RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 TPM1P09493 284 aa13.57□□□□□ -0.24
EWSR1-216ENST00000479135 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
EWSR1-216ENST00000479135 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 FLIIQ13045 1269 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 PPP4R2Q9NY27 417 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 H3BQV1 296 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
EWSR1-216ENST00000479135 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
EWSR1-216ENST00000479135 ERICH4A6NGS2 130 aa13.55□□□□□ -0.24
EWSR1-216ENST00000479135 CLGNO14967 610 aa13.55□□□□□ -0.24
EWSR1-216ENST00000479135 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
EWSR1-216ENST00000479135 AXDND1Q5T1B0 1012 aaPredicted RBP13.54□□□□□ -0.24
EWSR1-216ENST00000479135 TAX1BP1Q86VP1 789 aa13.54□□□□□ -0.24
EWSR1-216ENST00000479135 TMX4Q9H1E5 349 aaPredicted RBP13.54□□□□□ -0.24
EWSR1-216ENST00000479135 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
EWSR1-216ENST00000479135 CCDC34Q96HJ3 373 aa13.54□□□□□ -0.24
EWSR1-216ENST00000479135 CDR1P51861 262 aa13.53□□□□□ -0.24
EWSR1-216ENST00000479135 HSP90B2PQ58FF3 399 aa13.53□□□□□ -0.24
EWSR1-216ENST00000479135 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
EWSR1-216ENST00000479135 FAM193AP78312 1265 aa13.52□□□□□ -0.24
EWSR1-216ENST00000479135 KIF3AQ9Y496 699 aa13.52□□□□□ -0.24
EWSR1-216ENST00000479135 E9PSI1 815 aa13.52□□□□□ -0.25
EWSR1-216ENST00000479135 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
EWSR1-216ENST00000479135 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
EWSR1-216ENST00000479135 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
EWSR1-216ENST00000479135 MNS1Q8NEH6 495 aa13.52□□□□□ -0.25
EWSR1-216ENST00000479135 GOLGA6L10A0A0M3HER8 536 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 TTC16Q8NEE8 873 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
EWSR1-216ENST00000479135 PDILTQ8N807 584 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
EWSR1-216ENST00000479135 CWC15Q9P013 229 aaKnown RBP13.5□□□□□ -0.25
EWSR1-216ENST00000479135 SEPT7Q16181 437 aaKnown RBP13.5□□□□□ -0.25
EWSR1-216ENST00000479135 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
EWSR1-216ENST00000479135 PHF14O94880 888 aa13.49□□□□□ -0.25
EWSR1-216ENST00000479135 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
EWSR1-216ENST00000479135 RALBP1Q15311 655 aa13.49□□□□□ -0.25
EWSR1-216ENST00000479135 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
EWSR1-216ENST00000479135 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
EWSR1-216ENST00000479135 PSMD1Q99460 953 aa13.48□□□□□ -0.25
EWSR1-216ENST00000479135 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
EWSR1-216ENST00000479135 ZRSR2Q15696 482 aaKnown RBP13.48□□□□□ -0.25
EWSR1-216ENST00000479135 ITPRIPQ8IWB1 547 aa13.48□□□□□ -0.25
EWSR1-216ENST00000479135 FYB1O15117 783 aa13.47□□□□□ -0.25
EWSR1-216ENST00000479135 LEKR1Q6ZMV7 388 aa13.47□□□□□ -0.25
EWSR1-216ENST00000479135 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
EWSR1-216ENST00000479135 TRIM34Q9BYJ4 488 aa13.46□□□□□ -0.25
EWSR1-216ENST00000479135 DHX16O60231 1041 aaKnown RBP13.46□□□□□ -0.26
EWSR1-216ENST00000479135 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
EWSR1-216ENST00000479135 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
EWSR1-216ENST00000479135 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
EWSR1-216ENST00000479135 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
EWSR1-216ENST00000479135 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
EWSR1-216ENST00000479135 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
EWSR1-216ENST00000479135 PRDM10Q9NQV6 1147 aa13.44□□□□□ -0.26
EWSR1-216ENST00000479135 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
EWSR1-216ENST00000479135 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
EWSR1-216ENST00000479135 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
EWSR1-216ENST00000479135 EPS15P42566 896 aa13.43□□□□□ -0.26
EWSR1-216ENST00000479135 ACBD3Q9H3P7 528 aa13.43□□□□□ -0.26
EWSR1-216ENST00000479135 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
EWSR1-216ENST00000479135 EEA1Q15075 1411 aa13.42□□□□□ -0.26
EWSR1-216ENST00000479135 ARGLU1Q9NWB6 273 aaPredicted RBP13.42□□□□□ -0.26
EWSR1-216ENST00000479135 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
EWSR1-216ENST00000479135 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
EWSR1-216ENST00000479135 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
EWSR1-216ENST00000479135 DZIP1Q86YF9 867 aaKnown RBP13.41□□□□□ -0.26
EWSR1-216ENST00000479135 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
EWSR1-216ENST00000479135 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
EWSR1-216ENST00000479135 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
EWSR1-216ENST00000479135 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
EWSR1-216ENST00000479135 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
EWSR1-216ENST00000479135 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
EWSR1-216ENST00000479135 MPNDQ8N594 471 aa13.39□□□□□ -0.27
EWSR1-216ENST00000479135 CCDC66A2RUB6 948 aa13.39□□□□□ -0.27
EWSR1-216ENST00000479135 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
EWSR1-216ENST00000479135 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
EWSR1-216ENST00000479135 OFD1O75665 1012 aa13.37□□□□□ -0.27
EWSR1-216ENST00000479135 CCDC175P0C221 793 aa13.37□□□□□ -0.27
EWSR1-216ENST00000479135 MSH5O43196 834 aa13.37□□□□□ -0.27
EWSR1-216ENST00000479135 DEF6Q9H4E7 631 aa13.36□□□□□ -0.27
EWSR1-216ENST00000479135 FAM177A1Q8N128 213 aaPredicted RBP13.36□□□□□ -0.27
EWSR1-216ENST00000479135 POGKQ9P215 609 aa13.36□□□□□ -0.27
EWSR1-216ENST00000479135 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
EWSR1-216ENST00000479135 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
EWSR1-216ENST00000479135 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
EWSR1-216ENST00000479135 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
EWSR1-216ENST00000479135 BICD2Q8TD16 824 aa13.35□□□□□ -0.27
EWSR1-216ENST00000479135 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
EWSR1-216ENST00000479135 TMCO5BA8MYB1 307 aa13.35□□□□□ -0.27
EWSR1-216ENST00000479135 MYO6Q9UM54 1294 aa13.35□□□□□ -0.27
EWSR1-216ENST00000479135 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
EWSR1-216ENST00000479135 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms