RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK1-203ENST00000507142 SLC52A1Q9NWF4 448 aa12.51□□□□□ -0.41
NEK1-203ENST00000507142 NUTM2BA6NNL0 878 aaPredicted RBP12.51□□□□□ -0.41
NEK1-203ENST00000507142 NUTM2EB1AL46 878 aaPredicted RBP12.51□□□□□ -0.41
NEK1-203ENST00000507142 NUTM2AQ8IVF1 878 aaPredicted RBP12.51□□□□□ -0.41
NEK1-203ENST00000507142 WDR7Q9Y4E6 1490 aa12.49□□□□□ -0.41
NEK1-203ENST00000507142 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
NEK1-203ENST00000507142 KIF14Q15058 1648 aa12.49□□□□□ -0.41
NEK1-203ENST00000507142 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
NEK1-203ENST00000507142 DHX57Q6P158 1386 aaKnown RBP12.49□□□□□ -0.41
NEK1-203ENST00000507142 PNNQ9H307 717 aaKnown RBP12.48□□□□□ -0.41
NEK1-203ENST00000507142 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
NEK1-203ENST00000507142 EVC2Q86UK5 1308 aa12.48□□□□□ -0.41
NEK1-203ENST00000507142 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
NEK1-203ENST00000507142 TMEM132EQ6IEE7 984 aa12.48□□□□□ -0.41
NEK1-203ENST00000507142 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
NEK1-203ENST00000507142 ZNF330Q9Y3S2 320 aaPredicted RBP12.47□□□□□ -0.41
NEK1-203ENST00000507142 NUP160Q12769 1436 aa12.47□□□□□ -0.41
NEK1-203ENST00000507142 MIA2Q96PC5 1412 aa12.46□□□□□ -0.41
NEK1-203ENST00000507142 FBXO31Q5XUX0 539 aaPredicted RBP12.46□□□□□ -0.42
NEK1-203ENST00000507142 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.42
NEK1-203ENST00000507142 ATP10BO94823 1461 aa12.45□□□□□ -0.42
NEK1-203ENST00000507142 CCDC141Q6ZP82 1450 aa12.44□□□□□ -0.42
NEK1-203ENST00000507142 HSPA2P54652 639 aa12.43□□□□□ -0.42
NEK1-203ENST00000507142 ABCC2Q92887 1545 aa12.43□□□□□ -0.42
NEK1-203ENST00000507142 COG3Q96JB2 828 aa12.43□□□□□ -0.42
NEK1-203ENST00000507142 NUTM2GQ5VZR2 741 aa12.42□□□□□ -0.42
NEK1-203ENST00000507142 MSH5O43196 834 aa12.42□□□□□ -0.42
NEK1-203ENST00000507142 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
NEK1-203ENST00000507142 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
NEK1-203ENST00000507142 PCF11O94913 1555 aaKnown RBP12.41□□□□□ -0.42
NEK1-203ENST00000507142 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
NEK1-203ENST00000507142 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.42
NEK1-203ENST00000507142 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
NEK1-203ENST00000507142 DAPK1P53355 1430 aa12.4□□□□□ -0.43
NEK1-203ENST00000507142 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.43
NEK1-203ENST00000507142 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
NEK1-203ENST00000507142 RAPGEF6Q8TEU7 1601 aa12.39□□□□□ -0.43
NEK1-203ENST00000507142 PLCH2O75038 1416 aa12.39□□□□□ -0.43
NEK1-203ENST00000507142 U2AF1L5P0DN76 240 aaPredicted RBP12.39□□□□□ -0.43
NEK1-203ENST00000507142 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
NEK1-203ENST00000507142 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
NEK1-203ENST00000507142 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
NEK1-203ENST00000507142 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
NEK1-203ENST00000507142 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
NEK1-203ENST00000507142 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
NEK1-203ENST00000507142 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
NEK1-203ENST00000507142 CAMSAP2Q08AD1 1489 aa12.38□□□□□ -0.43
NEK1-203ENST00000507142 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
NEK1-203ENST00000507142 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
NEK1-203ENST00000507142 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
NEK1-203ENST00000507142 USP35Q9P2H5 1018 aa12.37□□□□□ -0.43
NEK1-203ENST00000507142 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
NEK1-203ENST00000507142 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
NEK1-203ENST00000507142 PRAM1Q96QH2 718 aa12.37□□□□□ -0.43
NEK1-203ENST00000507142 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
NEK1-203ENST00000507142 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
NEK1-203ENST00000507142 TNRQ92752 1358 aa12.35□□□□□ -0.43
NEK1-203ENST00000507142 CABP2Q9NPB3 220 aa12.35□□□□□ -0.43
NEK1-203ENST00000507142 NLRP6P59044 892 aa12.35□□□□□ -0.43
NEK1-203ENST00000507142 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
NEK1-203ENST00000507142 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
NEK1-203ENST00000507142 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
NEK1-203ENST00000507142 TOM1O60784 492 aa12.34□□□□□ -0.43
NEK1-203ENST00000507142 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
NEK1-203ENST00000507142 DHX29Q7Z478 1369 aaKnown RBP12.34□□□□□ -0.43
NEK1-203ENST00000507142 NUP153P49790 1475 aaKnown RBP12.33□□□□□ -0.44
NEK1-203ENST00000507142 ERBINQ96RT1 1412 aa12.33□□□□□ -0.44
NEK1-203ENST00000507142 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
NEK1-203ENST00000507142 TMX4Q9H1E5 349 aaPredicted RBP12.33□□□□□ -0.44
NEK1-203ENST00000507142 NLRP2Q9NX02 1062 aa12.33□□□□□ -0.44
NEK1-203ENST00000507142 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
NEK1-203ENST00000507142 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.44
NEK1-203ENST00000507142 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
NEK1-203ENST00000507142 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
NEK1-203ENST00000507142 IDI1Q13907 227 aa12.32□□□□□ -0.44
NEK1-203ENST00000507142 ABCA5Q8WWZ7 1642 aa12.32□□□□□ -0.44
NEK1-203ENST00000507142 RPGRIP1LQ68CZ1 1315 aa12.32□□□□□ -0.44
NEK1-203ENST00000507142 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
NEK1-203ENST00000507142 HFM1A2PYH4 1435 aa12.3□□□□□ -0.44
NEK1-203ENST00000507142 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
NEK1-203ENST00000507142 AMOTL2Q9Y2J4 779 aa12.29□□□□□ -0.44
NEK1-203ENST00000507142 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
NEK1-203ENST00000507142 PANK3Q9H999 370 aa12.29□□□□□ -0.44
NEK1-203ENST00000507142 RAPGEF4Q8WZA2 1011 aa12.28□□□□□ -0.44
NEK1-203ENST00000507142 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
NEK1-203ENST00000507142 GTF2E1P29083 439 aaPredicted RBP12.28□□□□□ -0.44
NEK1-203ENST00000507142 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
NEK1-203ENST00000507142 FTSJ3Q8IY81 847 aaKnown RBP12.28□□□□□ -0.44
NEK1-203ENST00000507142 A2MP01023 1474 aa12.28□□□□□ -0.44
NEK1-203ENST00000507142 FAM135AQ9P2D6 1515 aa12.28□□□□□ -0.44
NEK1-203ENST00000507142 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
NEK1-203ENST00000507142 DISP1Q96F81 1524 aa12.27□□□□□ -0.44
NEK1-203ENST00000507142 ABCC5O15440 1437 aa12.27□□□□□ -0.44
NEK1-203ENST00000507142 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
NEK1-203ENST00000507142 CTTNBP2Q8WZ74 1663 aa12.27□□□□□ -0.45
NEK1-203ENST00000507142 CDK19Q9BWU1 502 aa12.27□□□□□ -0.45
NEK1-203ENST00000507142 CHD1O14646 1710 aa12.26□□□□□ -0.45
NEK1-203ENST00000507142 TRAPPC8Q9Y2L5 1435 aa12.26□□□□□ -0.45
NEK1-203ENST00000507142 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms