RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 REPIN1Q9BWE0 567 aaKnown RBP6.28□□□□□ -1.4
CCDC30-212ENST00000507855 AXIN2Q9Y2T1 843 aa6.28□□□□□ -1.4
CCDC30-212ENST00000507855 C6orf132Q5T0Z8 1188 aa6.27□□□□□ -1.41
CCDC30-212ENST00000507855 MAMSTRQ6ZN01 415 aa6.27□□□□□ -1.41
CCDC30-212ENST00000507855 CCDC102AQ96A19 550 aa6.27□□□□□ -1.41
CCDC30-212ENST00000507855 JPH4Q96JJ6 628 aa6.27□□□□□ -1.41
CCDC30-212ENST00000507855 HOXB1P14653 301 aaPredicted RBP6.27□□□□□ -1.41
CCDC30-212ENST00000507855 KRI1Q8N9T8 703 aaKnown RBP6.27□□□□□ -1.41
CCDC30-212ENST00000507855 TRIM66O15016 1216 aa6.26□□□□□ -1.41
CCDC30-212ENST00000507855 GNPATO15228 680 aa6.26□□□□□ -1.41
CCDC30-212ENST00000507855 TYW1BQ6NUM6 668 aa6.25□□□□□ -1.41
CCDC30-212ENST00000507855 ZDHHC16Q969W1 377 aa6.25□□□□□ -1.41
CCDC30-212ENST00000507855 IRF6O14896 467 aa6.25□□□□□ -1.41
CCDC30-212ENST00000507855 PSEN2P49810 448 aa6.25□□□□□ -1.41
CCDC30-212ENST00000507855 NEUROD2Q15784 382 aa6.25□□□□□ -1.41
CCDC30-212ENST00000507855 FAM163AQ96GL9 167 aaPredicted RBP6.25□□□□□ -1.41
CCDC30-212ENST00000507855 ZNF316A6NFI3 1004 aaPredicted RBP6.24□□□□□ -1.41
CCDC30-212ENST00000507855 PROX2Q3B8N5 592 aa6.24□□□□□ -1.41
CCDC30-212ENST00000507855 PADI6Q6TGC4 694 aa6.24□□□□□ -1.41
CCDC30-212ENST00000507855 FCHSD2O94868 740 aa6.23□□□□□ -1.41
CCDC30-212ENST00000507855 HIC1Q14526 733 aa6.23□□□□□ -1.41
CCDC30-212ENST00000507855 VARS2Q5ST30 1063 aaKnown RBP6.23□□□□□ -1.41
CCDC30-212ENST00000507855 SMAPO00193 183 aa6.22□□□□□ -1.41
CCDC30-212ENST00000507855 PDE4DQ08499 809 aa6.22□□□□□ -1.41
CCDC30-212ENST00000507855 MAP2K5Q13163 448 aa6.22□□□□□ -1.41
CCDC30-212ENST00000507855 TSKSQ9UJT2 592 aa6.22□□□□□ -1.41
CCDC30-212ENST00000507855 FAM205CA6NFA0 338 aa6.21□□□□□ -1.41
CCDC30-212ENST00000507855 RIMBP2O15034 1052 aa6.21□□□□□ -1.41
CCDC30-212ENST00000507855 AK7Q96M32 723 aa6.21□□□□□ -1.41
CCDC30-212ENST00000507855 EPAS1Q99814 870 aa6.21□□□□□ -1.41
CCDC30-212ENST00000507855 ZSWIM6Q9HCJ5 1215 aa6.21□□□□□ -1.41
CCDC30-212ENST00000507855 DMRTA1Q5VZB9 504 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 PARP9Q8IXQ6 854 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 FAM117AQ9C073 453 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 IL27Q8NEV9 243 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 CDCA7LQ96GN5 454 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 KCNK17Q96T54 332 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 KDM4CQ9H3R0 1056 aa6.2□□□□□ -1.42
CCDC30-212ENST00000507855 FBXW7Q969H0 707 aa6.19□□□□□ -1.42
CCDC30-212ENST00000507855 BCL2L12Q9HB09 334 aa6.19□□□□□ -1.42
CCDC30-212ENST00000507855 MINK1Q8N4C8 1332 aaPredicted RBP6.18□□□□□ -1.42
CCDC30-212ENST00000507855 MS4A1P11836 297 aa6.18□□□□□ -1.42
CCDC30-212ENST00000507855 TTC13Q8NBP0 860 aa6.18□□□□□ -1.42
CCDC30-212ENST00000507855 ADGRG1Q9Y653 693 aa6.18□□□□□ -1.42
CCDC30-212ENST00000507855 EMP3P54852 163 aa6.17□□□□□ -1.42
CCDC30-212ENST00000507855 ERBB3P21860 1342 aa6.17□□□□□ -1.42
CCDC30-212ENST00000507855 MDM2Q00987 491 aaPredicted RBP6.17□□□□□ -1.42
CCDC30-212ENST00000507855 METTL3Q86U44 580 aaKnown RBP6.17□□□□□ -1.42
CCDC30-212ENST00000507855 PLEKHG3A1L390 1219 aa6.16□□□□□ -1.42
CCDC30-212ENST00000507855 PRSS12P56730 875 aa6.16□□□□□ -1.42
CCDC30-212ENST00000507855 PPP4R3BQ5MIZ7 849 aa6.16□□□□□ -1.42
CCDC30-212ENST00000507855 SNPHO15079 494 aa6.16□□□□□ -1.42
CCDC30-212ENST00000507855 HS3ST6Q96QI5 342 aa6.16□□□□□ -1.42
CCDC30-212ENST00000507855 PCDH10Q9P2E7 1040 aa6.16□□□□□ -1.42
CCDC30-212ENST00000507855 SEPT9Q9UHD8 586 aaPredicted RBP6.15□□□□□ -1.42
CCDC30-212ENST00000507855 PXYLP1Q8TE99 480 aa6.15□□□□□ -1.43
CCDC30-212ENST00000507855 AMHR2Q16671 573 aa6.14□□□□□ -1.43
CCDC30-212ENST00000507855 NUDT18Q6ZVK8 323 aa6.14□□□□□ -1.43
CCDC30-212ENST00000507855 PTPREP23469 700 aa6.14□□□□□ -1.43
CCDC30-212ENST00000507855 TTLL12Q14166 644 aaPredicted RBP6.14□□□□□ -1.43
CCDC30-212ENST00000507855 GIGYF2Q6Y7W6 1299 aaKnown RBP6.14□□□□□ -1.43
CCDC30-212ENST00000507855 ZBED2Q9BTP6 218 aa6.14□□□□□ -1.43
CCDC30-212ENST00000507855 TMUB1Q9BVT8 246 aa6.13□□□□□ -1.43
CCDC30-212ENST00000507855 PPP1R3GB7ZBB8 358 aa6.13□□□□□ -1.43
CCDC30-212ENST00000507855 EYA1Q99502 592 aa6.13□□□□□ -1.43
CCDC30-212ENST00000507855 KIAA1468Q9P260 1216 aa6.13□□□□□ -1.43
CCDC30-212ENST00000507855 FBXO31Q5XUX0 539 aaPredicted RBP6.11□□□□□ -1.43
CCDC30-212ENST00000507855 TRIM6-TRIM34B2RNG4 842 aa6.11□□□□□ -1.43
CCDC30-212ENST00000507855 RCCD1A6NED2 376 aa6.1□□□□□ -1.43
CCDC30-212ENST00000507855 TATDN2Q93075 761 aa6.1□□□□□ -1.43
CCDC30-212ENST00000507855 PNMA3Q9UL41 463 aa6.1□□□□□ -1.43
CCDC30-212ENST00000507855 ARHGAP33O14559 1287 aa6.09□□□□□ -1.43
CCDC30-212ENST00000507855 ZNF687Q8N1G0 1237 aa6.09□□□□□ -1.43
CCDC30-212ENST00000507855 ONECUT3O60422 494 aaPredicted RBP6.08□□□□□ -1.44
CCDC30-212ENST00000507855 MYT1Q01538 1121 aa6.08□□□□□ -1.44
CCDC30-212ENST00000507855 VPS9D1Q9Y2B5 631 aa6.08□□□□□ -1.44
CCDC30-212ENST00000507855 SSTR3P32745 418 aaPredicted RBP6.08□□□□□ -1.44
CCDC30-212ENST00000507855 TMEM132AQ24JP5 1023 aa6.08□□□□□ -1.44
CCDC30-212ENST00000507855 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
CCDC30-212ENST00000507855 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
CCDC30-212ENST00000507855 FAM217BQ9NTX9 383 aaPredicted RBP6.07□□□□□ -1.44
CCDC30-212ENST00000507855 CERKQ8TCT0 537 aa6.07□□□□□ -1.44
CCDC30-212ENST00000507855 GPCPD1Q9NPB8 672 aa6.07□□□□□ -1.44
CCDC30-212ENST00000507855 PSDA5PKW4 1024 aaPredicted RBP6.06□□□□□ -1.44
CCDC30-212ENST00000507855 HLA-CQ95604 372 aa6.06□□□□□ -1.44
CCDC30-212ENST00000507855 BEGAINQ9BUH8 593 aa6.06□□□□□ -1.44
CCDC30-212ENST00000507855 RBM27Q9P2N5 1060 aaKnown RBP6.06□□□□□ -1.44
CCDC30-212ENST00000507855 TIMELESSQ9UNS1 1208 aa6.06□□□□□ -1.44
CCDC30-212ENST00000507855 SLC10A3P09131 477 aa6.05□□□□□ -1.44
CCDC30-212ENST00000507855 PROCA1Q8NCQ7 364 aaPredicted RBP6.05□□□□□ -1.44
CCDC30-212ENST00000507855 GTF3C3Q9Y5Q9 886 aa6.05□□□□□ -1.44
CCDC30-212ENST00000507855 OATP04181 439 aa6.05□□□□□ -1.44
CCDC30-212ENST00000507855 ANKRD13DQ6ZTN6 518 aa6.05□□□□□ -1.44
CCDC30-212ENST00000507855 DDX11L8A8MPP1 907 aa6.04□□□□□ -1.44
CCDC30-212ENST00000507855 BHMG1C9JSJ3 638 aaPredicted RBP6.04□□□□□ -1.44
CCDC30-212ENST00000507855 TMEM134Q9H6X4 195 aa6.04□□□□□ -1.44
CCDC30-212ENST00000507855 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
CCDC30-212ENST00000507855 RBM46Q8TBY0 533 aaKnown RBP6.04□□□□□ -1.44
CCDC30-212ENST00000507855 POLR3EQ9NVU0 708 aa6.04□□□□□ -1.44
CCDC30-212ENST00000507855 CLCN1P35523 988 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms