RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 TK2O00142 265 aa15.68■□□□□ 0.1
TARDBP-210ENST00000496840 DMRTA1Q5VZB9 504 aa15.68■□□□□ 0.1
TARDBP-210ENST00000496840 GRXCR2A6NFK2 248 aa15.66■□□□□ 0.1
TARDBP-210ENST00000496840 EN1Q05925 392 aaPredicted RBP15.66■□□□□ 0.1
TARDBP-210ENST00000496840 SLC4A5Q9BY07 1137 aa15.65■□□□□ 0.1
TARDBP-210ENST00000496840 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
TARDBP-210ENST00000496840 C6orf132Q5T0Z8 1188 aa15.63■□□□□ 0.09
TARDBP-210ENST00000496840 ADGRD1Q6QNK2 874 aa15.63■□□□□ 0.09
TARDBP-210ENST00000496840 OSBPP22059 807 aa15.62■□□□□ 0.09
TARDBP-210ENST00000496840 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
TARDBP-210ENST00000496840 MAP3K7O43318 606 aa15.6■□□□□ 0.09
TARDBP-210ENST00000496840 MLLT3P42568 568 aaPredicted RBP15.59■□□□□ 0.09
TARDBP-210ENST00000496840 ZBED2Q9BTP6 218 aa15.59■□□□□ 0.09
TARDBP-210ENST00000496840 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
TARDBP-210ENST00000496840 VPS9D1Q9Y2B5 631 aa15.58■□□□□ 0.08
TARDBP-210ENST00000496840 SEMA3EO15041 775 aa15.57■□□□□ 0.08
TARDBP-210ENST00000496840 COL9A1P20849 921 aa15.57■□□□□ 0.08
TARDBP-210ENST00000496840 HRO43593 1189 aa15.56■□□□□ 0.08
TARDBP-210ENST00000496840 TSR1Q2NL82 804 aaKnown RBP15.54■□□□□ 0.08
TARDBP-210ENST00000496840 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
TARDBP-210ENST00000496840 CERKQ8TCT0 537 aa15.51■□□□□ 0.07
TARDBP-210ENST00000496840 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
TARDBP-210ENST00000496840 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
TARDBP-210ENST00000496840 BHMG1C9JSJ3 638 aaPredicted RBP15.47■□□□□ 0.07
TARDBP-210ENST00000496840 PROX2Q3B8N5 592 aa15.46■□□□□ 0.07
TARDBP-210ENST00000496840 SMYD5Q6GMV2 418 aa15.46■□□□□ 0.07
TARDBP-210ENST00000496840 RNF166Q96A37 237 aaPredicted RBP15.45■□□□□ 0.06
TARDBP-210ENST00000496840 CDHR5Q9HBB8 845 aa15.45■□□□□ 0.06
TARDBP-210ENST00000496840 RABGEF1Q9UJ41 708 aa15.45■□□□□ 0.06
TARDBP-210ENST00000496840 TRIM6-TRIM34B2RNG4 842 aa15.43■□□□□ 0.06
TARDBP-210ENST00000496840 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
TARDBP-210ENST00000496840 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
TARDBP-210ENST00000496840 NPDC1Q9NQX5 325 aaPredicted RBP15.4■□□□□ 0.06
TARDBP-210ENST00000496840 RBM27Q9P2N5 1060 aaKnown RBP15.4■□□□□ 0.06
TARDBP-210ENST00000496840 PRSS12P56730 875 aa15.39■□□□□ 0.05
TARDBP-210ENST00000496840 CDCA7LQ96GN5 454 aa15.38■□□□□ 0.05
TARDBP-210ENST00000496840 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
TARDBP-210ENST00000496840 MRPL50Q8N5N7 158 aaKnown RBP15.37■□□□□ 0.05
TARDBP-210ENST00000496840 TSKSQ9UJT2 592 aa15.37■□□□□ 0.05
TARDBP-210ENST00000496840 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
TARDBP-210ENST00000496840 PTGDRQ13258 359 aa15.34■□□□□ 0.05
TARDBP-210ENST00000496840 LAPTM4BQ86VI4 370 aa15.34■□□□□ 0.05
TARDBP-210ENST00000496840 PACS2Q86VP3 889 aa15.34■□□□□ 0.05
TARDBP-210ENST00000496840 NUTM2FA1L443 756 aa15.32■□□□□ 0.04
TARDBP-210ENST00000496840 TTC13Q8NBP0 860 aa15.32■□□□□ 0.04
TARDBP-210ENST00000496840 RBM26Q5T8P6 1007 aaKnown RBP15.31■□□□□ 0.04
TARDBP-210ENST00000496840 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
TARDBP-210ENST00000496840 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
TARDBP-210ENST00000496840 FCHSD2O94868 740 aa15.28■□□□□ 0.04
TARDBP-210ENST00000496840 GOLGA8CPA6NN73 597 aa15.27■□□□□ 0.04
TARDBP-210ENST00000496840 PADI6Q6TGC4 694 aa15.27■□□□□ 0.04
TARDBP-210ENST00000496840 NBPF26B4DH59 902 aa15.26■□□□□ 0.03
TARDBP-210ENST00000496840 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
TARDBP-210ENST00000496840 KCTD12Q96CX2 325 aaKnown RBP15.26■□□□□ 0.03
TARDBP-210ENST00000496840 SEPT9Q9UHD8 586 aaPredicted RBP15.25■□□□□ 0.03
TARDBP-210ENST00000496840 TATDN2Q93075 761 aa15.23■□□□□ 0.03
TARDBP-210ENST00000496840 WNT2BQ93097 391 aa15.23■□□□□ 0.03
TARDBP-210ENST00000496840 ZFRQ96KR1 1074 aaKnown RBP15.22■□□□□ 0.03
TARDBP-210ENST00000496840 GPR37O15354 613 aa15.21■□□□□ 0.03
TARDBP-210ENST00000496840 HIC1Q14526 733 aa15.21■□□□□ 0.03
TARDBP-210ENST00000496840 HCSTQ9UBK5 93 aa15.21■□□□□ 0.03
TARDBP-210ENST00000496840 PNMA3Q9UL41 463 aa15.21■□□□□ 0.03
TARDBP-210ENST00000496840 C3orf80F5H4A9 247 aa15.2■□□□□ 0.02
TARDBP-210ENST00000496840 THSD4Q6ZMP0 1018 aa15.2■□□□□ 0.02
TARDBP-210ENST00000496840 ANKK1Q8NFD2 765 aa15.2■□□□□ 0.02
TARDBP-210ENST00000496840 NUDT18Q6ZVK8 323 aa15.19■□□□□ 0.02
TARDBP-210ENST00000496840 GPIHBP1Q8IV16 184 aa15.19■□□□□ 0.02
TARDBP-210ENST00000496840 SMAPO00193 183 aa15.17■□□□□ 0.02
TARDBP-210ENST00000496840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.16■□□□□ 0.02
TARDBP-210ENST00000496840 GNPATO15228 680 aa15.15■□□□□ 0.02
TARDBP-210ENST00000496840 SOWAHBA6NEL2 793 aa15.14■□□□□ 0.01
TARDBP-210ENST00000496840 EYA1Q99502 592 aa15.13■□□□□ 0.01
TARDBP-210ENST00000496840 ADGRG1Q9Y653 693 aa15.12■□□□□ 0.01
TARDBP-210ENST00000496840 LRCH3Q96II8 777 aa15.1■□□□□ 0.01
TARDBP-210ENST00000496840 RBM46Q8TBY0 533 aaKnown RBP15.09■□□□□ 0.01
TARDBP-210ENST00000496840 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-210ENST00000496840 BCAMP50895 628 aa15.08■□□□□ 0
TARDBP-210ENST00000496840 PTPN5P54829 565 aa15.08■□□□□ 0
TARDBP-210ENST00000496840 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0
TARDBP-210ENST00000496840 FECHP22830 423 aa15.06■□□□□ 0
TARDBP-210ENST00000496840 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
TARDBP-210ENST00000496840 OATP04181 439 aa15.05■□□□□ -0
TARDBP-210ENST00000496840 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
TARDBP-210ENST00000496840 TSR3Q9UJK0 312 aaKnown RBP15.03■□□□□ -0
TARDBP-210ENST00000496840 DNAJB2P25686 324 aa15.02■□□□□ -0
TARDBP-210ENST00000496840 FAM161AQ3B820 660 aa15.02■□□□□ -0
TARDBP-210ENST00000496840 NYAP1Q6ZVC0 841 aa15.02■□□□□ -0
TARDBP-210ENST00000496840 PXYLP1Q8TE99 480 aa15.02■□□□□ -0
TARDBP-210ENST00000496840 HPS5Q9UPZ3 1129 aa15□□□□□ -0.01
TARDBP-210ENST00000496840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
TARDBP-210ENST00000496840 SWT1Q5T5J6 900 aaKnown RBP14.99□□□□□ -0.01
TARDBP-210ENST00000496840 METTL3Q86U44 580 aaKnown RBP14.99□□□□□ -0.01
TARDBP-210ENST00000496840 WBP1LQ9NX94 342 aa14.99□□□□□ -0.01
TARDBP-210ENST00000496840 RCCD1A6NED2 376 aa14.98□□□□□ -0.01
TARDBP-210ENST00000496840 TMEM134Q9H6X4 195 aa14.98□□□□□ -0.01
TARDBP-210ENST00000496840 MAP2K5Q13163 448 aa14.97□□□□□ -0.01
TARDBP-210ENST00000496840 SLF2Q8IX21 1173 aa14.96□□□□□ -0.01
TARDBP-210ENST00000496840 BCANQ96GW7 911 aa14.96□□□□□ -0.01
TARDBP-210ENST00000496840 PPP4CP60510 307 aa14.95□□□□□ -0.02
TARDBP-210ENST00000496840 NECTIN2Q92692 538 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms