RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 HRO43593 1189 aa5.03□□□□□ -1.6
PCAT4-201ENST00000504263 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
PCAT4-201ENST00000504263 DEKP35659 375 aaKnown RBP5.02□□□□□ -1.61
PCAT4-201ENST00000504263 ZNF467Q7Z7K2 595 aaPredicted RBP5.02□□□□□ -1.61
PCAT4-201ENST00000504263 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
PCAT4-201ENST00000504263 YTHDC1Q96MU7 727 aaKnown RBP5.02□□□□□ -1.61
PCAT4-201ENST00000504263 SALL2Q9Y467 1007 aaPredicted RBP5.02□□□□□ -1.61
PCAT4-201ENST00000504263 TOPBP1Q92547 1522 aa5.02□□□□□ -1.61
PCAT4-201ENST00000504263 PSEN1P49768 467 aa5.01□□□□□ -1.61
PCAT4-201ENST00000504263 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
PCAT4-201ENST00000504263 IFT140Q96RY7 1462 aa5.01□□□□□ -1.61
PCAT4-201ENST00000504263 DNMBPQ6XZF7 1577 aa5□□□□□ -1.61
PCAT4-201ENST00000504263 TK2O00142 265 aa5□□□□□ -1.61
PCAT4-201ENST00000504263 WIPF1O43516 503 aa5□□□□□ -1.61
PCAT4-201ENST00000504263 PTPN5P54829 565 aa4.99□□□□□ -1.61
PCAT4-201ENST00000504263 ZNF608Q9ULD9 1512 aaPredicted RBP4.98□□□□□ -1.61
PCAT4-201ENST00000504263 ARHGAP33O14559 1287 aa4.98□□□□□ -1.61
PCAT4-201ENST00000504263 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
PCAT4-201ENST00000504263 SOGA1O94964 1423 aa4.98□□□□□ -1.61
PCAT4-201ENST00000504263 POLA1P09884 1462 aaPredicted RBP4.97□□□□□ -1.61
PCAT4-201ENST00000504263 AQRO60306 1485 aaKnown RBP eCLIP4.97□□□□□ -1.61
PCAT4-201ENST00000504263 PODXL2Q9NZ53 605 aa4.96□□□□□ -1.61
PCAT4-201ENST00000504263 TARBP1Q13395 1621 aaKnown RBP4.96□□□□□ -1.62
PCAT4-201ENST00000504263 EIF4G3O43432 1585 aaKnown RBP4.95□□□□□ -1.62
PCAT4-201ENST00000504263 LHX6Q9UPM6 363 aa4.95□□□□□ -1.62
PCAT4-201ENST00000504263 TDRD9Q8NDG6 1382 aaKnown RBP4.95□□□□□ -1.62
PCAT4-201ENST00000504263 RAD54L2Q9Y4B4 1467 aa4.95□□□□□ -1.62
PCAT4-201ENST00000504263 C11orf95C9JLR9 678 aaPredicted RBP4.95□□□□□ -1.62
PCAT4-201ENST00000504263 FGD5Q6ZNL6 1462 aa4.94□□□□□ -1.62
PCAT4-201ENST00000504263 WRNQ14191 1432 aaPredicted RBP eCLIP4.94□□□□□ -1.62
PCAT4-201ENST00000504263 CUX1P39880 1505 aa4.94□□□□□ -1.62
PCAT4-201ENST00000504263 AMER1Q5JTC6 1135 aaPredicted RBP4.94□□□□□ -1.62
PCAT4-201ENST00000504263 MICALL2Q8IY33 904 aa4.94□□□□□ -1.62
PCAT4-201ENST00000504263 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
PCAT4-201ENST00000504263 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
PCAT4-201ENST00000504263 CABP2Q9NPB3 220 aa4.94□□□□□ -1.62
PCAT4-201ENST00000504263 NUDT7P0C024 238 aa4.93□□□□□ -1.62
PCAT4-201ENST00000504263 DMRTA1Q5VZB9 504 aa4.93□□□□□ -1.62
PCAT4-201ENST00000504263 CHMP7Q8WUX9 453 aaPredicted RBP4.93□□□□□ -1.62
PCAT4-201ENST00000504263 STAC3Q96MF2 364 aa4.93□□□□□ -1.62
PCAT4-201ENST00000504263 GLIPR1L2Q4G1C9 344 aa4.93□□□□□ -1.62
PCAT4-201ENST00000504263 WDR97A6NE52 1622 aa4.93□□□□□ -1.62
PCAT4-201ENST00000504263 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
PCAT4-201ENST00000504263 CHD1O14646 1710 aa4.92□□□□□ -1.62
PCAT4-201ENST00000504263 NEFLP07196 543 aa4.92□□□□□ -1.62
PCAT4-201ENST00000504263 CCDC136Q96JN2 1154 aa4.92□□□□□ -1.62
PCAT4-201ENST00000504263 GRIN2BQ13224 1484 aa4.91□□□□□ -1.62
PCAT4-201ENST00000504263 WFS1O76024 890 aa4.91□□□□□ -1.62
PCAT4-201ENST00000504263 PDAP1Q13442 181 aaKnown RBP4.91□□□□□ -1.62
PCAT4-201ENST00000504263 CHRM1P11229 460 aaPredicted RBP4.9□□□□□ -1.62
PCAT4-201ENST00000504263 GAPVD1Q14C86 1478 aa4.9□□□□□ -1.62
PCAT4-201ENST00000504263 MAGI1Q96QZ7 1491 aaPredicted RBP4.9□□□□□ -1.62
PCAT4-201ENST00000504263 ABCA10Q8WWZ4 1543 aa4.9□□□□□ -1.62
PCAT4-201ENST00000504263 RIMBP3CA6NJZ7 1639 aa4.9□□□□□ -1.63
PCAT4-201ENST00000504263 RIMBP3BA6NNM3 1639 aa4.9□□□□□ -1.63
PCAT4-201ENST00000504263 RIMBP3Q9UFD9 1639 aa4.9□□□□□ -1.63
PCAT4-201ENST00000504263 CYB5RLQ6IPT4 315 aa4.9□□□□□ -1.63
PCAT4-201ENST00000504263 RSPH6AQ9H0K4 717 aa4.9□□□□□ -1.63
PCAT4-201ENST00000504263 SNAPC4Q5SXM2 1469 aa4.9□□□□□ -1.63
PCAT4-201ENST00000504263 TOP2BQ02880 1626 aa4.89□□□□□ -1.63
PCAT4-201ENST00000504263 ARHGEF11O15085 1522 aa4.89□□□□□ -1.63
PCAT4-201ENST00000504263 SYNJ2O15056 1496 aa4.89□□□□□ -1.63
PCAT4-201ENST00000504263 PSEN2P49810 448 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 FKBP8Q14318 412 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 RTN4Q9NQC3 1192 aaKnown RBP4.88□□□□□ -1.63
PCAT4-201ENST00000504263 WASHC2AQ641Q2 1341 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 BIVM-ERCC5R4GMW8 1640 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 PBRM1Q86U86 1689 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 SYNJ1O43426 1573 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 THSD4Q6ZMP0 1018 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 USP35Q9P2H5 1018 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 CDK11AQ9UQ88 783 aaPredicted RBP4.88□□□□□ -1.63
PCAT4-201ENST00000504263 WASHC2CQ9Y4E1 1318 aa4.88□□□□□ -1.63
PCAT4-201ENST00000504263 ABCA5Q8WWZ7 1642 aa4.87□□□□□ -1.63
PCAT4-201ENST00000504263 NOP58Q9Y2X3 529 aaKnown RBP4.87□□□□□ -1.63
PCAT4-201ENST00000504263 IL27Q8NEV9 243 aa4.86□□□□□ -1.63
PCAT4-201ENST00000504263 ITGBL1O95965 494 aaPredicted RBP4.85□□□□□ -1.63
PCAT4-201ENST00000504263 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.85□□□□□ -1.63
PCAT4-201ENST00000504263 CLASP1Q7Z460 1538 aa4.85□□□□□ -1.63
PCAT4-201ENST00000504263 RTL5Q5HYW3 569 aaPredicted RBP4.85□□□□□ -1.63
PCAT4-201ENST00000504263 ERICH3Q5RHP9 1530 aa4.84□□□□□ -1.63
PCAT4-201ENST00000504263 FHAD1B1AJZ9 1412 aa4.84□□□□□ -1.63
PCAT4-201ENST00000504263 PSDA5PKW4 1024 aaPredicted RBP4.84□□□□□ -1.63
PCAT4-201ENST00000504263 ZMYND15Q9H091 742 aa4.84□□□□□ -1.63
PCAT4-201ENST00000504263 PCDHGA4Q9Y5G9 962 aa4.84□□□□□ -1.63
PCAT4-201ENST00000504263 GRIN2AQ12879 1464 aa4.84□□□□□ -1.63
PCAT4-201ENST00000504263 ARAP1Q96P48 1450 aa4.84□□□□□ -1.63
PCAT4-201ENST00000504263 ADAMTS12P58397 1594 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 GSE1Q14687 1217 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 BCANQ96GW7 911 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 FGD1P98174 961 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 JPH4Q96JJ6 628 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 NUP160Q12769 1436 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 KIF27Q86VH2 1401 aa4.82□□□□□ -1.64
PCAT4-201ENST00000504263 EFCAB3Q8N7B9 438 aa4.81□□□□□ -1.64
PCAT4-201ENST00000504263 VPS9D1Q9Y2B5 631 aa4.81□□□□□ -1.64
PCAT4-201ENST00000504263 IGF1RP08069 1367 aa4.81□□□□□ -1.64
PCAT4-201ENST00000504263 CCER2I3L3R5 266 aa4.81□□□□□ -1.64
PCAT4-201ENST00000504263 CEP170Q5SW79 1584 aa4.81□□□□□ -1.64
PCAT4-201ENST00000504263 FAM43AQ8N2R8 423 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms