RNA–Protein interactions for RNA: ENST00000495338.5

PHF20-214, Transcript of PHD finger protein 20, humanhuman

TSL 4

Gene PHF20, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-214ENST00000495338 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
PHF20-214ENST00000495338 SAMD9LQ8IVG5 1584 aa13.84□□□□□ -0.19
PHF20-214ENST00000495338 NPHP4O75161 1426 aaPredicted RBP13.84□□□□□ -0.19
PHF20-214ENST00000495338 MED14O60244 1454 aa13.84□□□□□ -0.19
PHF20-214ENST00000495338 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
PHF20-214ENST00000495338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■■□□□ 12.2
PHF20-214ENST00000495338 IQGAP1P46940 1657 aa13.82□□□□□ -0.2
PHF20-214ENST00000495338 LRRIQ1Q96JM4 1722 aa13.81□□□□□ -0.2
PHF20-214ENST00000495338 SYNMO15061 1565 aa13.81□□□□□ -0.2
PHF20-214ENST00000495338 GGT6Q6P531 493 aa13.81□□□□□ -0.2
PHF20-214ENST00000495338 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
PHF20-214ENST00000495338 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
PHF20-214ENST00000495338 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
PHF20-214ENST00000495338 FAM135BQ49AJ0 1406 aa13.79□□□□□ -0.2
PHF20-214ENST00000495338 LRP6O75581 1613 aa13.79□□□□□ -0.2
PHF20-214ENST00000495338 ZC3H13Q5T200 1668 aaKnown RBP13.79□□□□□ -0.2
PHF20-214ENST00000495338 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
PHF20-214ENST00000495338 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
PHF20-214ENST00000495338 TNRQ92752 1358 aa13.77□□□□□ -0.21
PHF20-214ENST00000495338 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
PHF20-214ENST00000495338 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
PHF20-214ENST00000495338 A2MP01023 1474 aa13.74□□□□□ -0.21
PHF20-214ENST00000495338 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
PHF20-214ENST00000495338 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
PHF20-214ENST00000495338 INO80Q9ULG1 1556 aaPredicted RBP13.73□□□□□ -0.21
PHF20-214ENST00000495338 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
PHF20-214ENST00000495338 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.216e-7■■■■□ 23.7
PHF20-214ENST00000495338 EP400Q96L91 3159 aa13.72□□□□□ -0.21
PHF20-214ENST00000495338 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.21
PHF20-214ENST00000495338 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
PHF20-214ENST00000495338 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
PHF20-214ENST00000495338 PZPP20742 1482 aa13.68□□□□□ -0.22
PHF20-214ENST00000495338 THEMISQ8N1K5 641 aaPredicted RBP13.68□□□□□ -0.22
PHF20-214ENST00000495338 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
PHF20-214ENST00000495338 MIA2Q96PC5 1412 aa13.67□□□□□ -0.22
PHF20-214ENST00000495338 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
PHF20-214ENST00000495338 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
PHF20-214ENST00000495338 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
PHF20-214ENST00000495338 FAM135AQ9P2D6 1515 aa13.65□□□□□ -0.22
PHF20-214ENST00000495338 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
PHF20-214ENST00000495338 LTKP29376 864 aa13.65□□□□□ -0.22
PHF20-214ENST00000495338 TMEM94Q12767 1356 aa13.64□□□□□ -0.23
PHF20-214ENST00000495338 JCADQ9P266 1359 aa13.64□□□□□ -0.23
PHF20-214ENST00000495338 RGS12O14924 1447 aa13.64□□□□□ -0.23
PHF20-214ENST00000495338 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
PHF20-214ENST00000495338 RXRBP28702 533 aa13.63□□□□□ -0.23
PHF20-214ENST00000495338 CLIP1P30622 1438 aa13.63□□□□□ -0.23
PHF20-214ENST00000495338 CDK11AQ9UQ88 783 aaPredicted RBP13.62□□□□□ -0.23
PHF20-214ENST00000495338 ADGBQ8N7X0 1667 aa13.61□□□□□ -0.23
PHF20-214ENST00000495338 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
PHF20-214ENST00000495338 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
PHF20-214ENST00000495338 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
PHF20-214ENST00000495338 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
PHF20-214ENST00000495338 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
PHF20-214ENST00000495338 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
PHF20-214ENST00000495338 KDM5DQ9BY66 1539 aa13.59□□□□□ -0.23
PHF20-214ENST00000495338 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
PHF20-214ENST00000495338 SCAF11Q99590 1463 aaKnown RBP13.57□□□□□ -0.24
PHF20-214ENST00000495338 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
PHF20-214ENST00000495338 POTEHQ6S545 545 aa13.56□□□□□ -0.24
PHF20-214ENST00000495338 ZNF644Q9H582 1327 aaPredicted RBP13.56□□□□□ -0.24
PHF20-214ENST00000495338 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
PHF20-214ENST00000495338 KIF3BO15066 747 aa13.55□□□□□ -0.24
PHF20-214ENST00000495338 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
PHF20-214ENST00000495338 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
PHF20-214ENST00000495338 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
PHF20-214ENST00000495338 DHX29Q7Z478 1369 aaKnown RBP13.54□□□□□ -0.24
PHF20-214ENST00000495338 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
PHF20-214ENST00000495338 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
PHF20-214ENST00000495338 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
PHF20-214ENST00000495338 AFF2P51816 1311 aa13.53□□□□□ -0.24
PHF20-214ENST00000495338 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
PHF20-214ENST00000495338 SPATA31A6Q5VVP1 1343 aa13.52□□□□□ -0.25
PHF20-214ENST00000495338 WASHC2CQ9Y4E1 1318 aa13.52□□□□□ -0.25
PHF20-214ENST00000495338 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
PHF20-214ENST00000495338 DIP2AQ14689 1571 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 SLIT1O75093 1534 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 ERVK-7P63135 1459 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 LRRC9Q6ZRR7 1453 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
PHF20-214ENST00000495338 NUTM2BA6NNL0 878 aaPredicted RBP13.5□□□□□ -0.25
PHF20-214ENST00000495338 NUTM2EB1AL46 878 aaPredicted RBP13.5□□□□□ -0.25
PHF20-214ENST00000495338 NUTM2DQ5VT03 806 aaPredicted RBP13.5□□□□□ -0.25
PHF20-214ENST00000495338 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
PHF20-214ENST00000495338 NUTM2AQ8IVF1 878 aaPredicted RBP13.5□□□□□ -0.25
PHF20-214ENST00000495338 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
PHF20-214ENST00000495338 DSG3P32926 999 aa13.49□□□□□ -0.25
PHF20-214ENST00000495338 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
PHF20-214ENST00000495338 KCNA6P17658 529 aa13.48□□□□□ -0.25
PHF20-214ENST00000495338 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
PHF20-214ENST00000495338 TET3O43151 1660 aa13.47□□□□□ -0.25
PHF20-214ENST00000495338 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
PHF20-214ENST00000495338 ABCC3O15438 1527 aa13.47□□□□□ -0.25
PHF20-214ENST00000495338 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
PHF20-214ENST00000495338 AHDC1Q5TGY3 1603 aaPredicted RBP13.46□□□□□ -0.26
PHF20-214ENST00000495338 NWD1Q149M9 1564 aa13.45□□□□□ -0.26
PHF20-214ENST00000495338 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
PHF20-214ENST00000495338 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms