RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
PDLIM1P4-201ENST00000504327 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
PDLIM1P4-201ENST00000504327 MLLT3P42568 568 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1P4-201ENST00000504327 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
PDLIM1P4-201ENST00000504327 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
PDLIM1P4-201ENST00000504327 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1P4-201ENST00000504327 SEMA3EO15041 775 aa9.34□□□□□ -0.91
PDLIM1P4-201ENST00000504327 MAP3K7O43318 606 aa9.33□□□□□ -0.92
PDLIM1P4-201ENST00000504327 COL9A1P20849 921 aa9.33□□□□□ -0.92
PDLIM1P4-201ENST00000504327 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
PDLIM1P4-201ENST00000504327 OSBPP22059 807 aa9.32□□□□□ -0.92
PDLIM1P4-201ENST00000504327 C6orf132Q5T0Z8 1188 aa9.32□□□□□ -0.92
PDLIM1P4-201ENST00000504327 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
PDLIM1P4-201ENST00000504327 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
PDLIM1P4-201ENST00000504327 ZBED2Q9BTP6 218 aa9.3□□□□□ -0.92
PDLIM1P4-201ENST00000504327 TK2O00142 265 aa9.29□□□□□ -0.92
PDLIM1P4-201ENST00000504327 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
PDLIM1P4-201ENST00000504327 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
PDLIM1P4-201ENST00000504327 PROX2Q3B8N5 592 aa9.28□□□□□ -0.92
PDLIM1P4-201ENST00000504327 VPS9D1Q9Y2B5 631 aa9.28□□□□□ -0.92
PDLIM1P4-201ENST00000504327 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1P4-201ENST00000504327 HRO43593 1189 aa9.26□□□□□ -0.93
PDLIM1P4-201ENST00000504327 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
PDLIM1P4-201ENST00000504327 MYT1LQ9UL68 1186 aa9.25□□□□□ -0.93
PDLIM1P4-201ENST00000504327 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1P4-201ENST00000504327 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
PDLIM1P4-201ENST00000504327 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1P4-201ENST00000504327 RBM26Q5T8P6 1007 aaKnown RBP9.19□□□□□ -0.94
PDLIM1P4-201ENST00000504327 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1P4-201ENST00000504327 RABGEF1Q9UJ41 708 aa9.19□□□□□ -0.94
PDLIM1P4-201ENST00000504327 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
PDLIM1P4-201ENST00000504327 NUTM2FA1L443 756 aa9.18□□□□□ -0.94
PDLIM1P4-201ENST00000504327 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
PDLIM1P4-201ENST00000504327 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
PDLIM1P4-201ENST00000504327 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
PDLIM1P4-201ENST00000504327 STAC3Q96MF2 364 aa9.18□□□□□ -0.94
PDLIM1P4-201ENST00000504327 KIAA1468Q9P260 1216 aa9.18□□□□□ -0.94
PDLIM1P4-201ENST00000504327 PRSS12P56730 875 aa9.17□□□□□ -0.94
PDLIM1P4-201ENST00000504327 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
PDLIM1P4-201ENST00000504327 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
PDLIM1P4-201ENST00000504327 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
PDLIM1P4-201ENST00000504327 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1P4-201ENST00000504327 ONECUT3O60422 494 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1P4-201ENST00000504327 PTGDRQ13258 359 aa9.15□□□□□ -0.94
PDLIM1P4-201ENST00000504327 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
PDLIM1P4-201ENST00000504327 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
PDLIM1P4-201ENST00000504327 KCTD12Q96CX2 325 aaKnown RBP9.14□□□□□ -0.95
PDLIM1P4-201ENST00000504327 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
PDLIM1P4-201ENST00000504327 SMAPO00193 183 aa9.12□□□□□ -0.95
PDLIM1P4-201ENST00000504327 PACS2Q86VP3 889 aa9.12□□□□□ -0.95
PDLIM1P4-201ENST00000504327 GOLGA8CPA6NN73 597 aa9.11□□□□□ -0.95
PDLIM1P4-201ENST00000504327 GPR37O15354 613 aa9.11□□□□□ -0.95
PDLIM1P4-201ENST00000504327 TTC13Q8NBP0 860 aa9.11□□□□□ -0.95
PDLIM1P4-201ENST00000504327 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
PDLIM1P4-201ENST00000504327 FCHSD2O94868 740 aa9.1□□□□□ -0.95
PDLIM1P4-201ENST00000504327 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
PDLIM1P4-201ENST00000504327 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
PDLIM1P4-201ENST00000504327 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
PDLIM1P4-201ENST00000504327 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
PDLIM1P4-201ENST00000504327 WNT2BQ93097 391 aa9.09□□□□□ -0.95
PDLIM1P4-201ENST00000504327 FAM98CQ17RN3 349 aaKnown RBP9.08□□□□□ -0.96
PDLIM1P4-201ENST00000504327 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
PDLIM1P4-201ENST00000504327 TATDN2Q93075 761 aa9.08□□□□□ -0.96
PDLIM1P4-201ENST00000504327 HIC1Q14526 733 aa9.07□□□□□ -0.96
PDLIM1P4-201ENST00000504327 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
PDLIM1P4-201ENST00000504327 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
PDLIM1P4-201ENST00000504327 THSD4Q6ZMP0 1018 aa9.06□□□□□ -0.96
PDLIM1P4-201ENST00000504327 ANKK1Q8NFD2 765 aa9.06□□□□□ -0.96
PDLIM1P4-201ENST00000504327 FECHP22830 423 aa9.05□□□□□ -0.96
PDLIM1P4-201ENST00000504327 BCAMP50895 628 aa9.05□□□□□ -0.96
PDLIM1P4-201ENST00000504327 GNPATO15228 680 aa9.04□□□□□ -0.96
PDLIM1P4-201ENST00000504327 PTPN5P54829 565 aa9.04□□□□□ -0.96
PDLIM1P4-201ENST00000504327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDLIM1P4-201ENST00000504327 LMOD2Q6P5Q4 547 aa9.03□□□□□ -0.96
PDLIM1P4-201ENST00000504327 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
PDLIM1P4-201ENST00000504327 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
PDLIM1P4-201ENST00000504327 SOWAHBA6NEL2 793 aa9.01□□□□□ -0.97
PDLIM1P4-201ENST00000504327 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
PDLIM1P4-201ENST00000504327 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
PDLIM1P4-201ENST00000504327 EYA1Q99502 592 aa9.01□□□□□ -0.97
PDLIM1P4-201ENST00000504327 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
PDLIM1P4-201ENST00000504327 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
PDLIM1P4-201ENST00000504327 RNF40O75150 1001 aa8.97□□□□□ -0.97
PDLIM1P4-201ENST00000504327 SWT1Q5T5J6 900 aaKnown RBP8.97□□□□□ -0.97
PDLIM1P4-201ENST00000504327 HPS5Q9UPZ3 1129 aa8.97□□□□□ -0.97
PDLIM1P4-201ENST00000504327 DNAJB2P25686 324 aa8.96□□□□□ -0.98
PDLIM1P4-201ENST00000504327 PXYLP1Q8TE99 480 aa8.96□□□□□ -0.98
PDLIM1P4-201ENST00000504327 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
PDLIM1P4-201ENST00000504327 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
PDLIM1P4-201ENST00000504327 METTL3Q86U44 580 aaKnown RBP8.95□□□□□ -0.98
PDLIM1P4-201ENST00000504327 BCANQ96GW7 911 aa8.94□□□□□ -0.98
PDLIM1P4-201ENST00000504327 TSR3Q9UJK0 312 aaKnown RBP8.94□□□□□ -0.98
PDLIM1P4-201ENST00000504327 OATP04181 439 aa8.93□□□□□ -0.98
PDLIM1P4-201ENST00000504327 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
PDLIM1P4-201ENST00000504327 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
PDLIM1P4-201ENST00000504327 NLRP7Q8WX94 980 aa8.93□□□□□ -0.98
PDLIM1P4-201ENST00000504327 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
PDLIM1P4-201ENST00000504327 ZC3H15Q8WU90 426 aaKnown RBP8.92□□□□□ -0.98
PDLIM1P4-201ENST00000504327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.91□□□□□ -0.98
PDLIM1P4-201ENST00000504327 PPP4CP60510 307 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms