RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
AP001960.1-201ENST00000506494 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
AP001960.1-201ENST00000506494 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
AP001960.1-201ENST00000506494 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
AP001960.1-201ENST00000506494 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
AP001960.1-201ENST00000506494 PHF14O94880 888 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 CDHR5Q9HBB8 845 aa11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
AP001960.1-201ENST00000506494 A6NJR5 290 aa11.36□□□□□ -0.59
AP001960.1-201ENST00000506494 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
AP001960.1-201ENST00000506494 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
AP001960.1-201ENST00000506494 SLC34A2O95436 690 aa11.35□□□□□ -0.59
AP001960.1-201ENST00000506494 NPDC1Q9NQX5 325 aaPredicted RBP11.35□□□□□ -0.59
AP001960.1-201ENST00000506494 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
AP001960.1-201ENST00000506494 TRAK2O60296 914 aa11.31□□□□□ -0.6
AP001960.1-201ENST00000506494 MCM6Q14566 821 aa11.31□□□□□ -0.6
AP001960.1-201ENST00000506494 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
AP001960.1-201ENST00000506494 OATP04181 439 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 C7P10643 843 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 PCDHGA10Q9Y5H3 936 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
AP001960.1-201ENST00000506494 RAD21O60216 631 aa11.28□□□□□ -0.6
AP001960.1-201ENST00000506494 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
AP001960.1-201ENST00000506494 CERKQ8TCT0 537 aa11.27□□□□□ -0.61
AP001960.1-201ENST00000506494 PHOX2BQ99453 314 aa11.27□□□□□ -0.61
AP001960.1-201ENST00000506494 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
AP001960.1-201ENST00000506494 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
AP001960.1-201ENST00000506494 FAM217BQ9NTX9 383 aaPredicted RBP11.26□□□□□ -0.61
AP001960.1-201ENST00000506494 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
AP001960.1-201ENST00000506494 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
AP001960.1-201ENST00000506494 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
AP001960.1-201ENST00000506494 PCDHGA4Q9Y5G9 962 aa11.24□□□□□ -0.61
AP001960.1-201ENST00000506494 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
AP001960.1-201ENST00000506494 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
AP001960.1-201ENST00000506494 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
AP001960.1-201ENST00000506494 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
AP001960.1-201ENST00000506494 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
AP001960.1-201ENST00000506494 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
AP001960.1-201ENST00000506494 CLK2P49760 499 aaKnown RBP11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 ADGRG1Q9Y653 693 aa11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 RANGAP1P46060 587 aaPredicted RBP11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
AP001960.1-201ENST00000506494 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
AP001960.1-201ENST00000506494 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
AP001960.1-201ENST00000506494 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
AP001960.1-201ENST00000506494 FOSBP53539 338 aa11.17□□□□□ -0.62
AP001960.1-201ENST00000506494 HRCP23327 699 aa11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 ZBTB7CA1YPR0 619 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 POM121Q96HA1 1249 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
AP001960.1-201ENST00000506494 RFC5P40937 340 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 PRSS12P56730 875 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 TMEM259Q4ZIN3 620 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
AP001960.1-201ENST00000506494 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
AP001960.1-201ENST00000506494 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
AP001960.1-201ENST00000506494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
AP001960.1-201ENST00000506494 WWC1Q8IX03 1113 aa11.09□□□□□ -0.63
AP001960.1-201ENST00000506494 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
AP001960.1-201ENST00000506494 SNRKQ9NRH2 765 aa11.08□□□□□ -0.64
AP001960.1-201ENST00000506494 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
AP001960.1-201ENST00000506494 RIC3Q7Z5B4 369 aa11.07□□□□□ -0.64
AP001960.1-201ENST00000506494 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
AP001960.1-201ENST00000506494 NUDT7P0C024 238 aa11.06□□□□□ -0.64
AP001960.1-201ENST00000506494 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
AP001960.1-201ENST00000506494 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
AP001960.1-201ENST00000506494 PRM3Q9NNZ6 103 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms