RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 A0A0G2JS52 829 aa9.42□□□□□ -0.9
CCDC93-209ENST00000488908 COL9A1P20849 921 aa9.42□□□□□ -0.9
CCDC93-209ENST00000488908 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
CCDC93-209ENST00000488908 LAPTM4BQ86VI4 370 aa9.4□□□□□ -0.9
CCDC93-209ENST00000488908 EPAS1Q99814 870 aa9.39□□□□□ -0.91
CCDC93-209ENST00000488908 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
CCDC93-209ENST00000488908 ONECUT3O60422 494 aaPredicted RBP9.37□□□□□ -0.91
CCDC93-209ENST00000488908 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
CCDC93-209ENST00000488908 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
CCDC93-209ENST00000488908 DPYSL4O14531 572 aa9.36□□□□□ -0.91
CCDC93-209ENST00000488908 BCAMP50895 628 aa9.36□□□□□ -0.91
CCDC93-209ENST00000488908 C6orf132Q5T0Z8 1188 aa9.36□□□□□ -0.91
CCDC93-209ENST00000488908 IRX2Q9BZI1 471 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-209ENST00000488908 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
CCDC93-209ENST00000488908 NYAP1Q6ZVC0 841 aa9.35□□□□□ -0.91
CCDC93-209ENST00000488908 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
CCDC93-209ENST00000488908 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
CCDC93-209ENST00000488908 RBM33Q96EV2 1170 aaKnown RBP9.32□□□□□ -0.92
CCDC93-209ENST00000488908 SEPT9Q9UHD8 586 aaPredicted RBP9.32□□□□□ -0.92
CCDC93-209ENST00000488908 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
CCDC93-209ENST00000488908 DDX12PQ92771 950 aa9.3□□□□□ -0.92
CCDC93-209ENST00000488908 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
CCDC93-209ENST00000488908 KCNC4Q03721 635 aa9.27□□□□□ -0.93
CCDC93-209ENST00000488908 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
CCDC93-209ENST00000488908 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
CCDC93-209ENST00000488908 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
CCDC93-209ENST00000488908 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
CCDC93-209ENST00000488908 NBR1Q14596 966 aa9.26□□□□□ -0.93
CCDC93-209ENST00000488908 TSR3Q9UJK0 312 aaKnown RBP9.26□□□□□ -0.93
CCDC93-209ENST00000488908 MAP3K7O43318 606 aa9.25□□□□□ -0.93
CCDC93-209ENST00000488908 PDIA6Q15084 440 aa9.25□□□□□ -0.93
CCDC93-209ENST00000488908 PACS2Q86VP3 889 aa9.25□□□□□ -0.93
CCDC93-209ENST00000488908 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
CCDC93-209ENST00000488908 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
CCDC93-209ENST00000488908 TSR1Q2NL82 804 aaKnown RBP9.22□□□□□ -0.93
CCDC93-209ENST00000488908 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
CCDC93-209ENST00000488908 PPP4CP60510 307 aa9.19□□□□□ -0.94
CCDC93-209ENST00000488908 SPRYD3Q8NCJ5 442 aa9.19□□□□□ -0.94
CCDC93-209ENST00000488908 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
CCDC93-209ENST00000488908 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
CCDC93-209ENST00000488908 E2F4Q16254 413 aa9.17□□□□□ -0.94
CCDC93-209ENST00000488908 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.17□□□□□ -0.94
CCDC93-209ENST00000488908 PRSS12P56730 875 aa9.16□□□□□ -0.94
CCDC93-209ENST00000488908 Q6ZNB5 142 aa9.16□□□□□ -0.94
CCDC93-209ENST00000488908 SAMD7Q7Z3H4 446 aa9.15□□□□□ -0.94
CCDC93-209ENST00000488908 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
CCDC93-209ENST00000488908 NBPF26B4DH59 902 aa9.14□□□□□ -0.95
CCDC93-209ENST00000488908 SMAPO00193 183 aa9.14□□□□□ -0.95
CCDC93-209ENST00000488908 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
CCDC93-209ENST00000488908 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-209ENST00000488908 TATDN2Q93075 761 aa9.12□□□□□ -0.95
CCDC93-209ENST00000488908 FAM198AQ9UFP1 575 aa9.12□□□□□ -0.95
CCDC93-209ENST00000488908 HDGFP51858 240 aaKnown RBP9.11□□□□□ -0.95
CCDC93-209ENST00000488908 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
CCDC93-209ENST00000488908 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
CCDC93-209ENST00000488908 PNMA3Q9UL41 463 aa9.11□□□□□ -0.95
CCDC93-209ENST00000488908 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
CCDC93-209ENST00000488908 IL21Q9HBE4 155 aa9.09□□□□□ -0.95
CCDC93-209ENST00000488908 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
CCDC93-209ENST00000488908 MTRQ99707 1265 aa9.08□□□□□ -0.96
CCDC93-209ENST00000488908 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
CCDC93-209ENST00000488908 RNF40O75150 1001 aa9.07□□□□□ -0.96
CCDC93-209ENST00000488908 OSBPP22059 807 aa9.07□□□□□ -0.96
CCDC93-209ENST00000488908 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
CCDC93-209ENST00000488908 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
CCDC93-209ENST00000488908 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
CCDC93-209ENST00000488908 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
CCDC93-209ENST00000488908 CDHR5Q9HBB8 845 aa9.06□□□□□ -0.96
CCDC93-209ENST00000488908 GFRA3O60609 400 aa9.05□□□□□ -0.96
CCDC93-209ENST00000488908 PPP1R18Q6NYC8 613 aa9.04□□□□□ -0.96
CCDC93-209ENST00000488908 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
CCDC93-209ENST00000488908 APLP1P51693 650 aa9.02□□□□□ -0.97
CCDC93-209ENST00000488908 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
CCDC93-209ENST00000488908 SLF2Q8IX21 1173 aa9.01□□□□□ -0.97
CCDC93-209ENST00000488908 ZNF516Q92618 1163 aa9.01□□□□□ -0.97
CCDC93-209ENST00000488908 V9GY48 417 aaPredicted RBP9.01□□□□□ -0.97
CCDC93-209ENST00000488908 SLC4A3P48751 1232 aa9□□□□□ -0.97
CCDC93-209ENST00000488908 PADI6Q6TGC4 694 aa9□□□□□ -0.97
CCDC93-209ENST00000488908 TTC13Q8NBP0 860 aa9□□□□□ -0.97
CCDC93-209ENST00000488908 EIF4ENIF1Q9NRA8 985 aaKnown RBP9□□□□□ -0.97
CCDC93-209ENST00000488908 NRG2O14511 850 aaPredicted RBP8.99□□□□□ -0.97
CCDC93-209ENST00000488908 SWT1Q5T5J6 900 aaKnown RBP8.99□□□□□ -0.97
CCDC93-209ENST00000488908 TRAF7Q6Q0C0 670 aa8.99□□□□□ -0.97
CCDC93-209ENST00000488908 GGCXP38435 758 aa8.98□□□□□ -0.97
CCDC93-209ENST00000488908 NPDC1Q9NQX5 325 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-209ENST00000488908 LCE2BO14633 110 aa8.95□□□□□ -0.98
CCDC93-209ENST00000488908 COPS2P61201 443 aa8.95□□□□□ -0.98
CCDC93-209ENST00000488908 NKX2-3Q8TAU0 364 aa8.95□□□□□ -0.98
CCDC93-209ENST00000488908 PRR14Q9BWN1 585 aa8.95□□□□□ -0.98
CCDC93-209ENST00000488908 EYA1Q99502 592 aa8.94□□□□□ -0.98
CCDC93-209ENST00000488908 TMUB1Q9BVT8 246 aa8.93□□□□□ -0.98
CCDC93-209ENST00000488908 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
CCDC93-209ENST00000488908 ZPR1O75312 459 aa8.91□□□□□ -0.98
CCDC93-209ENST00000488908 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.98
CCDC93-209ENST00000488908 PCDHB3Q9Y5E6 796 aa8.9□□□□□ -0.98
CCDC93-209ENST00000488908 RTN4Q9NQC3 1192 aaKnown RBP8.89□□□□□ -0.99
CCDC93-209ENST00000488908 DNAJB2P25686 324 aa8.88□□□□□ -0.99
CCDC93-209ENST00000488908 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-209ENST00000488908 PTGDRQ13258 359 aa8.87□□□□□ -0.99
CCDC93-209ENST00000488908 RBM46Q8TBY0 533 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms