000510312 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
ARHGEF28-210ENST00000510312 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
ARHGEF28-210ENST00000510312 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 SOGA1O94964 1423 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 GOLGA6L1Q8N7Z2 621 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 PHF14O94880 888 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 SKOR2Q2VWA4 1001 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
ARHGEF28-210ENST00000510312 TNIKQ9UKE5 1360 aa11.09□□□□□ -0.63
ARHGEF28-210ENST00000510312 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
ARHGEF28-210ENST00000510312 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 GZF1Q9H116 711 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 ARID3AQ99856 593 aa11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 CNKSR2Q8WXI2 1034 aa11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
ARHGEF28-210ENST00000510312 EIF2S2P20042 333 aaKnown RBP11.07□□□□□ -0.64
ARHGEF28-210ENST00000510312 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
ARHGEF28-210ENST00000510312 ELL2O00472 640 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 TAF3Q5VWG9 929 aa11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 TPM4P67936 248 aa11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 TPM2P07951 284 aa11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 PSME1Q06323 249 aa11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 NOL10Q9BSC4 688 aaKnown RBP11.06□□□□□ -0.64
ARHGEF28-210ENST00000510312 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF28-210ENST00000510312 RILPL2Q969X0 211 aa11.05□□□□□ -0.64
ARHGEF28-210ENST00000510312 PPP1R1BQ9UD71 204 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF28-210ENST00000510312 SETD5Q9C0A6 1442 aa11.04□□□□□ -0.64
ARHGEF28-210ENST00000510312 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
ARHGEF28-210ENST00000510312 CEP89Q96ST8 783 aa11.04□□□□□ -0.64
ARHGEF28-210ENST00000510312 RRP9O43818 475 aaKnown RBP11.03□□□□□ -0.64
ARHGEF28-210ENST00000510312 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
ARHGEF28-210ENST00000510312 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF28-210ENST00000510312 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
ARHGEF28-210ENST00000510312 RCAN3Q9UKA8 241 aa11.03□□□□□ -0.64
ARHGEF28-210ENST00000510312 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
ARHGEF28-210ENST00000510312 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.64
ARHGEF28-210ENST00000510312 NOM1Q5C9Z4 860 aaKnown RBP11.02□□□□□ -0.64
ARHGEF28-210ENST00000510312 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.64
ARHGEF28-210ENST00000510312 HMMRO75330 724 aa11.02□□□□□ -0.64
ARHGEF28-210ENST00000510312 COG3Q96JB2 828 aa11.02□□□□□ -0.64
ARHGEF28-210ENST00000510312 GPS2Q13227 327 aa11.02□□□□□ -0.65
ARHGEF28-210ENST00000510312 TPD52L1Q16890 204 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF28-210ENST00000510312 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
ARHGEF28-210ENST00000510312 AMOTL1Q8IY63 956 aa11.01□□□□□ -0.65
ARHGEF28-210ENST00000510312 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
ARHGEF28-210ENST00000510312 SF3A1Q15459 793 aaKnown RBP11.01□□□□□ -0.65
ARHGEF28-210ENST00000510312 NUTM2GQ5VZR2 741 aa11.01□□□□□ -0.65
ARHGEF28-210ENST00000510312 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
ARHGEF28-210ENST00000510312 TEX35Q5T0J7 233 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 ABCC8Q09428 1581 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 FYB1O15117 783 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 CHMP4AQ9BY43 222 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 PDE3BQ13370 1112 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
ARHGEF28-210ENST00000510312 ATF3P18847 181 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 FOXD4L6Q3SYB3 417 aaPredicted RBP11□□□□□ -0.65
ARHGEF28-210ENST00000510312 FOXD4L3Q6VB84 417 aaPredicted RBP11□□□□□ -0.65
ARHGEF28-210ENST00000510312 TEFQ10587 303 aa11□□□□□ -0.65
ARHGEF28-210ENST00000510312 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 H3BQV1 296 aa10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 APPP05067 770 aa10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 HDAC5Q9UQL6 1122 aa10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 BAZ1AQ9NRL2 1556 aaPredicted RBP10.99□□□□□ -0.65
ARHGEF28-210ENST00000510312 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
ARHGEF28-210ENST00000510312 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
ARHGEF28-210ENST00000510312 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF28-210ENST00000510312 NUTM2EB1AL46 878 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms