RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 NBPF3Q9H094 633 aa4.86□□□□□ -1.63
KCTD3-205ENST00000495537 MRPL50Q8N5N7 158 aaKnown RBP4.86□□□□□ -1.63
KCTD3-205ENST00000495537 PTPN5P54829 565 aa4.85□□□□□ -1.63
KCTD3-205ENST00000495537 ZDHHC16Q969W1 377 aa4.85□□□□□ -1.63
KCTD3-205ENST00000495537 SUPT16HQ9Y5B9 1047 aaKnown RBP4.85□□□□□ -1.63
KCTD3-205ENST00000495537 EVI5O60447 810 aa4.85□□□□□ -1.63
KCTD3-205ENST00000495537 DDX27Q96GQ7 796 aaKnown RBP4.85□□□□□ -1.63
KCTD3-205ENST00000495537 BHMG1C9JSJ3 638 aaPredicted RBP4.84□□□□□ -1.63
KCTD3-205ENST00000495537 MAP3K9P80192 1104 aa4.84□□□□□ -1.63
KCTD3-205ENST00000495537 THSD4Q6ZMP0 1018 aa4.84□□□□□ -1.63
KCTD3-205ENST00000495537 WNT2BQ93097 391 aa4.84□□□□□ -1.63
KCTD3-205ENST00000495537 ZBED2Q9BTP6 218 aa4.84□□□□□ -1.63
KCTD3-205ENST00000495537 NCKAP5LQ9HCH0 1330 aa4.84□□□□□ -1.64
KCTD3-205ENST00000495537 LARP6Q9BRS8 491 aaKnown RBP4.83□□□□□ -1.64
KCTD3-205ENST00000495537 UBE2Q2Q8WVN8 375 aa4.82□□□□□ -1.64
KCTD3-205ENST00000495537 MFSD10Q14728 455 aa4.81□□□□□ -1.64
KCTD3-205ENST00000495537 FBXW7Q969H0 707 aa4.81□□□□□ -1.64
KCTD3-205ENST00000495537 PPP1R3GB7ZBB8 358 aa4.81□□□□□ -1.64
KCTD3-205ENST00000495537 ADAM33Q9BZ11 813 aa4.81□□□□□ -1.64
KCTD3-205ENST00000495537 GTPBP6O43824 516 aaPredicted RBP4.81□□□□□ -1.64
KCTD3-205ENST00000495537 ANKK1Q8NFD2 765 aa4.8□□□□□ -1.64
KCTD3-205ENST00000495537 RABGEF1Q9UJ41 708 aa4.8□□□□□ -1.64
KCTD3-205ENST00000495537 A0A0G2JS52 829 aa4.8□□□□□ -1.64
KCTD3-205ENST00000495537 TYW1BQ6NUM6 668 aa4.8□□□□□ -1.64
KCTD3-205ENST00000495537 LAPTM4BQ86VI4 370 aa4.8□□□□□ -1.64
KCTD3-205ENST00000495537 SLC24A1O60721 1099 aa4.79□□□□□ -1.64
KCTD3-205ENST00000495537 NYAP1Q6ZVC0 841 aa4.79□□□□□ -1.64
KCTD3-205ENST00000495537 ONECUT3O60422 494 aaPredicted RBP4.79□□□□□ -1.64
KCTD3-205ENST00000495537 PHF14O94880 888 aa4.79□□□□□ -1.64
KCTD3-205ENST00000495537 ERICH6BQ5W0A0 696 aa4.79□□□□□ -1.64
KCTD3-205ENST00000495537 IRX2Q9BZI1 471 aaPredicted RBP4.79□□□□□ -1.64
KCTD3-205ENST00000495537 CCER1Q8TC90 406 aaPredicted RBP4.78□□□□□ -1.64
KCTD3-205ENST00000495537 EPAS1Q99814 870 aa4.78□□□□□ -1.64
KCTD3-205ENST00000495537 YTHDC1Q96MU7 727 aaKnown RBP4.77□□□□□ -1.65
KCTD3-205ENST00000495537 PCDHGA10Q9Y5H3 936 aa4.77□□□□□ -1.65
KCTD3-205ENST00000495537 ZCCHC6Q5VYS8 1495 aaKnown RBP4.77□□□□□ -1.65
KCTD3-205ENST00000495537 DCAF8L2P0C7V8 631 aa4.76□□□□□ -1.65
KCTD3-205ENST00000495537 EMILIN3Q9NT22 766 aa4.76□□□□□ -1.65
KCTD3-205ENST00000495537 ITGBL1O95965 494 aaPredicted RBP4.75□□□□□ -1.65
KCTD3-205ENST00000495537 RBM19Q9Y4C8 960 aaKnown RBP4.75□□□□□ -1.65
KCTD3-205ENST00000495537 SOWAHBA6NEL2 793 aa4.74□□□□□ -1.65
KCTD3-205ENST00000495537 COL9A1P20849 921 aa4.74□□□□□ -1.65
KCTD3-205ENST00000495537 PROX2Q3B8N5 592 aa4.74□□□□□ -1.65
KCTD3-205ENST00000495537 FANCIQ9NVI1 1328 aa4.74□□□□□ -1.65
KCTD3-205ENST00000495537 KIAA1468Q9P260 1216 aa4.74□□□□□ -1.65
KCTD3-205ENST00000495537 DAXXQ9UER7 740 aaPredicted RBP4.74□□□□□ -1.65
KCTD3-205ENST00000495537 CAMK2BQ13554 666 aa4.73□□□□□ -1.65
KCTD3-205ENST00000495537 C6orf132Q5T0Z8 1188 aa4.73□□□□□ -1.65
KCTD3-205ENST00000495537 ZFRQ96KR1 1074 aaKnown RBP4.73□□□□□ -1.65
KCTD3-205ENST00000495537 TRIM6-TRIM34B2RNG4 842 aa4.72□□□□□ -1.65
KCTD3-205ENST00000495537 BCAMP50895 628 aa4.72□□□□□ -1.65
KCTD3-205ENST00000495537 KCNC4Q03721 635 aa4.72□□□□□ -1.65
KCTD3-205ENST00000495537 FAM98CQ17RN3 349 aaKnown RBP4.72□□□□□ -1.65
KCTD3-205ENST00000495537 EIF5BO60841 1220 aaKnown RBP4.72□□□□□ -1.65
KCTD3-205ENST00000495537 SALL2Q9Y467 1007 aaPredicted RBP4.72□□□□□ -1.65
KCTD3-205ENST00000495537 PACS2Q86VP3 889 aa4.71□□□□□ -1.66
KCTD3-205ENST00000495537 LRCH3Q96II8 777 aa4.71□□□□□ -1.66
KCTD3-205ENST00000495537 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.71□□□□□ -1.66
KCTD3-205ENST00000495537 TSR3Q9UJK0 312 aaKnown RBP4.71□□□□□ -1.66
KCTD3-205ENST00000495537 DPYSL4O14531 572 aa4.7□□□□□ -1.66
KCTD3-205ENST00000495537 DEKP35659 375 aaKnown RBP4.7□□□□□ -1.66
KCTD3-205ENST00000495537 CADPS2Q86UW7 1296 aa4.7□□□□□ -1.66
KCTD3-205ENST00000495537 LAPTM4AQ15012 233 aa4.69□□□□□ -1.66
KCTD3-205ENST00000495537 WBP1LQ9NX94 342 aa4.69□□□□□ -1.66
KCTD3-205ENST00000495537 SPDYE16A6NNV3 312 aaPredicted RBP4.69□□□□□ -1.66
KCTD3-205ENST00000495537 SEPT9Q9UHD8 586 aaPredicted RBP4.69□□□□□ -1.66
KCTD3-205ENST00000495537 CERKQ8TCT0 537 aa4.68□□□□□ -1.66
KCTD3-205ENST00000495537 RBM33Q96EV2 1170 aaKnown RBP4.68□□□□□ -1.66
KCTD3-205ENST00000495537 HPS5Q9UPZ3 1129 aa4.68□□□□□ -1.66
KCTD3-205ENST00000495537 WRNQ14191 1432 aaPredicted RBP eCLIP4.68□□□□□ -1.66
KCTD3-205ENST00000495537 EN1Q05925 392 aaPredicted RBP4.67□□□□□ -1.66
KCTD3-205ENST00000495537 MAP3K7O43318 606 aa4.67□□□□□ -1.66
KCTD3-205ENST00000495537 PPP4CP60510 307 aa4.67□□□□□ -1.66
KCTD3-205ENST00000495537 NBR1Q14596 966 aa4.67□□□□□ -1.66
KCTD3-205ENST00000495537 DDX12PQ92771 950 aa4.67□□□□□ -1.66
KCTD3-205ENST00000495537 Q6ZNB5 142 aa4.66□□□□□ -1.66
KCTD3-205ENST00000495537 BBXQ8WY36 941 aaPredicted RBP4.66□□□□□ -1.66
KCTD3-205ENST00000495537 PDIA6Q15084 440 aa4.66□□□□□ -1.66
KCTD3-205ENST00000495537 HDGFP51858 240 aaKnown RBP4.65□□□□□ -1.66
KCTD3-205ENST00000495537 NECTIN2Q92692 538 aa4.65□□□□□ -1.66
KCTD3-205ENST00000495537 PKNOX2Q96KN3 472 aa4.65□□□□□ -1.66
KCTD3-205ENST00000495537 NBPF26B4DH59 902 aa4.64□□□□□ -1.67
KCTD3-205ENST00000495537 PRSS12P56730 875 aa4.64□□□□□ -1.67
KCTD3-205ENST00000495537 CCDC136Q96JN2 1154 aa4.64□□□□□ -1.67
KCTD3-205ENST00000495537 IGSF5Q9NSI5 407 aa4.64□□□□□ -1.67
KCTD3-205ENST00000495537 TSKSQ9UJT2 592 aa4.64□□□□□ -1.67
KCTD3-205ENST00000495537 CDCA7LQ96GN5 454 aa4.63□□□□□ -1.67
KCTD3-205ENST00000495537 TSR1Q2NL82 804 aaKnown RBP4.63□□□□□ -1.67
KCTD3-205ENST00000495537 IL21Q9HBE4 155 aa4.63□□□□□ -1.67
KCTD3-205ENST00000495537 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.63□□□□□ -1.67
KCTD3-205ENST00000495537 WDR70Q9NW82 654 aa4.62□□□□□ -1.67
KCTD3-205ENST00000495537 ARIH1Q9Y4X5 557 aaPredicted RBP4.62□□□□□ -1.67
KCTD3-205ENST00000495537 E2F4Q16254 413 aa4.62□□□□□ -1.67
KCTD3-205ENST00000495537 SAMD7Q7Z3H4 446 aa4.62□□□□□ -1.67
KCTD3-205ENST00000495537 SPRYD3Q8NCJ5 442 aa4.62□□□□□ -1.67
KCTD3-205ENST00000495537 RBM27Q9P2N5 1060 aaKnown RBP4.62□□□□□ -1.67
KCTD3-205ENST00000495537 SLC4A3P48751 1232 aa4.61□□□□□ -1.67
KCTD3-205ENST00000495537 TATDN2Q93075 761 aa4.61□□□□□ -1.67
KCTD3-205ENST00000495537 GFRA3O60609 400 aa4.61□□□□□ -1.67
KCTD3-205ENST00000495537 TJAP1Q5JTD0 557 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms