RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
AP001960.1-201ENST00000506494 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
AP001960.1-201ENST00000506494 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
AP001960.1-201ENST00000506494 EN1Q05925 392 aaPredicted RBP11.4□□□□□ -0.58
AP001960.1-201ENST00000506494 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
AP001960.1-201ENST00000506494 PHF14O94880 888 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
AP001960.1-201ENST00000506494 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 CDHR5Q9HBB8 845 aa11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
AP001960.1-201ENST00000506494 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
AP001960.1-201ENST00000506494 A6NJR5 290 aa11.36□□□□□ -0.59
AP001960.1-201ENST00000506494 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
AP001960.1-201ENST00000506494 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
AP001960.1-201ENST00000506494 SLC34A2O95436 690 aa11.35□□□□□ -0.59
AP001960.1-201ENST00000506494 NPDC1Q9NQX5 325 aaPredicted RBP11.35□□□□□ -0.59
AP001960.1-201ENST00000506494 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
AP001960.1-201ENST00000506494 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
AP001960.1-201ENST00000506494 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
AP001960.1-201ENST00000506494 TRAK2O60296 914 aa11.31□□□□□ -0.6
AP001960.1-201ENST00000506494 MCM6Q14566 821 aa11.31□□□□□ -0.6
AP001960.1-201ENST00000506494 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
AP001960.1-201ENST00000506494 OATP04181 439 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 C7P10643 843 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 PCDHGA10Q9Y5H3 936 aa11.3□□□□□ -0.6
AP001960.1-201ENST00000506494 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
AP001960.1-201ENST00000506494 RAD21O60216 631 aa11.28□□□□□ -0.6
AP001960.1-201ENST00000506494 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
AP001960.1-201ENST00000506494 CERKQ8TCT0 537 aa11.27□□□□□ -0.61
AP001960.1-201ENST00000506494 PHOX2BQ99453 314 aa11.27□□□□□ -0.61
AP001960.1-201ENST00000506494 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
AP001960.1-201ENST00000506494 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
AP001960.1-201ENST00000506494 FAM217BQ9NTX9 383 aaPredicted RBP11.26□□□□□ -0.61
AP001960.1-201ENST00000506494 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
AP001960.1-201ENST00000506494 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
AP001960.1-201ENST00000506494 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
AP001960.1-201ENST00000506494 PCDHGA4Q9Y5G9 962 aa11.24□□□□□ -0.61
AP001960.1-201ENST00000506494 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
AP001960.1-201ENST00000506494 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
AP001960.1-201ENST00000506494 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
AP001960.1-201ENST00000506494 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
AP001960.1-201ENST00000506494 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
AP001960.1-201ENST00000506494 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
AP001960.1-201ENST00000506494 CLK2P49760 499 aaKnown RBP11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 ADGRG1Q9Y653 693 aa11.2□□□□□ -0.62
AP001960.1-201ENST00000506494 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 RANGAP1P46060 587 aaPredicted RBP11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
AP001960.1-201ENST00000506494 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
AP001960.1-201ENST00000506494 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
AP001960.1-201ENST00000506494 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
AP001960.1-201ENST00000506494 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
AP001960.1-201ENST00000506494 FOSBP53539 338 aa11.17□□□□□ -0.62
AP001960.1-201ENST00000506494 HRCP23327 699 aa11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
AP001960.1-201ENST00000506494 ZBTB7CA1YPR0 619 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 POM121Q96HA1 1249 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
AP001960.1-201ENST00000506494 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
AP001960.1-201ENST00000506494 RFC5P40937 340 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 PRSS12P56730 875 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 TMEM259Q4ZIN3 620 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
AP001960.1-201ENST00000506494 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
AP001960.1-201ENST00000506494 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
AP001960.1-201ENST00000506494 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
AP001960.1-201ENST00000506494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
AP001960.1-201ENST00000506494 WWC1Q8IX03 1113 aa11.09□□□□□ -0.63
AP001960.1-201ENST00000506494 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
AP001960.1-201ENST00000506494 SNRKQ9NRH2 765 aa11.08□□□□□ -0.64
AP001960.1-201ENST00000506494 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
AP001960.1-201ENST00000506494 RIC3Q7Z5B4 369 aa11.07□□□□□ -0.64
AP001960.1-201ENST00000506494 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
AP001960.1-201ENST00000506494 NUDT7P0C024 238 aa11.06□□□□□ -0.64
AP001960.1-201ENST00000506494 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
AP001960.1-201ENST00000506494 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
AP001960.1-201ENST00000506494 PRM3Q9NNZ6 103 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms