RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 MS4A1P11836 297 aa12.63□□□□□ -0.39
ZEB1-206ENST00000488625 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
ZEB1-206ENST00000488625 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
ZEB1-206ENST00000488625 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
ZEB1-206ENST00000488625 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
ZEB1-206ENST00000488625 POGKQ9P215 609 aa12.61□□□□□ -0.39
ZEB1-206ENST00000488625 SPAG9O60271 1321 aaKnown RBP12.6□□□□□ -0.39
ZEB1-206ENST00000488625 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
ZEB1-206ENST00000488625 EID1Q9Y6B2 187 aa12.6□□□□□ -0.39
ZEB1-206ENST00000488625 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
ZEB1-206ENST00000488625 TRIM44Q96DX7 344 aaPredicted RBP12.59□□□□□ -0.39
ZEB1-206ENST00000488625 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
ZEB1-206ENST00000488625 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.39
ZEB1-206ENST00000488625 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.39
ZEB1-206ENST00000488625 CENPQQ7L2Z9 268 aaPredicted RBP12.58□□□□□ -0.4
ZEB1-206ENST00000488625 PNNQ9H307 717 aaKnown RBP12.58□□□□□ -0.4
ZEB1-206ENST00000488625 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
ZEB1-206ENST00000488625 GGT6Q6P531 493 aa12.57□□□□□ -0.4
ZEB1-206ENST00000488625 PRG4Q92954 1404 aaPredicted RBP12.57□□□□□ -0.4
ZEB1-206ENST00000488625 HSCBQ8IWL3 235 aa12.57□□□□□ -0.4
ZEB1-206ENST00000488625 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
ZEB1-206ENST00000488625 SAFB2Q14151 953 aaKnown RBP eCLIP12.57□□□□□ -0.4
ZEB1-206ENST00000488625 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
ZEB1-206ENST00000488625 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
ZEB1-206ENST00000488625 PMFBP1Q8TBY8 1022 aa12.56□□□□□ -0.4
ZEB1-206ENST00000488625 CENPJQ9HC77 1338 aaPredicted RBP12.56□□□□□ -0.4
ZEB1-206ENST00000488625 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
ZEB1-206ENST00000488625 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
ZEB1-206ENST00000488625 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
ZEB1-206ENST00000488625 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
ZEB1-206ENST00000488625 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
ZEB1-206ENST00000488625 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
ZEB1-206ENST00000488625 CAMSAP2Q08AD1 1489 aa12.55□□□□□ -0.4
ZEB1-206ENST00000488625 RWDD1Q9H446 243 aaPredicted RBP12.54□□□□□ -0.4
ZEB1-206ENST00000488625 KIF3BO15066 747 aa12.54□□□□□ -0.4
ZEB1-206ENST00000488625 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
ZEB1-206ENST00000488625 ARHGAP5Q13017 1502 aa12.54□□□□□ -0.4
ZEB1-206ENST00000488625 UGGT2Q9NYU1 1516 aa12.54□□□□□ -0.4
ZEB1-206ENST00000488625 TROQ12816 1431 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 SLC4A3P48751 1232 aa12.53□□□□□ -0.4
ZEB1-206ENST00000488625 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
ZEB1-206ENST00000488625 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
ZEB1-206ENST00000488625 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
ZEB1-206ENST00000488625 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-206ENST00000488625 ABCC5O15440 1437 aa12.52□□□□□ -0.41
ZEB1-206ENST00000488625 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
ZEB1-206ENST00000488625 STK26Q9P289 416 aa12.52□□□□□ -0.41
ZEB1-206ENST00000488625 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
ZEB1-206ENST00000488625 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
ZEB1-206ENST00000488625 E9PSI1 815 aa12.5□□□□□ -0.41
ZEB1-206ENST00000488625 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
ZEB1-206ENST00000488625 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
ZEB1-206ENST00000488625 MSH5O43196 834 aa12.5□□□□□ -0.41
ZEB1-206ENST00000488625 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
ZEB1-206ENST00000488625 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
ZEB1-206ENST00000488625 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
ZEB1-206ENST00000488625 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
ZEB1-206ENST00000488625 MFAP1P55081 439 aaKnown RBP12.48□□□□□ -0.41
ZEB1-206ENST00000488625 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
ZEB1-206ENST00000488625 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
ZEB1-206ENST00000488625 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-206ENST00000488625 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-206ENST00000488625 CLUAP1Q96AJ1 413 aa12.47□□□□□ -0.41
ZEB1-206ENST00000488625 KIF14Q15058 1648 aa12.47□□□□□ -0.41
ZEB1-206ENST00000488625 IPO8O15397 1037 aaKnown RBP12.47□□□□□ -0.41
ZEB1-206ENST00000488625 TRAK1Q9UPV9 953 aa12.47□□□□□ -0.41
ZEB1-206ENST00000488625 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-206ENST00000488625 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.41
ZEB1-206ENST00000488625 A0A0G2JS52 829 aa12.46□□□□□ -0.41
ZEB1-206ENST00000488625 APAF1O14727 1248 aa12.46□□□□□ -0.41
ZEB1-206ENST00000488625 GSE1Q14687 1217 aa12.46□□□□□ -0.42
ZEB1-206ENST00000488625 ADAMTS8Q9UP79 889 aa12.45□□□□□ -0.42
ZEB1-206ENST00000488625 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
ZEB1-206ENST00000488625 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
ZEB1-206ENST00000488625 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
ZEB1-206ENST00000488625 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
ZEB1-206ENST00000488625 GZF1Q9H116 711 aaPredicted RBP12.45□□□□□ -0.42
ZEB1-206ENST00000488625 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.44□□□□□ -0.42
ZEB1-206ENST00000488625 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
ZEB1-206ENST00000488625 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
ZEB1-206ENST00000488625 RAPGEF6Q8TEU7 1601 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 ITSN2Q9NZM3 1697 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
ZEB1-206ENST00000488625 PPP2R1AP30153 589 aa12.42□□□□□ -0.42
ZEB1-206ENST00000488625 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
ZEB1-206ENST00000488625 TPRNQ4KMQ1 711 aa12.42□□□□□ -0.42
ZEB1-206ENST00000488625 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
ZEB1-206ENST00000488625 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
ZEB1-206ENST00000488625 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
ZEB1-206ENST00000488625 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
ZEB1-206ENST00000488625 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms