RNA–Protein interactions for RNA: ENST00000487210.5

PLCB1-208, Transcript of phospholipase C beta 1, humanhuman

TSL 1 (best)

Gene PLCB1, Length 4,781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLCB1-208ENST00000487210 DNAJC2Q99543 621 aaKnown RBP6.29□□□□□ -1.4
PLCB1-208ENST00000487210 TMED8Q6PL24 325 aaPredicted RBP6.29□□□□□ -1.4
PLCB1-208ENST00000487210 ZSCAN30Q86W11 494 aa6.29□□□□□ -1.4
PLCB1-208ENST00000487210 SPRYD3Q8NCJ5 442 aa6.29□□□□□ -1.4
PLCB1-208ENST00000487210 TRAK2O60296 914 aa6.28□□□□□ -1.4
PLCB1-208ENST00000487210 FAM161AQ3B820 660 aa6.28□□□□□ -1.4
PLCB1-208ENST00000487210 ZBTB7CA1YPR0 619 aa6.28□□□□□ -1.4
PLCB1-208ENST00000487210 RRP1P56182 461 aaKnown RBP6.28□□□□□ -1.4
PLCB1-208ENST00000487210 XPCQ01831 940 aaPredicted RBP6.28□□□□□ -1.4
PLCB1-208ENST00000487210 SENP3Q9H4L4 574 aaPredicted RBP6.28□□□□□ -1.4
PLCB1-208ENST00000487210 SOX12O15370 315 aa6.27□□□□□ -1.4
PLCB1-208ENST00000487210 SPDYE4A6NLX3 237 aa6.27□□□□□ -1.41
PLCB1-208ENST00000487210 TRIM6-TRIM34B2RNG4 842 aa6.26□□□□□ -1.41
PLCB1-208ENST00000487210 TRIM34Q9BYJ4 488 aa6.26□□□□□ -1.41
PLCB1-208ENST00000487210 MCM4P33991 863 aa6.26□□□□□ -1.41
PLCB1-208ENST00000487210 C8orf34Q49A92 452 aa6.26□□□□□ -1.41
PLCB1-208ENST00000487210 PRKRIP1Q9H875 184 aaPredicted RBP6.26□□□□□ -1.41
PLCB1-208ENST00000487210 MAPKBP1O60336 1514 aa6.26□□□□□ -1.41
PLCB1-208ENST00000487210 ATP2B3Q16720 1220 aa6.25□□□□□ -1.41
PLCB1-208ENST00000487210 RSF1Q96T23 1441 aaPredicted RBP6.25□□□□□ -1.41
PLCB1-208ENST00000487210 RAB3GAP2Q9H2M9 1393 aa6.25□□□□□ -1.41
PLCB1-208ENST00000487210 PTMSP20962 102 aa6.25□□□□□ -1.41
PLCB1-208ENST00000487210 ERCC6Q03468 1493 aa6.25□□□□□ -1.41
PLCB1-208ENST00000487210 PSEN1P49768 467 aa6.25□□□□□ -1.41
PLCB1-208ENST00000487210 CCDC173Q0VFZ6 552 aa6.25□□□□□ -1.41
PLCB1-208ENST00000487210 MMP14P50281 582 aa6.24□□□□□ -1.41
PLCB1-208ENST00000487210 JARID2Q92833 1246 aaPredicted RBP6.24□□□□□ -1.41
PLCB1-208ENST00000487210 CLIP1P30622 1438 aa6.24□□□□□ -1.41
PLCB1-208ENST00000487210 PTMAP06454 111 aaKnown RBP6.24□□□□□ -1.41
PLCB1-208ENST00000487210 PRR29P0C7W0 189 aa6.24□□□□□ -1.41
PLCB1-208ENST00000487210 CC2D1BQ5T0F9 858 aaKnown RBP6.24□□□□□ -1.41
PLCB1-208ENST00000487210 SASS6Q6UVJ0 657 aa6.24□□□□□ -1.41
PLCB1-208ENST00000487210 EP400NLQ6ZTU2 488 aa6.24□□□□□ -1.41
PLCB1-208ENST00000487210 TSC1Q92574 1164 aa6.23□□□□□ -1.41
PLCB1-208ENST00000487210 ZNF622Q969S3 477 aaKnown RBP eCLIP6.23□□□□□ -1.41
PLCB1-208ENST00000487210 PLIN1O60240 522 aa6.23□□□□□ -1.41
PLCB1-208ENST00000487210 AXDND1Q5T1B0 1012 aaPredicted RBP6.23□□□□□ -1.41
PLCB1-208ENST00000487210 RCAN3Q9UKA8 241 aa6.23□□□□□ -1.41
PLCB1-208ENST00000487210 ABCC8Q09428 1581 aa6.23□□□□□ -1.41
PLCB1-208ENST00000487210 LOC102724159A0A0B4J2E5 919 aa6.23□□□□□ -1.41
PLCB1-208ENST00000487210 PWP2Q15269 919 aaKnown RBP6.23□□□□□ -1.41
PLCB1-208ENST00000487210 URB2Q14146 1524 aaKnown RBP6.23□□□□□ -1.41
PLCB1-208ENST00000487210 SOGA1O94964 1423 aa6.23□□□□□ -1.41
PLCB1-208ENST00000487210 GAS2L3Q86XJ1 694 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 CFTRP13569 1480 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 TNNT3P45378 269 aaPredicted RBP6.22□□□□□ -1.41
PLCB1-208ENST00000487210 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
PLCB1-208ENST00000487210 MLECQ14165 292 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 TRERF1Q96PN7 1200 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 VPS8Q8N3P4 1428 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 MRC2Q9UBG0 1479 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 CSPP1Q1MSJ5 1256 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 FAM43BQ6ZT52 329 aaPredicted RBP6.22□□□□□ -1.41
PLCB1-208ENST00000487210 PANK3Q9H999 370 aa6.22□□□□□ -1.41
PLCB1-208ENST00000487210 ISY1Q9ULR0 285 aaKnown RBP6.22□□□□□ -1.41
PLCB1-208ENST00000487210 TONSLQ96HA7 1378 aa6.21□□□□□ -1.41
PLCB1-208ENST00000487210 FAM177BA6PVY3 158 aa6.21□□□□□ -1.41
PLCB1-208ENST00000487210 SLC20A2Q08357 652 aa6.21□□□□□ -1.41
PLCB1-208ENST00000487210 KTN1Q86UP2 1357 aaKnown RBP6.21□□□□□ -1.41
PLCB1-208ENST00000487210 TIGD1Q96MW7 591 aa6.21□□□□□ -1.42
PLCB1-208ENST00000487210 CRBNQ96SW2 442 aa6.21□□□□□ -1.42
PLCB1-208ENST00000487210 ANTXR1Q9H6X2 564 aa6.21□□□□□ -1.42
PLCB1-208ENST00000487210 RALBP1Q15311 655 aa6.21□□□□□ -1.42
PLCB1-208ENST00000487210 NBPF1Q3BBV0 1214 aa6.21□□□□□ -1.42
PLCB1-208ENST00000487210 CADPSQ9ULU8 1353 aa6.2□□□□□ -1.42
PLCB1-208ENST00000487210 CCDC66A2RUB6 948 aa6.2□□□□□ -1.42
PLCB1-208ENST00000487210 KANK4Q5T7N3 995 aaPredicted RBP6.2□□□□□ -1.42
PLCB1-208ENST00000487210 GOLGA3Q08378 1498 aa6.2□□□□□ -1.42
PLCB1-208ENST00000487210 HSPA5P11021 654 aaKnown RBP6.2□□□□□ -1.42
PLCB1-208ENST00000487210 DDX11L8A8MPP1 907 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 GEMIN8Q9NWZ8 242 aaKnown RBP6.19□□□□□ -1.42
PLCB1-208ENST00000487210 ZNF710Q8N1W2 664 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 BANK1Q8NDB2 785 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 PPP1R9BQ96SB3 815 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 CCDC9Q9Y3X0 531 aaKnown RBP6.19□□□□□ -1.42
PLCB1-208ENST00000487210 CEP164Q9UPV0 1460 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 ZNF500O60304 480 aaPredicted RBP6.19□□□□□ -1.42
PLCB1-208ENST00000487210 LMOD3Q0VAK6 560 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 TOP2AP11388 1531 aaKnown RBP6.19□□□□□ -1.42
PLCB1-208ENST00000487210 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 TARBP1Q13395 1621 aaKnown RBP6.19□□□□□ -1.42
PLCB1-208ENST00000487210 CCDC88BA6NC98 1476 aa6.19□□□□□ -1.42
PLCB1-208ENST00000487210 PHLDB1Q86UU1 1377 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 ERICH4A6NGS2 130 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 U2AF2P26368 475 aaKnown RBP eCLIP6.18□□□□□ -1.421e-6■■■□□ 15.7
PLCB1-208ENST00000487210 NOL7Q9UMY1 257 aaKnown RBP6.18□□□□□ -1.42
PLCB1-208ENST00000487210 CAPN2P17655 700 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 PDCL2Q8N4E4 241 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 KIF3AQ9Y496 699 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 UPF2Q9HAU5 1272 aaKnown RBP6.18□□□□□ -1.42
PLCB1-208ENST00000487210 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.18□□□□□ -1.42
PLCB1-208ENST00000487210 RIMBP3CA6NJZ7 1639 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 RIMBP3BA6NNM3 1639 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 RIMBP3Q9UFD9 1639 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 GRIPAP1Q4V328 841 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 CFAP44Q96MT7 982 aa6.18□□□□□ -1.42
PLCB1-208ENST00000487210 CENPQQ7L2Z9 268 aaPredicted RBP6.17□□□□□ -1.42
PLCB1-208ENST00000487210 TBC1D2Q9BYX2 928 aa6.17□□□□□ -1.42
PLCB1-208ENST00000487210 YY1AP1Q9H869 796 aa6.17□□□□□ -1.42
PLCB1-208ENST00000487210 C20orf194Q5TEA3 1177 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms