RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
COL6A4P2-205ENST00000509855 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
COL6A4P2-205ENST00000509855 FCHSD2O94868 740 aa13.64□□□□□ -0.23
COL6A4P2-205ENST00000509855 NPDC1Q9NQX5 325 aaPredicted RBP13.64□□□□□ -0.23
COL6A4P2-205ENST00000509855 HIC1Q14526 733 aa13.63□□□□□ -0.23
COL6A4P2-205ENST00000509855 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
COL6A4P2-205ENST00000509855 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
COL6A4P2-205ENST00000509855 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
COL6A4P2-205ENST00000509855 GNPATO15228 680 aa13.6□□□□□ -0.23
COL6A4P2-205ENST00000509855 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
COL6A4P2-205ENST00000509855 PTPREP23469 700 aa13.59□□□□□ -0.23
COL6A4P2-205ENST00000509855 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
COL6A4P2-205ENST00000509855 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
COL6A4P2-205ENST00000509855 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
COL6A4P2-205ENST00000509855 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
COL6A4P2-205ENST00000509855 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
COL6A4P2-205ENST00000509855 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
COL6A4P2-205ENST00000509855 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
COL6A4P2-205ENST00000509855 COL9A1P20849 921 aa13.53□□□□□ -0.24
COL6A4P2-205ENST00000509855 PBX2P40425 430 aa13.53□□□□□ -0.24
COL6A4P2-205ENST00000509855 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
COL6A4P2-205ENST00000509855 ARHGAP33O14559 1287 aa13.51□□□□□ -0.25
COL6A4P2-205ENST00000509855 FECHP22830 423 aa13.51□□□□□ -0.25
COL6A4P2-205ENST00000509855 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
COL6A4P2-205ENST00000509855 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
COL6A4P2-205ENST00000509855 KCNK17Q96T54 332 aa13.51□□□□□ -0.25
COL6A4P2-205ENST00000509855 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
COL6A4P2-205ENST00000509855 PRSS12P56730 875 aa13.49□□□□□ -0.25
COL6A4P2-205ENST00000509855 SLC24A3Q9HC58 644 aa13.49□□□□□ -0.25
COL6A4P2-205ENST00000509855 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
COL6A4P2-205ENST00000509855 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
COL6A4P2-205ENST00000509855 IRF6O14896 467 aa13.46□□□□□ -0.25
COL6A4P2-205ENST00000509855 PSEN2P49810 448 aa13.46□□□□□ -0.25
COL6A4P2-205ENST00000509855 PADI6Q6TGC4 694 aa13.46□□□□□ -0.25
COL6A4P2-205ENST00000509855 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
COL6A4P2-205ENST00000509855 AK7Q96M32 723 aa13.45□□□□□ -0.26
COL6A4P2-205ENST00000509855 ZBED2Q9BTP6 218 aa13.45□□□□□ -0.26
COL6A4P2-205ENST00000509855 SLC4A5Q9BY07 1137 aa13.45□□□□□ -0.26
COL6A4P2-205ENST00000509855 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
COL6A4P2-205ENST00000509855 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
COL6A4P2-205ENST00000509855 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
COL6A4P2-205ENST00000509855 CCDC102AQ96A19 550 aa13.42□□□□□ -0.26
COL6A4P2-205ENST00000509855 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
COL6A4P2-205ENST00000509855 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
COL6A4P2-205ENST00000509855 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
COL6A4P2-205ENST00000509855 ADGRG1Q9Y653 693 aa13.4□□□□□ -0.26
COL6A4P2-205ENST00000509855 PROX2Q3B8N5 592 aa13.39□□□□□ -0.27
COL6A4P2-205ENST00000509855 TRIM66O15016 1216 aa13.37□□□□□ -0.27
COL6A4P2-205ENST00000509855 TK2O00142 265 aa13.36□□□□□ -0.27
COL6A4P2-205ENST00000509855 OATP04181 439 aa13.36□□□□□ -0.27
COL6A4P2-205ENST00000509855 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL6A4P2-205ENST00000509855 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
COL6A4P2-205ENST00000509855 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
COL6A4P2-205ENST00000509855 PACS2Q86VP3 889 aa13.35□□□□□ -0.27
COL6A4P2-205ENST00000509855 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
COL6A4P2-205ENST00000509855 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
COL6A4P2-205ENST00000509855 AMHR2Q16671 573 aa13.34□□□□□ -0.27
COL6A4P2-205ENST00000509855 POTEMA6NI47 508 aa13.33□□□□□ -0.28
COL6A4P2-205ENST00000509855 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
COL6A4P2-205ENST00000509855 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
COL6A4P2-205ENST00000509855 FAM161AQ3B820 660 aa13.32□□□□□ -0.28
COL6A4P2-205ENST00000509855 EYA1Q99502 592 aa13.32□□□□□ -0.28
COL6A4P2-205ENST00000509855 RBM46Q8TBY0 533 aaKnown RBP13.31□□□□□ -0.28
COL6A4P2-205ENST00000509855 TATDN2Q93075 761 aa13.31□□□□□ -0.28
COL6A4P2-205ENST00000509855 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
COL6A4P2-205ENST00000509855 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
COL6A4P2-205ENST00000509855 PHOX2BQ99453 314 aa13.3□□□□□ -0.28
COL6A4P2-205ENST00000509855 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
COL6A4P2-205ENST00000509855 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
COL6A4P2-205ENST00000509855 PDE4DQ08499 809 aa13.29□□□□□ -0.28
COL6A4P2-205ENST00000509855 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
COL6A4P2-205ENST00000509855 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
COL6A4P2-205ENST00000509855 BHMG1C9JSJ3 638 aaPredicted RBP13.28□□□□□ -0.28
COL6A4P2-205ENST00000509855 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
COL6A4P2-205ENST00000509855 BRPF1P55201 1214 aaPredicted RBP13.27□□□□□ -0.29
COL6A4P2-205ENST00000509855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.25□□□□□ -0.29
COL6A4P2-205ENST00000509855 HRO43593 1189 aa13.25□□□□□ -0.29
COL6A4P2-205ENST00000509855 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
COL6A4P2-205ENST00000509855 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
COL6A4P2-205ENST00000509855 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
COL6A4P2-205ENST00000509855 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
COL6A4P2-205ENST00000509855 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
COL6A4P2-205ENST00000509855 SMAPO00193 183 aa13.22□□□□□ -0.29
COL6A4P2-205ENST00000509855 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
COL6A4P2-205ENST00000509855 DNAJB2P25686 324 aa13.21□□□□□ -0.29
COL6A4P2-205ENST00000509855 CLCN1P35523 988 aa13.21□□□□□ -0.29
COL6A4P2-205ENST00000509855 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
COL6A4P2-205ENST00000509855 ANKRD13DQ6ZTN6 518 aa13.21□□□□□ -0.29
COL6A4P2-205ENST00000509855 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
COL6A4P2-205ENST00000509855 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
COL6A4P2-205ENST00000509855 SEPT9Q9UHD8 586 aaPredicted RBP13.2□□□□□ -0.3
COL6A4P2-205ENST00000509855 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
COL6A4P2-205ENST00000509855 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
COL6A4P2-205ENST00000509855 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
COL6A4P2-205ENST00000509855 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
COL6A4P2-205ENST00000509855 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
COL6A4P2-205ENST00000509855 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
COL6A4P2-205ENST00000509855 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
COL6A4P2-205ENST00000509855 NLRP7Q8WX94 980 aa13.16□□□□□ -0.3
COL6A4P2-205ENST00000509855 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms