RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 KIAA1107Q9UPP5 1409 aa12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
GAPVD1-219ENST00000495955 NCOA1Q15788 1441 aa12.84□□□□□ -0.35
GAPVD1-219ENST00000495955 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
GAPVD1-219ENST00000495955 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
GAPVD1-219ENST00000495955 NAIPQ13075 1403 aa12.83□□□□□ -0.35
GAPVD1-219ENST00000495955 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-219ENST00000495955 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
GAPVD1-219ENST00000495955 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
GAPVD1-219ENST00000495955 SLC52A1Q9NWF4 448 aa12.83□□□□□ -0.36
GAPVD1-219ENST00000495955 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
GAPVD1-219ENST00000495955 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
GAPVD1-219ENST00000495955 A2MP01023 1474 aa12.81□□□□□ -0.36
GAPVD1-219ENST00000495955 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-219ENST00000495955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.8□□□□□ -0.36
GAPVD1-219ENST00000495955 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
GAPVD1-219ENST00000495955 SOX12O15370 315 aa12.79□□□□□ -0.36
GAPVD1-219ENST00000495955 TSPOAP1O95153 1857 aa12.79□□□□□ -0.36
GAPVD1-219ENST00000495955 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
GAPVD1-219ENST00000495955 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
GAPVD1-219ENST00000495955 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
GAPVD1-219ENST00000495955 A0A0G2JS52 829 aa12.78□□□□□ -0.36
GAPVD1-219ENST00000495955 NEO1Q92859 1461 aa12.78□□□□□ -0.36
GAPVD1-219ENST00000495955 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
GAPVD1-219ENST00000495955 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.36
GAPVD1-219ENST00000495955 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.36
GAPVD1-219ENST00000495955 DUOX2Q9NRD8 1548 aa12.76□□□□□ -0.37
GAPVD1-219ENST00000495955 CC2D1BQ5T0F9 858 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-219ENST00000495955 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
GAPVD1-219ENST00000495955 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-219ENST00000495955 NGDNQ8NEJ9 315 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-219ENST00000495955 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
GAPVD1-219ENST00000495955 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-219ENST00000495955 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
GAPVD1-219ENST00000495955 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
GAPVD1-219ENST00000495955 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
GAPVD1-219ENST00000495955 STAC3Q96MF2 364 aa12.74□□□□□ -0.37
GAPVD1-219ENST00000495955 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
GAPVD1-219ENST00000495955 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
GAPVD1-219ENST00000495955 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
GAPVD1-219ENST00000495955 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
GAPVD1-219ENST00000495955 ATP10AO60312 1499 aa12.73□□□□□ -0.37
GAPVD1-219ENST00000495955 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
GAPVD1-219ENST00000495955 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
GAPVD1-219ENST00000495955 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
GAPVD1-219ENST00000495955 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
GAPVD1-219ENST00000495955 SHROOM2Q13796 1616 aa12.72□□□□□ -0.37
GAPVD1-219ENST00000495955 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
GAPVD1-219ENST00000495955 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
GAPVD1-219ENST00000495955 IDI1Q13907 227 aa12.71□□□□□ -0.38
GAPVD1-219ENST00000495955 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
GAPVD1-219ENST00000495955 ATF3P18847 181 aa12.7□□□□□ -0.38
GAPVD1-219ENST00000495955 TNRQ92752 1358 aa12.7□□□□□ -0.38
GAPVD1-219ENST00000495955 MYT1Q01538 1121 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 ZFYVE16Q7Z3T8 1539 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 TERF2IPQ9NYB0 399 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 RPGRIP1LQ68CZ1 1315 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
GAPVD1-219ENST00000495955 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
GAPVD1-219ENST00000495955 YEATS2Q9ULM3 1422 aa12.67□□□□□ -0.38
GAPVD1-219ENST00000495955 USP47Q96K76 1375 aa12.67□□□□□ -0.38
GAPVD1-219ENST00000495955 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-219ENST00000495955 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
GAPVD1-219ENST00000495955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.66□□□□□ -0.38
GAPVD1-219ENST00000495955 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-219ENST00000495955 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
GAPVD1-219ENST00000495955 HNRNPUQ00839 825 aaKnown RBP eCLIP12.64□□□□□ -0.39
GAPVD1-219ENST00000495955 ANKRD30BQ9BXX2 1392 aa12.64□□□□□ -0.39
GAPVD1-219ENST00000495955 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
GAPVD1-219ENST00000495955 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
GAPVD1-219ENST00000495955 PRAM1Q96QH2 718 aa12.63□□□□□ -0.39
GAPVD1-219ENST00000495955 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-219ENST00000495955 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
GAPVD1-219ENST00000495955 PREX2Q70Z35 1606 aa12.63□□□□□ -0.39
GAPVD1-219ENST00000495955 PSME1Q06323 249 aa12.62□□□□□ -0.39
GAPVD1-219ENST00000495955 MIER1Q8N108 512 aa12.62□□□□□ -0.39
GAPVD1-219ENST00000495955 CSB-PGBD3P0DP91 1061 aa12.62□□□□□ -0.39
GAPVD1-219ENST00000495955 CNTLNQ9NXG0 1405 aa12.61□□□□□ -0.39
GAPVD1-219ENST00000495955 ABCC1P33527 1531 aa12.61□□□□□ -0.39
GAPVD1-219ENST00000495955 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
GAPVD1-219ENST00000495955 KDM6BO15054 1643 aa12.61□□□□□ -0.39
GAPVD1-219ENST00000495955 HSPA2P54652 639 aa12.61□□□□□ -0.39
GAPVD1-219ENST00000495955 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
GAPVD1-219ENST00000495955 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
GAPVD1-219ENST00000495955 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
GAPVD1-219ENST00000495955 MBD5Q9P267 1494 aa12.6□□□□□ -0.39
GAPVD1-219ENST00000495955 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
GAPVD1-219ENST00000495955 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
GAPVD1-219ENST00000495955 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
GAPVD1-219ENST00000495955 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.39
GAPVD1-219ENST00000495955 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
GAPVD1-219ENST00000495955 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.4
GAPVD1-219ENST00000495955 ADGRL2O95490 1459 aa12.57□□□□□ -0.4
GAPVD1-219ENST00000495955 MAGI2Q86UL8 1455 aa12.57□□□□□ -0.4
GAPVD1-219ENST00000495955 PANK3Q9H999 370 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms