RNA–Protein interactions for RNA: ENST00000491519.4

SATB1-216, Transcript of SATB homeobox 1, humanhuman

TSL 2 BASIC

Gene SATB1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-216ENST00000491519 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
SATB1-216ENST00000491519 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
SATB1-216ENST00000491519 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
SATB1-216ENST00000491519 BCAMP50895 628 aa11.35□□□□□ -0.59
SATB1-216ENST00000491519 LAPTM4BQ86VI4 370 aa11.34□□□□□ -0.59
SATB1-216ENST00000491519 ANKK1Q8NFD2 765 aa11.34□□□□□ -0.59
SATB1-216ENST00000491519 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
SATB1-216ENST00000491519 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
SATB1-216ENST00000491519 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
SATB1-216ENST00000491519 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
SATB1-216ENST00000491519 KIAA1468Q9P260 1216 aa11.31□□□□□ -0.6
SATB1-216ENST00000491519 DPYSL4O14531 572 aa11.3□□□□□ -0.6
SATB1-216ENST00000491519 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
SATB1-216ENST00000491519 EPAS1Q99814 870 aa11.29□□□□□ -0.6
SATB1-216ENST00000491519 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
SATB1-216ENST00000491519 SEPT9Q9UHD8 586 aaPredicted RBP11.28□□□□□ -0.6
SATB1-216ENST00000491519 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
SATB1-216ENST00000491519 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
SATB1-216ENST00000491519 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
SATB1-216ENST00000491519 DDX12PQ92771 950 aa11.22□□□□□ -0.61
SATB1-216ENST00000491519 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
SATB1-216ENST00000491519 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.61
SATB1-216ENST00000491519 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
SATB1-216ENST00000491519 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
SATB1-216ENST00000491519 PDIA6Q15084 440 aa11.19□□□□□ -0.62
SATB1-216ENST00000491519 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
SATB1-216ENST00000491519 KCNC4Q03721 635 aa11.17□□□□□ -0.62
SATB1-216ENST00000491519 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
SATB1-216ENST00000491519 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.16□□□□□ -0.62
SATB1-216ENST00000491519 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
SATB1-216ENST00000491519 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
SATB1-216ENST00000491519 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
SATB1-216ENST00000491519 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
SATB1-216ENST00000491519 NBR1Q14596 966 aa11.14□□□□□ -0.63
SATB1-216ENST00000491519 LRCH3Q96II8 777 aa11.13□□□□□ -0.63
SATB1-216ENST00000491519 LCE2BO14633 110 aa11.12□□□□□ -0.63
SATB1-216ENST00000491519 MAP3K7O43318 606 aa11.1□□□□□ -0.63
SATB1-216ENST00000491519 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
SATB1-216ENST00000491519 SPDYE16A6NNV3 312 aaPredicted RBP11.07□□□□□ -0.64
SATB1-216ENST00000491519 SMAPO00193 183 aa11.07□□□□□ -0.64
SATB1-216ENST00000491519 PACS2Q86VP3 889 aa11.07□□□□□ -0.64
SATB1-216ENST00000491519 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
SATB1-216ENST00000491519 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
SATB1-216ENST00000491519 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
SATB1-216ENST00000491519 PRSS12P56730 875 aa11.05□□□□□ -0.64
SATB1-216ENST00000491519 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
SATB1-216ENST00000491519 Q6ZNB5 142 aa11.04□□□□□ -0.64
SATB1-216ENST00000491519 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
SATB1-216ENST00000491519 PPP4CP60510 307 aa11.01□□□□□ -0.65
SATB1-216ENST00000491519 CERKQ8TCT0 537 aa11□□□□□ -0.65
SATB1-216ENST00000491519 TATDN2Q93075 761 aa11□□□□□ -0.65
SATB1-216ENST00000491519 OSBPP22059 807 aa10.99□□□□□ -0.65
SATB1-216ENST00000491519 E2F4Q16254 413 aa10.99□□□□□ -0.65
SATB1-216ENST00000491519 MTRQ99707 1265 aa10.99□□□□□ -0.65
SATB1-216ENST00000491519 NBPF26B4DH59 902 aa10.97□□□□□ -0.65
SATB1-216ENST00000491519 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
SATB1-216ENST00000491519 GRXCR2A6NFK2 248 aa10.96□□□□□ -0.65
SATB1-216ENST00000491519 TTC13Q8NBP0 860 aa10.96□□□□□ -0.65
SATB1-216ENST00000491519 ZNF516Q92618 1163 aa10.96□□□□□ -0.65
SATB1-216ENST00000491519 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
SATB1-216ENST00000491519 APLP1P51693 650 aa10.95□□□□□ -0.66
SATB1-216ENST00000491519 LAPTM4AQ15012 233 aa10.95□□□□□ -0.66
SATB1-216ENST00000491519 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
SATB1-216ENST00000491519 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
SATB1-216ENST00000491519 NPDC1Q9NQX5 325 aaPredicted RBP10.94□□□□□ -0.66
SATB1-216ENST00000491519 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
SATB1-216ENST00000491519 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
SATB1-216ENST00000491519 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
SATB1-216ENST00000491519 GFRA3O60609 400 aa10.92□□□□□ -0.66
SATB1-216ENST00000491519 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
SATB1-216ENST00000491519 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
SATB1-216ENST00000491519 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
SATB1-216ENST00000491519 NRG2O14511 850 aaPredicted RBP10.87□□□□□ -0.67
SATB1-216ENST00000491519 PADI6Q6TGC4 694 aa10.87□□□□□ -0.67
SATB1-216ENST00000491519 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
SATB1-216ENST00000491519 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
SATB1-216ENST00000491519 RNF40O75150 1001 aa10.84□□□□□ -0.67
SATB1-216ENST00000491519 EYA1Q99502 592 aa10.83□□□□□ -0.68
SATB1-216ENST00000491519 COPS2P61201 443 aa10.8□□□□□ -0.68
SATB1-216ENST00000491519 EMID1Q96A84 441 aaPredicted RBP10.8□□□□□ -0.68
SATB1-216ENST00000491519 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
SATB1-216ENST00000491519 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.8□□□□□ -0.68
SATB1-216ENST00000491519 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
SATB1-216ENST00000491519 SLF2Q8IX21 1173 aa10.79□□□□□ -0.68
SATB1-216ENST00000491519 ZPR1O75312 459 aa10.78□□□□□ -0.68
SATB1-216ENST00000491519 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
SATB1-216ENST00000491519 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
SATB1-216ENST00000491519 CFAP44Q96MT7 982 aa10.77□□□□□ -0.69
SATB1-216ENST00000491519 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
SATB1-216ENST00000491519 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
SATB1-216ENST00000491519 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
SATB1-216ENST00000491519 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
SATB1-216ENST00000491519 BLOC1S3Q6QNY0 202 aa10.72□□□□□ -0.69
SATB1-216ENST00000491519 RNF223E7ERA6 249 aa10.71□□□□□ -0.69
SATB1-216ENST00000491519 PTGDRQ13258 359 aa10.71□□□□□ -0.69
SATB1-216ENST00000491519 TLL1O43897 1013 aa10.7□□□□□ -0.7
SATB1-216ENST00000491519 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
SATB1-216ENST00000491519 GGCXP38435 758 aa10.69□□□□□ -0.7
SATB1-216ENST00000491519 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
SATB1-216ENST00000491519 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms