RNA–Protein interactions for RNA: ENST00000506847.5

SNX2-204, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 798 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-204ENST00000506847 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
SNX2-204ENST00000506847 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
SNX2-204ENST00000506847 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
SNX2-204ENST00000506847 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
SNX2-204ENST00000506847 CERKQ8TCT0 537 aa11.95□□□□□ -0.5
SNX2-204ENST00000506847 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
SNX2-204ENST00000506847 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNX2-204ENST00000506847 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
SNX2-204ENST00000506847 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
SNX2-204ENST00000506847 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
SNX2-204ENST00000506847 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
SNX2-204ENST00000506847 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
SNX2-204ENST00000506847 PSEN2P49810 448 aa11.9□□□□□ -0.5
SNX2-204ENST00000506847 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
SNX2-204ENST00000506847 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
SNX2-204ENST00000506847 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
SNX2-204ENST00000506847 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
SNX2-204ENST00000506847 TK2O00142 265 aa11.87□□□□□ -0.51
SNX2-204ENST00000506847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNX2-204ENST00000506847 FCHSD2O94868 740 aa11.86□□□□□ -0.51
SNX2-204ENST00000506847 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
SNX2-204ENST00000506847 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
SNX2-204ENST00000506847 COL9A1P20849 921 aa11.85□□□□□ -0.51
SNX2-204ENST00000506847 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
SNX2-204ENST00000506847 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
SNX2-204ENST00000506847 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
SNX2-204ENST00000506847 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
SNX2-204ENST00000506847 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
SNX2-204ENST00000506847 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
SNX2-204ENST00000506847 PTGDRQ13258 359 aa11.83□□□□□ -0.52
SNX2-204ENST00000506847 PRSS12P56730 875 aa11.82□□□□□ -0.52
SNX2-204ENST00000506847 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
SNX2-204ENST00000506847 HIC1Q14526 733 aa11.81□□□□□ -0.52
SNX2-204ENST00000506847 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
SNX2-204ENST00000506847 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
SNX2-204ENST00000506847 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
SNX2-204ENST00000506847 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
SNX2-204ENST00000506847 PACS2Q86VP3 889 aa11.79□□□□□ -0.52
SNX2-204ENST00000506847 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
SNX2-204ENST00000506847 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
SNX2-204ENST00000506847 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
SNX2-204ENST00000506847 PROX2Q3B8N5 592 aa11.77□□□□□ -0.53
SNX2-204ENST00000506847 GNPATO15228 680 aa11.76□□□□□ -0.53
SNX2-204ENST00000506847 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SNX2-204ENST00000506847 GPR37O15354 613 aa11.74□□□□□ -0.53
SNX2-204ENST00000506847 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
SNX2-204ENST00000506847 TTC13Q8NBP0 860 aa11.73□□□□□ -0.53
SNX2-204ENST00000506847 KIAA1468Q9P260 1216 aa11.73□□□□□ -0.53
SNX2-204ENST00000506847 HRO43593 1189 aa11.72□□□□□ -0.53
SNX2-204ENST00000506847 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
SNX2-204ENST00000506847 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
SNX2-204ENST00000506847 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
SNX2-204ENST00000506847 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
SNX2-204ENST00000506847 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
SNX2-204ENST00000506847 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
SNX2-204ENST00000506847 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
SNX2-204ENST00000506847 TATDN2Q93075 761 aa11.67□□□□□ -0.54
SNX2-204ENST00000506847 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
SNX2-204ENST00000506847 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
SNX2-204ENST00000506847 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
SNX2-204ENST00000506847 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
SNX2-204ENST00000506847 ZMYND10O75800 440 aa11.65□□□□□ -0.54
SNX2-204ENST00000506847 OATP04181 439 aa11.65□□□□□ -0.54
SNX2-204ENST00000506847 MAP2K5Q13163 448 aa11.65□□□□□ -0.54
SNX2-204ENST00000506847 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
SNX2-204ENST00000506847 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
SNX2-204ENST00000506847 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
SNX2-204ENST00000506847 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
SNX2-204ENST00000506847 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
SNX2-204ENST00000506847 FECHP22830 423 aa11.62□□□□□ -0.55
SNX2-204ENST00000506847 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
SNX2-204ENST00000506847 KRI1Q8N9T8 703 aaKnown RBP11.61□□□□□ -0.55
SNX2-204ENST00000506847 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
SNX2-204ENST00000506847 SMAPO00193 183 aa11.59□□□□□ -0.55
SNX2-204ENST00000506847 IRF6O14896 467 aa11.59□□□□□ -0.55
SNX2-204ENST00000506847 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
SNX2-204ENST00000506847 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
SNX2-204ENST00000506847 EYA1Q99502 592 aa11.59□□□□□ -0.55
SNX2-204ENST00000506847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
SNX2-204ENST00000506847 DNAJB2P25686 324 aa11.57□□□□□ -0.56
SNX2-204ENST00000506847 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
SNX2-204ENST00000506847 METTL3Q86U44 580 aaKnown RBP11.57□□□□□ -0.56
SNX2-204ENST00000506847 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
SNX2-204ENST00000506847 WNT2BQ93097 391 aa11.57□□□□□ -0.56
SNX2-204ENST00000506847 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
SNX2-204ENST00000506847 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
SNX2-204ENST00000506847 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
SNX2-204ENST00000506847 FAM161AQ3B820 660 aa11.55□□□□□ -0.56
SNX2-204ENST00000506847 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
SNX2-204ENST00000506847 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
SNX2-204ENST00000506847 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
SNX2-204ENST00000506847 RCCD1A6NED2 376 aa11.53□□□□□ -0.56
SNX2-204ENST00000506847 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
SNX2-204ENST00000506847 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
SNX2-204ENST00000506847 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
SNX2-204ENST00000506847 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
SNX2-204ENST00000506847 THSD4Q6ZMP0 1018 aa11.5□□□□□ -0.57
SNX2-204ENST00000506847 SAMD7Q7Z3H4 446 aa11.5□□□□□ -0.57
SNX2-204ENST00000506847 SLF2Q8IX21 1173 aa11.5□□□□□ -0.57
SNX2-204ENST00000506847 AK7Q96M32 723 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms