RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CLCN1P35523 988 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 SLAIN1Q8ND83 568 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
HMGB1P3-201ENST00000502802 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
HMGB1P3-201ENST00000502802 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
HMGB1P3-201ENST00000502802 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
HMGB1P3-201ENST00000502802 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P3-201ENST00000502802 FBXW7Q969H0 707 aa10.02□□□□□ -0.81
HMGB1P3-201ENST00000502802 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
HMGB1P3-201ENST00000502802 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
HMGB1P3-201ENST00000502802 PHOX2BQ99453 314 aa10.01□□□□□ -0.81
HMGB1P3-201ENST00000502802 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
HMGB1P3-201ENST00000502802 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
HMGB1P3-201ENST00000502802 JPH4Q96JJ6 628 aa10□□□□□ -0.81
HMGB1P3-201ENST00000502802 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
HMGB1P3-201ENST00000502802 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
HMGB1P3-201ENST00000502802 OATP04181 439 aa9.98□□□□□ -0.81
HMGB1P3-201ENST00000502802 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
HMGB1P3-201ENST00000502802 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
HMGB1P3-201ENST00000502802 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.82
HMGB1P3-201ENST00000502802 FOSBP53539 338 aa9.96□□□□□ -0.82
HMGB1P3-201ENST00000502802 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
HMGB1P3-201ENST00000502802 FAM161AQ3B820 660 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 C6orf132Q5T0Z8 1188 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 PADI6Q6TGC4 694 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
HMGB1P3-201ENST00000502802 A6NJR5 290 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 APBB1O00213 710 aa9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 ARID3AQ99856 593 aa9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
HMGB1P3-201ENST00000502802 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
HMGB1P3-201ENST00000502802 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P3-201ENST00000502802 MCM6Q14566 821 aa9.9□□□□□ -0.82
HMGB1P3-201ENST00000502802 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
HMGB1P3-201ENST00000502802 CLUAP1Q96AJ1 413 aa9.9□□□□□ -0.82
HMGB1P3-201ENST00000502802 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P3-201ENST00000502802 TRAK2O60296 914 aa9.88□□□□□ -0.83
HMGB1P3-201ENST00000502802 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
HMGB1P3-201ENST00000502802 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
HMGB1P3-201ENST00000502802 NUDT7P0C024 238 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 PRSS12P56730 875 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGB1P3-201ENST00000502802 DIXDC1Q155Q3 683 aa9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 KHSRPQ92945 711 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 TBC1D2Q9BYX2 928 aa9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
HMGB1P3-201ENST00000502802 HOXB3P14651 431 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P3-201ENST00000502802 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
HMGB1P3-201ENST00000502802 SPDYE5A6NIY4 337 aa9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 RAD21O60216 631 aa9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 POTEHQ6S545 545 aa9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 RCCD1A6NED2 376 aa9.79□□□□□ -0.84
HMGB1P3-201ENST00000502802 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
HMGB1P3-201ENST00000502802 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
HMGB1P3-201ENST00000502802 RFC5P40937 340 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 EYA1Q99502 592 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 LHX6Q9UPM6 363 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 COL9A1P20849 921 aa9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 CD46P15529 392 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 PPP2R2DQ66LE6 453 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 BCL2L12Q9HB09 334 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 LIMD1Q9UGP4 676 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
HMGB1P3-201ENST00000502802 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
HMGB1P3-201ENST00000502802 ZNF777Q9ULD5 760 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P3-201ENST00000502802 PPP1R3GB7ZBB8 358 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 PTPREP23469 700 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 NUDT18Q6ZVK8 323 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms