RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
RFC1-204ENST00000502706 RYDENQ9NUL5 291 aaKnown RBP11.42□□□□□ -0.58
RFC1-204ENST00000502706 ADAM33Q9BZ11 813 aa11.4□□□□□ -0.58
RFC1-204ENST00000502706 EVI5O60447 810 aa11.39□□□□□ -0.59
RFC1-204ENST00000502706 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
RFC1-204ENST00000502706 NBR1Q14596 966 aa11.38□□□□□ -0.59
RFC1-204ENST00000502706 DNAJC5Q9H3Z4 198 aa11.38□□□□□ -0.59
RFC1-204ENST00000502706 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
RFC1-204ENST00000502706 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
RFC1-204ENST00000502706 PDE4AP27815 886 aa11.36□□□□□ -0.59
RFC1-204ENST00000502706 NKX1-1Q15270 411 aaPredicted RBP11.35□□□□□ -0.59
RFC1-204ENST00000502706 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
RFC1-204ENST00000502706 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
RFC1-204ENST00000502706 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
RFC1-204ENST00000502706 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
RFC1-204ENST00000502706 RABGEF1Q9UJ41 708 aa11.34□□□□□ -0.59
RFC1-204ENST00000502706 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
RFC1-204ENST00000502706 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
RFC1-204ENST00000502706 NYAP1Q6ZVC0 841 aa11.29□□□□□ -0.6
RFC1-204ENST00000502706 LAPTM4BQ86VI4 370 aa11.29□□□□□ -0.6
RFC1-204ENST00000502706 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
RFC1-204ENST00000502706 Q6ZNB5 142 aa11.28□□□□□ -0.6
RFC1-204ENST00000502706 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
RFC1-204ENST00000502706 BCAMP50895 628 aa11.27□□□□□ -0.61
RFC1-204ENST00000502706 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
RFC1-204ENST00000502706 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
RFC1-204ENST00000502706 COL9A1P20849 921 aa11.25□□□□□ -0.61
RFC1-204ENST00000502706 FBXW7Q969H0 707 aa11.25□□□□□ -0.61
RFC1-204ENST00000502706 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
RFC1-204ENST00000502706 KCNC4Q03721 635 aa11.23□□□□□ -0.61
RFC1-204ENST00000502706 MFSD10Q14728 455 aa11.22□□□□□ -0.61
RFC1-204ENST00000502706 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
RFC1-204ENST00000502706 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
RFC1-204ENST00000502706 PHF14O94880 888 aa11.21□□□□□ -0.61
RFC1-204ENST00000502706 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
RFC1-204ENST00000502706 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
RFC1-204ENST00000502706 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
RFC1-204ENST00000502706 KIAA1468Q9P260 1216 aa11.2□□□□□ -0.62
RFC1-204ENST00000502706 LAPTM4AQ15012 233 aa11.19□□□□□ -0.62
RFC1-204ENST00000502706 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
RFC1-204ENST00000502706 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
RFC1-204ENST00000502706 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
RFC1-204ENST00000502706 SEPT9Q9UHD8 586 aaPredicted RBP11.14□□□□□ -0.63
RFC1-204ENST00000502706 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
RFC1-204ENST00000502706 TSR3Q9UJK0 312 aaKnown RBP11.13□□□□□ -0.63
RFC1-204ENST00000502706 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
RFC1-204ENST00000502706 EPAS1Q99814 870 aa11.12□□□□□ -0.63
RFC1-204ENST00000502706 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
RFC1-204ENST00000502706 TRIM6-TRIM34B2RNG4 842 aa11.11□□□□□ -0.63
RFC1-204ENST00000502706 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
RFC1-204ENST00000502706 HPS5Q9UPZ3 1129 aa11.1□□□□□ -0.63
RFC1-204ENST00000502706 GFRA3O60609 400 aa11.07□□□□□ -0.64
RFC1-204ENST00000502706 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
RFC1-204ENST00000502706 LCE2BO14633 110 aa11.06□□□□□ -0.64
RFC1-204ENST00000502706 CAMK2BQ13554 666 aa11.01□□□□□ -0.65
RFC1-204ENST00000502706 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
RFC1-204ENST00000502706 PPP4CP60510 307 aa11□□□□□ -0.65
RFC1-204ENST00000502706 PACS2Q86VP3 889 aa11□□□□□ -0.65
RFC1-204ENST00000502706 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
RFC1-204ENST00000502706 DPYSL4O14531 572 aa10.99□□□□□ -0.65
RFC1-204ENST00000502706 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
RFC1-204ENST00000502706 PRKD2Q9BZL6 878 aa10.99□□□□□ -0.65
RFC1-204ENST00000502706 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
RFC1-204ENST00000502706 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
RFC1-204ENST00000502706 DDX12PQ92771 950 aa10.96□□□□□ -0.65
RFC1-204ENST00000502706 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
RFC1-204ENST00000502706 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
RFC1-204ENST00000502706 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
RFC1-204ENST00000502706 MAP3K7O43318 606 aa10.92□□□□□ -0.66
RFC1-204ENST00000502706 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
RFC1-204ENST00000502706 SAMD7Q7Z3H4 446 aa10.92□□□□□ -0.66
RFC1-204ENST00000502706 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
RFC1-204ENST00000502706 MTRQ99707 1265 aa10.91□□□□□ -0.66
RFC1-204ENST00000502706 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
RFC1-204ENST00000502706 CDCA7LQ96GN5 454 aa10.88□□□□□ -0.67
RFC1-204ENST00000502706 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
RFC1-204ENST00000502706 ABCC9O60706 1549 aa10.88□□□□□ -0.67
RFC1-204ENST00000502706 PRSS12P56730 875 aa10.87□□□□□ -0.67
RFC1-204ENST00000502706 SMAPO00193 183 aa10.86□□□□□ -0.67
RFC1-204ENST00000502706 ZNF787Q6DD87 383 aa10.86□□□□□ -0.67
RFC1-204ENST00000502706 CERKQ8TCT0 537 aa10.86□□□□□ -0.67
RFC1-204ENST00000502706 PDIA6Q15084 440 aa10.85□□□□□ -0.67
RFC1-204ENST00000502706 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
RFC1-204ENST00000502706 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
RFC1-204ENST00000502706 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
RFC1-204ENST00000502706 TATDN2Q93075 761 aa10.83□□□□□ -0.68
RFC1-204ENST00000502706 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
RFC1-204ENST00000502706 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
RFC1-204ENST00000502706 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
RFC1-204ENST00000502706 GGCXP38435 758 aa10.8□□□□□ -0.68
RFC1-204ENST00000502706 APLP1P51693 650 aa10.8□□□□□ -0.68
RFC1-204ENST00000502706 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
RFC1-204ENST00000502706 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
RFC1-204ENST00000502706 C3orf80F5H4A9 247 aa10.79□□□□□ -0.68
RFC1-204ENST00000502706 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
RFC1-204ENST00000502706 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
RFC1-204ENST00000502706 RNF40O75150 1001 aa10.78□□□□□ -0.68
RFC1-204ENST00000502706 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.68
RFC1-204ENST00000502706 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
RFC1-204ENST00000502706 ZNF775Q96BV0 537 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms