RNA–Protein interactions for RNA: ENST00000508099.5

LINC02428-201, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-201ENST00000508099 PHF14O94880 888 aa12.9□□□□□ -0.34
LINC02428-201ENST00000508099 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
LINC02428-201ENST00000508099 COL9A1P20849 921 aa12.89□□□□□ -0.35
LINC02428-201ENST00000508099 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
LINC02428-201ENST00000508099 LAPTM4BQ86VI4 370 aa12.87□□□□□ -0.35
LINC02428-201ENST00000508099 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
LINC02428-201ENST00000508099 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
LINC02428-201ENST00000508099 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
LINC02428-201ENST00000508099 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
LINC02428-201ENST00000508099 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.36
LINC02428-201ENST00000508099 EPAS1Q99814 870 aa12.83□□□□□ -0.36
LINC02428-201ENST00000508099 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
LINC02428-201ENST00000508099 BCAMP50895 628 aa12.82□□□□□ -0.36
LINC02428-201ENST00000508099 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
LINC02428-201ENST00000508099 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
LINC02428-201ENST00000508099 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
LINC02428-201ENST00000508099 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
LINC02428-201ENST00000508099 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
LINC02428-201ENST00000508099 DPYSL4O14531 572 aa12.75□□□□□ -0.37
LINC02428-201ENST00000508099 SEPT9Q9UHD8 586 aaPredicted RBP12.74□□□□□ -0.37
LINC02428-201ENST00000508099 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
LINC02428-201ENST00000508099 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
LINC02428-201ENST00000508099 KCNC4Q03721 635 aa12.7□□□□□ -0.38
LINC02428-201ENST00000508099 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
LINC02428-201ENST00000508099 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
LINC02428-201ENST00000508099 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
LINC02428-201ENST00000508099 TSR3Q9UJK0 312 aaKnown RBP12.68□□□□□ -0.38
LINC02428-201ENST00000508099 DDX12PQ92771 950 aa12.67□□□□□ -0.38
LINC02428-201ENST00000508099 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
LINC02428-201ENST00000508099 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
LINC02428-201ENST00000508099 PACS2Q86VP3 889 aa12.63□□□□□ -0.39
LINC02428-201ENST00000508099 NBR1Q14596 966 aa12.62□□□□□ -0.39
LINC02428-201ENST00000508099 PDIA6Q15084 440 aa12.62□□□□□ -0.39
LINC02428-201ENST00000508099 MAP3K7O43318 606 aa12.61□□□□□ -0.39
LINC02428-201ENST00000508099 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
LINC02428-201ENST00000508099 Q6ZNB5 142 aa12.59□□□□□ -0.39
LINC02428-201ENST00000508099 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
LINC02428-201ENST00000508099 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
LINC02428-201ENST00000508099 PPP4CP60510 307 aa12.55□□□□□ -0.4
LINC02428-201ENST00000508099 LAPTM4AQ15012 233 aa12.54□□□□□ -0.4
LINC02428-201ENST00000508099 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
LINC02428-201ENST00000508099 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
LINC02428-201ENST00000508099 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
LINC02428-201ENST00000508099 PRSS12P56730 875 aa12.52□□□□□ -0.41
LINC02428-201ENST00000508099 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
LINC02428-201ENST00000508099 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
LINC02428-201ENST00000508099 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
LINC02428-201ENST00000508099 SMAPO00193 183 aa12.48□□□□□ -0.41
LINC02428-201ENST00000508099 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
LINC02428-201ENST00000508099 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
LINC02428-201ENST00000508099 E2F4Q16254 413 aa12.46□□□□□ -0.41
LINC02428-201ENST00000508099 TATDN2Q93075 761 aa12.45□□□□□ -0.42
LINC02428-201ENST00000508099 IL21Q9HBE4 155 aa12.45□□□□□ -0.42
LINC02428-201ENST00000508099 MTRQ99707 1265 aa12.44□□□□□ -0.42
LINC02428-201ENST00000508099 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
LINC02428-201ENST00000508099 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
LINC02428-201ENST00000508099 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
LINC02428-201ENST00000508099 GRXCR2A6NFK2 248 aa12.42□□□□□ -0.42
LINC02428-201ENST00000508099 GFRA3O60609 400 aa12.42□□□□□ -0.42
LINC02428-201ENST00000508099 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
LINC02428-201ENST00000508099 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
LINC02428-201ENST00000508099 PRKD2Q9BZL6 878 aa12.41□□□□□ -0.42
LINC02428-201ENST00000508099 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
LINC02428-201ENST00000508099 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
LINC02428-201ENST00000508099 V9GY48 417 aaPredicted RBP12.38□□□□□ -0.43
LINC02428-201ENST00000508099 LCE2BO14633 110 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 RNF40O75150 1001 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 CDHR5Q9HBB8 845 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
LINC02428-201ENST00000508099 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.37□□□□□ -0.43
LINC02428-201ENST00000508099 NRG2O14511 850 aaPredicted RBP12.36□□□□□ -0.43
LINC02428-201ENST00000508099 OSBPP22059 807 aa12.36□□□□□ -0.43
LINC02428-201ENST00000508099 APLP1P51693 650 aa12.34□□□□□ -0.43
LINC02428-201ENST00000508099 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
LINC02428-201ENST00000508099 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.34□□□□□ -0.43
LINC02428-201ENST00000508099 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
LINC02428-201ENST00000508099 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
LINC02428-201ENST00000508099 GGCXP38435 758 aa12.28□□□□□ -0.44
LINC02428-201ENST00000508099 PADI6Q6TGC4 694 aa12.28□□□□□ -0.44
LINC02428-201ENST00000508099 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
LINC02428-201ENST00000508099 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
LINC02428-201ENST00000508099 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
LINC02428-201ENST00000508099 NPDC1Q9NQX5 325 aaPredicted RBP12.26□□□□□ -0.45
LINC02428-201ENST00000508099 COPS2P61201 443 aa12.24□□□□□ -0.45
LINC02428-201ENST00000508099 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
LINC02428-201ENST00000508099 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
LINC02428-201ENST00000508099 PDZRN3Q9UPQ7 1066 aa12.23□□□□□ -0.45
LINC02428-201ENST00000508099 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
LINC02428-201ENST00000508099 PRR14Q9BWN1 585 aa12.22□□□□□ -0.45
LINC02428-201ENST00000508099 ZPR1O75312 459 aa12.2□□□□□ -0.46
LINC02428-201ENST00000508099 EYA1Q99502 592 aa12.2□□□□□ -0.46
LINC02428-201ENST00000508099 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
LINC02428-201ENST00000508099 PCDHB3Q9Y5E6 796 aa12.17□□□□□ -0.46
LINC02428-201ENST00000508099 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
LINC02428-201ENST00000508099 DNAJB2P25686 324 aa12.12□□□□□ -0.47
LINC02428-201ENST00000508099 BLOC1S3Q6QNY0 202 aa12.11□□□□□ -0.47
LINC02428-201ENST00000508099 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms