RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
ABCB1-208ENST00000491360 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
ABCB1-208ENST00000491360 BCAMP50895 628 aa9.38□□□□□ -0.91
ABCB1-208ENST00000491360 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
ABCB1-208ENST00000491360 COL9A1P20849 921 aa9.37□□□□□ -0.91
ABCB1-208ENST00000491360 KCNC4Q03721 635 aa9.37□□□□□ -0.91
ABCB1-208ENST00000491360 PHF14O94880 888 aa9.36□□□□□ -0.91
ABCB1-208ENST00000491360 MFSD10Q14728 455 aa9.36□□□□□ -0.91
ABCB1-208ENST00000491360 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
ABCB1-208ENST00000491360 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
ABCB1-208ENST00000491360 LAPTM4AQ15012 233 aa9.34□□□□□ -0.91
ABCB1-208ENST00000491360 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
ABCB1-208ENST00000491360 WBP1LQ9NX94 342 aa9.33□□□□□ -0.92
ABCB1-208ENST00000491360 GTPBP6O43824 516 aaPredicted RBP9.32□□□□□ -0.92
ABCB1-208ENST00000491360 EPAS1Q99814 870 aa9.31□□□□□ -0.92
ABCB1-208ENST00000491360 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
ABCB1-208ENST00000491360 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
ABCB1-208ENST00000491360 TSR3Q9UJK0 312 aaKnown RBP9.29□□□□□ -0.92
ABCB1-208ENST00000491360 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
ABCB1-208ENST00000491360 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.28□□□□□ -0.92
ABCB1-208ENST00000491360 TRIM6-TRIM34B2RNG4 842 aa9.27□□□□□ -0.93
ABCB1-208ENST00000491360 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
ABCB1-208ENST00000491360 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
ABCB1-208ENST00000491360 GFRA3O60609 400 aa9.24□□□□□ -0.93
ABCB1-208ENST00000491360 NISCHQ9Y2I1 1504 aa9.24□□□□□ -0.93
ABCB1-208ENST00000491360 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
ABCB1-208ENST00000491360 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
ABCB1-208ENST00000491360 PPP4CP60510 307 aa9.21□□□□□ -0.94
ABCB1-208ENST00000491360 CAMK2BQ13554 666 aa9.2□□□□□ -0.94
ABCB1-208ENST00000491360 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
ABCB1-208ENST00000491360 DPYSL4O14531 572 aa9.18□□□□□ -0.94
ABCB1-208ENST00000491360 NRG2O14511 850 aaPredicted RBP9.16□□□□□ -0.94
ABCB1-208ENST00000491360 CADPS2Q86UW7 1296 aa9.16□□□□□ -0.94
ABCB1-208ENST00000491360 DDX12PQ92771 950 aa9.16□□□□□ -0.94
ABCB1-208ENST00000491360 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
ABCB1-208ENST00000491360 TJAP1Q5JTD0 557 aa9.15□□□□□ -0.94
ABCB1-208ENST00000491360 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
ABCB1-208ENST00000491360 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
ABCB1-208ENST00000491360 LCE2BO14633 110 aa9.13□□□□□ -0.95
ABCB1-208ENST00000491360 MAP3K7O43318 606 aa9.13□□□□□ -0.95
ABCB1-208ENST00000491360 IL21Q9HBE4 155 aa9.13□□□□□ -0.95
ABCB1-208ENST00000491360 EN1Q05925 392 aaPredicted RBP9.12□□□□□ -0.95
ABCB1-208ENST00000491360 NBR1Q14596 966 aa9.11□□□□□ -0.95
ABCB1-208ENST00000491360 HDGFP51858 240 aaKnown RBP9.1□□□□□ -0.95
ABCB1-208ENST00000491360 PPP1R18Q6NYC8 613 aa9.1□□□□□ -0.95
ABCB1-208ENST00000491360 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
ABCB1-208ENST00000491360 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
ABCB1-208ENST00000491360 MTRQ99707 1265 aa9.1□□□□□ -0.95
ABCB1-208ENST00000491360 PRSS12P56730 875 aa9.09□□□□□ -0.95
ABCB1-208ENST00000491360 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
ABCB1-208ENST00000491360 CDCA7LQ96GN5 454 aa9.09□□□□□ -0.95
ABCB1-208ENST00000491360 DCAF8L2P0C7V8 631 aa9.08□□□□□ -0.96
ABCB1-208ENST00000491360 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
ABCB1-208ENST00000491360 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-208ENST00000491360 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
ABCB1-208ENST00000491360 SMAPO00193 183 aa9.06□□□□□ -0.96
ABCB1-208ENST00000491360 GGCXP38435 758 aa9.05□□□□□ -0.96
ABCB1-208ENST00000491360 PDIA6Q15084 440 aa9.05□□□□□ -0.96
ABCB1-208ENST00000491360 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
ABCB1-208ENST00000491360 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
ABCB1-208ENST00000491360 TATDN2Q93075 761 aa9.05□□□□□ -0.96
ABCB1-208ENST00000491360 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
ABCB1-208ENST00000491360 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
ABCB1-208ENST00000491360 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
ABCB1-208ENST00000491360 FAM198AQ9UFP1 575 aa9.01□□□□□ -0.97
ABCB1-208ENST00000491360 RNF40O75150 1001 aa9□□□□□ -0.97
ABCB1-208ENST00000491360 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
ABCB1-208ENST00000491360 APLP1P51693 650 aa8.99□□□□□ -0.97
ABCB1-208ENST00000491360 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
ABCB1-208ENST00000491360 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
ABCB1-208ENST00000491360 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
ABCB1-208ENST00000491360 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
ABCB1-208ENST00000491360 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
ABCB1-208ENST00000491360 C3orf80F5H4A9 247 aa8.96□□□□□ -0.98
ABCB1-208ENST00000491360 SLF2Q8IX21 1173 aa8.96□□□□□ -0.98
ABCB1-208ENST00000491360 ZNF775Q96BV0 537 aaPredicted RBP8.94□□□□□ -0.98
ABCB1-208ENST00000491360 COPS2P61201 443 aa8.93□□□□□ -0.98
ABCB1-208ENST00000491360 E2F4Q16254 413 aa8.93□□□□□ -0.98
ABCB1-208ENST00000491360 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
ABCB1-208ENST00000491360 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
ABCB1-208ENST00000491360 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
ABCB1-208ENST00000491360 ZPR1O75312 459 aa8.91□□□□□ -0.98
ABCB1-208ENST00000491360 SWT1Q5T5J6 900 aaKnown RBP8.91□□□□□ -0.98
ABCB1-208ENST00000491360 OSBPP22059 807 aa8.9□□□□□ -0.98
ABCB1-208ENST00000491360 SLC19A1P41440 591 aa8.9□□□□□ -0.98
ABCB1-208ENST00000491360 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
ABCB1-208ENST00000491360 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
ABCB1-208ENST00000491360 DGAT1O75907 488 aa8.88□□□□□ -0.99
ABCB1-208ENST00000491360 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
ABCB1-208ENST00000491360 CDHR5Q9HBB8 845 aa8.88□□□□□ -0.99
ABCB1-208ENST00000491360 WDR70Q9NW82 654 aa8.88□□□□□ -0.99
ABCB1-208ENST00000491360 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
ABCB1-208ENST00000491360 RNF223E7ERA6 249 aa8.85□□□□□ -0.99
ABCB1-208ENST00000491360 MYT1Q01538 1121 aa8.85□□□□□ -0.99
ABCB1-208ENST00000491360 PADI6Q6TGC4 694 aa8.85□□□□□ -0.99
ABCB1-208ENST00000491360 TRIM67Q6ZTA4 783 aa8.85□□□□□ -0.99
ABCB1-208ENST00000491360 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
ABCB1-208ENST00000491360 ZNF598Q86UK7 904 aaKnown RBP8.84□□□□□ -0.99
ABCB1-208ENST00000491360 PRR20EP86478 221 aa8.83□□□□□ -1
ABCB1-208ENST00000491360 PRR20CP86479 221 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms