RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 FAM135AQ9P2D6 1515 aa9.21□□□□□ -0.94
SEC13-219ENST00000492602 DEPDC5O75140 1603 aa9.2□□□□□ -0.94
SEC13-219ENST00000492602 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
SEC13-219ENST00000492602 UGGT1Q9NYU2 1555 aa9.2□□□□□ -0.94
SEC13-219ENST00000492602 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
SEC13-219ENST00000492602 CLIP1P30622 1438 aa9.19□□□□□ -0.94
SEC13-219ENST00000492602 TROQ12816 1431 aaPredicted RBP9.19□□□□□ -0.94
SEC13-219ENST00000492602 A2MP01023 1474 aa9.19□□□□□ -0.94
SEC13-219ENST00000492602 SETBP1Q9Y6X0 1596 aa9.19□□□□□ -0.94
SEC13-219ENST00000492602 ROBO1Q9Y6N7 1651 aa9.19□□□□□ -0.94
SEC13-219ENST00000492602 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
SEC13-219ENST00000492602 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
SEC13-219ENST00000492602 NUTM2DQ5VT03 806 aaPredicted RBP9.18□□□□□ -0.94
SEC13-219ENST00000492602 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
SEC13-219ENST00000492602 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
SEC13-219ENST00000492602 CDC42BPBQ9Y5S2 1711 aa9.18□□□□□ -0.94
SEC13-219ENST00000492602 LRP6O75581 1613 aa9.17□□□□□ -0.94
SEC13-219ENST00000492602 CDK12Q9NYV4 1490 aaPredicted RBP9.17□□□□□ -0.94
SEC13-219ENST00000492602 PLXNC1O60486 1568 aa9.16□□□□□ -0.94
SEC13-219ENST00000492602 MIA2Q96PC5 1412 aa9.16□□□□□ -0.94
SEC13-219ENST00000492602 SPATA31A6Q5VVP1 1343 aa9.16□□□□□ -0.94
SEC13-219ENST00000492602 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
SEC13-219ENST00000492602 NLRP1Q9C000 1473 aa9.15□□□□□ -0.94
SEC13-219ENST00000492602 TMEM94Q12767 1356 aa9.15□□□□□ -0.94
SEC13-219ENST00000492602 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.95
SEC13-219ENST00000492602 PZPP20742 1482 aa9.15□□□□□ -0.95
SEC13-219ENST00000492602 XIRP1Q702N8 1843 aaKnown RBP9.15□□□□□ -0.95
SEC13-219ENST00000492602 ATP7AQ04656 1500 aa9.14□□□□□ -0.95
SEC13-219ENST00000492602 PHLPP1O60346 1717 aa9.14□□□□□ -0.95
SEC13-219ENST00000492602 PREX2Q70Z35 1606 aa9.13□□□□□ -0.95
SEC13-219ENST00000492602 IFFO2Q5TF58 517 aa9.13□□□□□ -0.95
SEC13-219ENST00000492602 CSRNP3Q8WYN3 585 aa9.13□□□□□ -0.95
SEC13-219ENST00000492602 LRRC9Q6ZRR7 1453 aa9.13□□□□□ -0.95
SEC13-219ENST00000492602 RGS12O14924 1447 aa9.13□□□□□ -0.95
SEC13-219ENST00000492602 WASHC2CQ9Y4E1 1318 aa9.12□□□□□ -0.95
SEC13-219ENST00000492602 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
SEC13-219ENST00000492602 SLAIN2Q9P270 581 aa9.12□□□□□ -0.95
SEC13-219ENST00000492602 SYCP2Q9BX26 1530 aa9.11□□□□□ -0.95
SEC13-219ENST00000492602 AFF2P51816 1311 aa9.11□□□□□ -0.95
SEC13-219ENST00000492602 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
SEC13-219ENST00000492602 RBM6P78332 1123 aaKnown RBP9.11□□□□□ -0.95
SEC13-219ENST00000492602 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
SEC13-219ENST00000492602 ATAD2Q6PL18 1390 aa9.11□□□□□ -0.95
SEC13-219ENST00000492602 KIF3BO15066 747 aa9.1□□□□□ -0.95
SEC13-219ENST00000492602 LTKP29376 864 aa9.1□□□□□ -0.95
SEC13-219ENST00000492602 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
SEC13-219ENST00000492602 FGD6Q6ZV73 1430 aa9.1□□□□□ -0.95
SEC13-219ENST00000492602 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
SEC13-219ENST00000492602 FMN1Q68DA7 1419 aa9.09□□□□□ -0.95
SEC13-219ENST00000492602 MSH6P52701 1360 aa9.09□□□□□ -0.95
SEC13-219ENST00000492602 INO80Q9ULG1 1556 aaPredicted RBP9.08□□□□□ -0.96
SEC13-219ENST00000492602 KCNA6P17658 529 aa9.08□□□□□ -0.96
SEC13-219ENST00000492602 MAP3K1Q13233 1512 aa9.08□□□□□ -0.96
SEC13-219ENST00000492602 COL16A1Q07092 1604 aaPredicted RBP9.08□□□□□ -0.96
SEC13-219ENST00000492602 EID1Q9Y6B2 187 aa9.07□□□□□ -0.96
SEC13-219ENST00000492602 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
SEC13-219ENST00000492602 C8orf37Q96NL8 207 aa9.06□□□□□ -0.96
SEC13-219ENST00000492602 DHX29Q7Z478 1369 aaKnown RBP9.06□□□□□ -0.96
SEC13-219ENST00000492602 ADGBQ8N7X0 1667 aa9.05□□□□□ -0.96
SEC13-219ENST00000492602 YY1P25490 414 aa9.05□□□□□ -0.96
SEC13-219ENST00000492602 CDC42BPAQ5VT25 1732 aa9.05□□□□□ -0.96
SEC13-219ENST00000492602 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
SEC13-219ENST00000492602 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
SEC13-219ENST00000492602 CFDP1Q9UEE9 299 aaPredicted RBP9.04□□□□□ -0.96
SEC13-219ENST00000492602 PRDM15P57071 1507 aaPredicted RBP9.04□□□□□ -0.96
SEC13-219ENST00000492602 SLC26A8Q96RN1 970 aa9.03□□□□□ -0.96
SEC13-219ENST00000492602 PLEKHH2Q8IVE3 1493 aa9.02□□□□□ -0.96
SEC13-219ENST00000492602 GPATCH8Q9UKJ3 1502 aaKnown RBP9.02□□□□□ -0.97
SEC13-219ENST00000492602 SHPRHQ149N8 1683 aa9.02□□□□□ -0.97
SEC13-219ENST00000492602 NCOA2Q15596 1464 aa9.02□□□□□ -0.97
SEC13-219ENST00000492602 ARHGAP23Q9P227 1491 aa9.02□□□□□ -0.97
SEC13-219ENST00000492602 TIAM1Q13009 1591 aa9.01□□□□□ -0.97
SEC13-219ENST00000492602 LRP5O75197 1615 aa9.01□□□□□ -0.97
SEC13-219ENST00000492602 SLIT1O75093 1534 aa9□□□□□ -0.97
SEC13-219ENST00000492602 UBR1Q8IWV7 1749 aa9□□□□□ -0.97
SEC13-219ENST00000492602 LRRIQ1Q96JM4 1722 aa9□□□□□ -0.97
SEC13-219ENST00000492602 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
SEC13-219ENST00000492602 ERVK-7P63135 1459 aa8.99□□□□□ -0.97
SEC13-219ENST00000492602 ABCC3O15438 1527 aa8.99□□□□□ -0.97
SEC13-219ENST00000492602 AHDC1Q5TGY3 1603 aaPredicted RBP8.98□□□□□ -0.97
SEC13-219ENST00000492602 RTEL1-TNFRSF6BF6WH68 1400 aa8.98□□□□□ -0.97
SEC13-219ENST00000492602 NKTRP30414 1462 aaKnown RBP8.98□□□□□ -0.97
SEC13-219ENST00000492602 PSDA5PKW4 1024 aaPredicted RBP8.98□□□□□ -0.97
SEC13-219ENST00000492602 DEFB132Q7Z7B7 95 aa8.98□□□□□ -0.97
SEC13-219ENST00000492602 BCANQ96GW7 911 aa8.98□□□□□ -0.97
SEC13-219ENST00000492602 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
SEC13-219ENST00000492602 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
SEC13-219ENST00000492602 ARHGAP35Q9NRY4 1499 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 EP400Q96L91 3159 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 ADAMTS2O95450 1211 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 EHMT2Q96KQ7 1210 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 USP21Q9UK80 565 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 TRPC5Q9UL62 973 aaPredicted RBP8.97□□□□□ -0.97
SEC13-219ENST00000492602 NWD1Q149M9 1564 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 TMEM2Q9UHN6 1383 aa8.97□□□□□ -0.97
SEC13-219ENST00000492602 DIP2AQ14689 1571 aa8.96□□□□□ -0.97
SEC13-219ENST00000492602 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.98
SEC13-219ENST00000492602 ATF3P18847 181 aa8.96□□□□□ -0.98
SEC13-219ENST00000492602 HRCP23327 699 aa8.96□□□□□ -0.98
SEC13-219ENST00000492602 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms