RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
SPCS3-201ENST00000503362 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
SPCS3-201ENST00000503362 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
SPCS3-201ENST00000503362 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
SPCS3-201ENST00000503362 ANP32BQ92688 251 aaKnown RBP17.04■□□□□ 0.32
SPCS3-201ENST00000503362 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
SPCS3-201ENST00000503362 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
SPCS3-201ENST00000503362 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPCS3-201ENST00000503362 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
SPCS3-201ENST00000503362 EIF3AQ14152 1382 aaKnown RBP17.04■□□□□ 0.32
SPCS3-201ENST00000503362 STK26Q9P289 416 aa17.03■□□□□ 0.32
SPCS3-201ENST00000503362 ABCC5O15440 1437 aa17.03■□□□□ 0.32
SPCS3-201ENST00000503362 APAF1O14727 1248 aa17.02■□□□□ 0.32
SPCS3-201ENST00000503362 SLC4A3P48751 1232 aa17.02■□□□□ 0.31
SPCS3-201ENST00000503362 IQGAP2Q13576 1575 aa17.02■□□□□ 0.31
SPCS3-201ENST00000503362 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
SPCS3-201ENST00000503362 C9orf84Q5VXU9 1444 aa17.01■□□□□ 0.31
SPCS3-201ENST00000503362 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
SPCS3-201ENST00000503362 NCOA1Q15788 1441 aa17■□□□□ 0.31
SPCS3-201ENST00000503362 MSH5O43196 834 aa17■□□□□ 0.31
SPCS3-201ENST00000503362 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
SPCS3-201ENST00000503362 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
SPCS3-201ENST00000503362 SPRYD3Q8NCJ5 442 aa16.99■□□□□ 0.31
SPCS3-201ENST00000503362 MS4A1P11836 297 aa16.99■□□□□ 0.31
SPCS3-201ENST00000503362 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
SPCS3-201ENST00000503362 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
SPCS3-201ENST00000503362 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
SPCS3-201ENST00000503362 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
SPCS3-201ENST00000503362 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
SPCS3-201ENST00000503362 SLKQ9H2G2 1235 aaPredicted RBP16.98■□□□□ 0.31
SPCS3-201ENST00000503362 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
SPCS3-201ENST00000503362 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
SPCS3-201ENST00000503362 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
SPCS3-201ENST00000503362 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
SPCS3-201ENST00000503362 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
SPCS3-201ENST00000503362 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
SPCS3-201ENST00000503362 BCL2L13Q9BXK5 485 aa16.95■□□□□ 0.3
SPCS3-201ENST00000503362 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
SPCS3-201ENST00000503362 RWDD1Q9H446 243 aaPredicted RBP16.93■□□□□ 0.3
SPCS3-201ENST00000503362 E9PSI1 815 aa16.92■□□□□ 0.3
SPCS3-201ENST00000503362 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
SPCS3-201ENST00000503362 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
SPCS3-201ENST00000503362 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
SPCS3-201ENST00000503362 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
SPCS3-201ENST00000503362 ITPRIPQ8IWB1 547 aa16.91■□□□□ 0.3
SPCS3-201ENST00000503362 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
SPCS3-201ENST00000503362 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
SPCS3-201ENST00000503362 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
SPCS3-201ENST00000503362 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
SPCS3-201ENST00000503362 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
SPCS3-201ENST00000503362 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
SPCS3-201ENST00000503362 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.3
SPCS3-201ENST00000503362 USP35Q9P2H5 1018 aa16.89■□□□□ 0.3
SPCS3-201ENST00000503362 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
SPCS3-201ENST00000503362 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
SPCS3-201ENST00000503362 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
SPCS3-201ENST00000503362 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
SPCS3-201ENST00000503362 HSP90AB1P08238 724 aaKnown RBP16.87■□□□□ 0.29
SPCS3-201ENST00000503362 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
SPCS3-201ENST00000503362 TRIM44Q96DX7 344 aaPredicted RBP16.86■□□□□ 0.29
SPCS3-201ENST00000503362 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
SPCS3-201ENST00000503362 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
SPCS3-201ENST00000503362 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
SPCS3-201ENST00000503362 NCLP19338 710 aaKnown RBP16.85■□□□□ 0.29
SPCS3-201ENST00000503362 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
SPCS3-201ENST00000503362 MLECQ14165 292 aa16.85■□□□□ 0.29
SPCS3-201ENST00000503362 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
SPCS3-201ENST00000503362 CHMP4BQ9H444 224 aaKnown RBP16.84■□□□□ 0.29
SPCS3-201ENST00000503362 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
SPCS3-201ENST00000503362 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
SPCS3-201ENST00000503362 CTTNBP2Q8WZ74 1663 aa16.83■□□□□ 0.29
SPCS3-201ENST00000503362 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
SPCS3-201ENST00000503362 SOX12O15370 315 aa16.82■□□□□ 0.28
SPCS3-201ENST00000503362 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
SPCS3-201ENST00000503362 GZF1Q9H116 711 aaPredicted RBP16.82■□□□□ 0.28
SPCS3-201ENST00000503362 C14orf37Q86TY3 774 aa16.81■□□□□ 0.28
SPCS3-201ENST00000503362 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
SPCS3-201ENST00000503362 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
SPCS3-201ENST00000503362 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
SPCS3-201ENST00000503362 PANK1Q8TE04 598 aa16.8■□□□□ 0.28
SPCS3-201ENST00000503362 ERBINQ96RT1 1412 aa16.8■□□□□ 0.28
SPCS3-201ENST00000503362 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
SPCS3-201ENST00000503362 GSE1Q14687 1217 aa16.79■□□□□ 0.28
SPCS3-201ENST00000503362 ZBTB7CA1YPR0 619 aa16.78■□□□□ 0.28
SPCS3-201ENST00000503362 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
SPCS3-201ENST00000503362 SKAP1Q86WV1 359 aa16.78■□□□□ 0.28
SPCS3-201ENST00000503362 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
SPCS3-201ENST00000503362 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
SPCS3-201ENST00000503362 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
SPCS3-201ENST00000503362 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
SPCS3-201ENST00000503362 APBB1O00213 710 aa16.77■□□□□ 0.27
SPCS3-201ENST00000503362 L1TD1Q5T7N2 865 aaKnown RBP16.77■□□□□ 0.27
SPCS3-201ENST00000503362 BCAR3O75815 825 aa16.76■□□□□ 0.27
SPCS3-201ENST00000503362 ZKSCAN2Q63HK3 967 aa16.76■□□□□ 0.27
SPCS3-201ENST00000503362 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
SPCS3-201ENST00000503362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPCS3-201ENST00000503362 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
SPCS3-201ENST00000503362 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
SPCS3-201ENST00000503362 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
SPCS3-201ENST00000503362 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms