RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
CMSS1-209ENST00000497345 ADAM33Q9BZ11 813 aa8.33□□□□□ -1.08
CMSS1-209ENST00000497345 PCDHGA10Q9Y5H3 936 aa8.32□□□□□ -1.08
CMSS1-209ENST00000497345 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
CMSS1-209ENST00000497345 DPYSL4O14531 572 aa8.3□□□□□ -1.08
CMSS1-209ENST00000497345 ZBED2Q9BTP6 218 aa8.3□□□□□ -1.08
CMSS1-209ENST00000497345 PHF14O94880 888 aa8.29□□□□□ -1.08
CMSS1-209ENST00000497345 MROH2BQ7Z745 1585 aa8.28□□□□□ -1.08
CMSS1-209ENST00000497345 BHMG1C9JSJ3 638 aaPredicted RBP8.28□□□□□ -1.08
CMSS1-209ENST00000497345 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
CMSS1-209ENST00000497345 RSF1Q96T23 1441 aaPredicted RBP8.28□□□□□ -1.08
CMSS1-209ENST00000497345 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
CMSS1-209ENST00000497345 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
CMSS1-209ENST00000497345 EPAS1Q99814 870 aa8.25□□□□□ -1.09
CMSS1-209ENST00000497345 WDR70Q9NW82 654 aa8.25□□□□□ -1.09
CMSS1-209ENST00000497345 PPP1R3GB7ZBB8 358 aa8.24□□□□□ -1.09
CMSS1-209ENST00000497345 E2F4Q16254 413 aa8.24□□□□□ -1.09
CMSS1-209ENST00000497345 COL9A1P20849 921 aa8.23□□□□□ -1.09
CMSS1-209ENST00000497345 WIZO95785 1651 aa8.23□□□□□ -1.09
CMSS1-209ENST00000497345 BAZ1AQ9NRL2 1556 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-209ENST00000497345 SPDYE16A6NNV3 312 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-209ENST00000497345 C6orf132Q5T0Z8 1188 aa8.22□□□□□ -1.09
CMSS1-209ENST00000497345 MRPL50Q8N5N7 158 aaKnown RBP8.22□□□□□ -1.09
CMSS1-209ENST00000497345 DDX12PQ92771 950 aa8.22□□□□□ -1.09
CMSS1-209ENST00000497345 SMARCA4P51532 1647 aa8.21□□□□□ -1.09
CMSS1-209ENST00000497345 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
CMSS1-209ENST00000497345 PDIA6Q15084 440 aa8.21□□□□□ -1.1
CMSS1-209ENST00000497345 NBPF3Q9H094 633 aa8.21□□□□□ -1.1
CMSS1-209ENST00000497345 PLA2G2EQ9NZK7 142 aa8.21□□□□□ -1.1
CMSS1-209ENST00000497345 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.1
CMSS1-209ENST00000497345 PTPN5P54829 565 aa8.2□□□□□ -1.1
CMSS1-209ENST00000497345 PROX2Q3B8N5 592 aa8.2□□□□□ -1.1
CMSS1-209ENST00000497345 RBM33Q96EV2 1170 aaKnown RBP8.2□□□□□ -1.1
CMSS1-209ENST00000497345 ARIH1Q9Y4X5 557 aaPredicted RBP8.2□□□□□ -1.1
CMSS1-209ENST00000497345 WNT2BQ93097 391 aa8.19□□□□□ -1.1
CMSS1-209ENST00000497345 THSD4Q6ZMP0 1018 aa8.18□□□□□ -1.1
CMSS1-209ENST00000497345 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-209ENST00000497345 KIAA1468Q9P260 1216 aa8.17□□□□□ -1.1
CMSS1-209ENST00000497345 EN1Q05925 392 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-209ENST00000497345 NBR1Q14596 966 aa8.16□□□□□ -1.1
CMSS1-209ENST00000497345 EIF4G1Q04637 1599 aaKnown RBP8.14□□□□□ -1.11
CMSS1-209ENST00000497345 LAPTM4BQ86VI4 370 aa8.14□□□□□ -1.11
CMSS1-209ENST00000497345 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
CMSS1-209ENST00000497345 GRXCR2A6NFK2 248 aa8.13□□□□□ -1.11
CMSS1-209ENST00000497345 TRIM6-TRIM34B2RNG4 842 aa8.13□□□□□ -1.11
CMSS1-209ENST00000497345 MAP3K7O43318 606 aa8.13□□□□□ -1.11
CMSS1-209ENST00000497345 TSR1Q2NL82 804 aaKnown RBP8.13□□□□□ -1.11
CMSS1-209ENST00000497345 ANKK1Q8NFD2 765 aa8.11□□□□□ -1.11
CMSS1-209ENST00000497345 PRIM1P49642 420 aaKnown RBP8.1□□□□□ -1.11
CMSS1-209ENST00000497345 ZFRQ96KR1 1074 aaKnown RBP8.1□□□□□ -1.11
CMSS1-209ENST00000497345 ATAD2BQ9ULI0 1458 aa8.1□□□□□ -1.11
CMSS1-209ENST00000497345 OSBPP22059 807 aa8.09□□□□□ -1.11
CMSS1-209ENST00000497345 SEPT9Q9UHD8 586 aaPredicted RBP8.09□□□□□ -1.11
CMSS1-209ENST00000497345 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
CMSS1-209ENST00000497345 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
CMSS1-209ENST00000497345 BAZ1BQ9UIG0 1483 aaKnown RBP8.08□□□□□ -1.12
CMSS1-209ENST00000497345 SOWAHBA6NEL2 793 aa8.08□□□□□ -1.12
CMSS1-209ENST00000497345 PACS2Q86VP3 889 aa8.08□□□□□ -1.12
CMSS1-209ENST00000497345 BCAMP50895 628 aa8.07□□□□□ -1.12
CMSS1-209ENST00000497345 FAM98CQ17RN3 349 aaKnown RBP8.07□□□□□ -1.12
CMSS1-209ENST00000497345 CERKQ8TCT0 537 aa8.07□□□□□ -1.12
CMSS1-209ENST00000497345 CDCA7LQ96GN5 454 aa8.07□□□□□ -1.12
CMSS1-209ENST00000497345 CC2D2AQ9P2K1 1620 aa8.07□□□□□ -1.12
CMSS1-209ENST00000497345 SMARCA2P51531 1590 aa8.06□□□□□ -1.12
CMSS1-209ENST00000497345 PRSS12P56730 875 aa8.06□□□□□ -1.12
CMSS1-209ENST00000497345 IFFO2Q5TF58 517 aa8.06□□□□□ -1.12
CMSS1-209ENST00000497345 ARHGEF1Q92888 912 aaKnown RBP8.06□□□□□ -1.12
CMSS1-209ENST00000497345 CCDC88BA6NC98 1476 aa8.05□□□□□ -1.12
CMSS1-209ENST00000497345 FAM198AQ9UFP1 575 aa8.04□□□□□ -1.12
CMSS1-209ENST00000497345 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
CMSS1-209ENST00000497345 CDHR5Q9HBB8 845 aa8.03□□□□□ -1.12
CMSS1-209ENST00000497345 NYAP1Q6ZVC0 841 aa8.02□□□□□ -1.13
CMSS1-209ENST00000497345 KCNV2Q8TDN2 545 aa8.02□□□□□ -1.13
CMSS1-209ENST00000497345 LRCH3Q96II8 777 aa8.02□□□□□ -1.13
CMSS1-209ENST00000497345 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
CMSS1-209ENST00000497345 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.02□□□□□ -1.13
CMSS1-209ENST00000497345 SMAPO00193 183 aa8.01□□□□□ -1.13
CMSS1-209ENST00000497345 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
CMSS1-209ENST00000497345 NCAPD3P42695 1498 aa8□□□□□ -1.13
CMSS1-209ENST00000497345 C3orf80F5H4A9 247 aa8□□□□□ -1.13
CMSS1-209ENST00000497345 TATDN2Q93075 761 aa8□□□□□ -1.13
CMSS1-209ENST00000497345 NPDC1Q9NQX5 325 aaPredicted RBP8□□□□□ -1.13
CMSS1-209ENST00000497345 PNMA3Q9UL41 463 aa8□□□□□ -1.13
CMSS1-209ENST00000497345 ITGBL1O95965 494 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-209ENST00000497345 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-209ENST00000497345 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
CMSS1-209ENST00000497345 HPS5Q9UPZ3 1129 aa7.99□□□□□ -1.13
CMSS1-209ENST00000497345 NBPF26B4DH59 902 aa7.98□□□□□ -1.13
CMSS1-209ENST00000497345 A0A0G2JS52 829 aa7.97□□□□□ -1.13
CMSS1-209ENST00000497345 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
CMSS1-209ENST00000497345 SAMD7Q7Z3H4 446 aa7.97□□□□□ -1.13
CMSS1-209ENST00000497345 HMGXB3Q12766 1538 aa7.97□□□□□ -1.13
CMSS1-209ENST00000497345 RGS20O76081 388 aa7.96□□□□□ -1.14
CMSS1-209ENST00000497345 PPP4CP60510 307 aa7.96□□□□□ -1.14
CMSS1-209ENST00000497345 PLCB2Q00722 1185 aa7.96□□□□□ -1.14
CMSS1-209ENST00000497345 TTC13Q8NBP0 860 aa7.96□□□□□ -1.14
CMSS1-209ENST00000497345 HDGFP51858 240 aaKnown RBP7.95□□□□□ -1.14
CMSS1-209ENST00000497345 PADI6Q6TGC4 694 aa7.95□□□□□ -1.14
CMSS1-209ENST00000497345 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
CMSS1-209ENST00000497345 KCNC4Q03721 635 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms