RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 PHF14O94880 888 aa10.84□□□□□ -0.67
STRADBP1-201ENST00000478954 OSBPP22059 807 aa10.84□□□□□ -0.67
STRADBP1-201ENST00000478954 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
STRADBP1-201ENST00000478954 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
STRADBP1-201ENST00000478954 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
STRADBP1-201ENST00000478954 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
STRADBP1-201ENST00000478954 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
STRADBP1-201ENST00000478954 PPP4R3BQ5MIZ7 849 aa10.79□□□□□ -0.68
STRADBP1-201ENST00000478954 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
STRADBP1-201ENST00000478954 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
STRADBP1-201ENST00000478954 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
STRADBP1-201ENST00000478954 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
STRADBP1-201ENST00000478954 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
STRADBP1-201ENST00000478954 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
STRADBP1-201ENST00000478954 EPAS1Q99814 870 aa10.78□□□□□ -0.68
STRADBP1-201ENST00000478954 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
STRADBP1-201ENST00000478954 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.69
STRADBP1-201ENST00000478954 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
STRADBP1-201ENST00000478954 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
STRADBP1-201ENST00000478954 CDHR5Q9HBB8 845 aa10.77□□□□□ -0.69
STRADBP1-201ENST00000478954 DAXXQ9UER7 740 aaPredicted RBP10.76□□□□□ -0.69
STRADBP1-201ENST00000478954 MAP3K7O43318 606 aa10.74□□□□□ -0.69
STRADBP1-201ENST00000478954 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
STRADBP1-201ENST00000478954 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
STRADBP1-201ENST00000478954 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
STRADBP1-201ENST00000478954 BCL2L12Q9HB09 334 aa10.73□□□□□ -0.69
STRADBP1-201ENST00000478954 SLC24A3Q9HC58 644 aa10.73□□□□□ -0.69
STRADBP1-201ENST00000478954 NACADO15069 1562 aa10.73□□□□□ -0.69
STRADBP1-201ENST00000478954 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
STRADBP1-201ENST00000478954 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
STRADBP1-201ENST00000478954 PSEN2P49810 448 aa10.71□□□□□ -0.69
STRADBP1-201ENST00000478954 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
STRADBP1-201ENST00000478954 GPR37O15354 613 aa10.7□□□□□ -0.7
STRADBP1-201ENST00000478954 COL9A1P20849 921 aa10.7□□□□□ -0.7
STRADBP1-201ENST00000478954 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
STRADBP1-201ENST00000478954 CUX2O14529 1486 aa10.69□□□□□ -0.7
STRADBP1-201ENST00000478954 KCNK17Q96T54 332 aa10.69□□□□□ -0.7
STRADBP1-201ENST00000478954 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
STRADBP1-201ENST00000478954 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
STRADBP1-201ENST00000478954 PTPREP23469 700 aa10.67□□□□□ -0.7
STRADBP1-201ENST00000478954 GPIHBP1Q8IV16 184 aa10.67□□□□□ -0.7
STRADBP1-201ENST00000478954 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
STRADBP1-201ENST00000478954 SPNS2Q8IVW8 549 aa10.66□□□□□ -0.7
STRADBP1-201ENST00000478954 PTGDRQ13258 359 aa10.65□□□□□ -0.7
STRADBP1-201ENST00000478954 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
STRADBP1-201ENST00000478954 PPP1R3GB7ZBB8 358 aa10.63□□□□□ -0.71
STRADBP1-201ENST00000478954 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
STRADBP1-201ENST00000478954 ZMYND10O75800 440 aa10.62□□□□□ -0.71
STRADBP1-201ENST00000478954 PBX2P40425 430 aa10.62□□□□□ -0.71
STRADBP1-201ENST00000478954 FECHP22830 423 aa10.61□□□□□ -0.71
STRADBP1-201ENST00000478954 PROX2Q3B8N5 592 aa10.61□□□□□ -0.71
STRADBP1-201ENST00000478954 ZBED2Q9BTP6 218 aa10.6□□□□□ -0.71
STRADBP1-201ENST00000478954 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
STRADBP1-201ENST00000478954 FCHSD2O94868 740 aa10.59□□□□□ -0.71
STRADBP1-201ENST00000478954 EIF4G1Q04637 1599 aaKnown RBP10.58□□□□□ -0.72
STRADBP1-201ENST00000478954 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
STRADBP1-201ENST00000478954 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
STRADBP1-201ENST00000478954 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
STRADBP1-201ENST00000478954 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
STRADBP1-201ENST00000478954 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
STRADBP1-201ENST00000478954 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
STRADBP1-201ENST00000478954 CDCA7LQ96GN5 454 aa10.56□□□□□ -0.72
STRADBP1-201ENST00000478954 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
STRADBP1-201ENST00000478954 GNPATO15228 680 aa10.55□□□□□ -0.72
STRADBP1-201ENST00000478954 PRSS12P56730 875 aa10.55□□□□□ -0.72
STRADBP1-201ENST00000478954 HIC1Q14526 733 aa10.55□□□□□ -0.72
STRADBP1-201ENST00000478954 TRIM6-TRIM34B2RNG4 842 aa10.54□□□□□ -0.72
STRADBP1-201ENST00000478954 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
STRADBP1-201ENST00000478954 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
STRADBP1-201ENST00000478954 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
STRADBP1-201ENST00000478954 VPS9D1Q9Y2B5 631 aa10.54□□□□□ -0.72
STRADBP1-201ENST00000478954 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
STRADBP1-201ENST00000478954 SLC4A5Q9BY07 1137 aa10.53□□□□□ -0.72
STRADBP1-201ENST00000478954 ADGRD1Q6QNK2 874 aa10.52□□□□□ -0.73
STRADBP1-201ENST00000478954 RBM27Q9P2N5 1060 aaKnown RBP10.52□□□□□ -0.73
STRADBP1-201ENST00000478954 TK2O00142 265 aa10.49□□□□□ -0.73
STRADBP1-201ENST00000478954 HRO43593 1189 aa10.49□□□□□ -0.73
STRADBP1-201ENST00000478954 KIAA1468Q9P260 1216 aa10.49□□□□□ -0.73
STRADBP1-201ENST00000478954 BHMG1C9JSJ3 638 aaPredicted RBP10.47□□□□□ -0.73
STRADBP1-201ENST00000478954 SMAPO00193 183 aa10.47□□□□□ -0.73
STRADBP1-201ENST00000478954 MAP2K5Q13163 448 aa10.47□□□□□ -0.73
STRADBP1-201ENST00000478954 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
STRADBP1-201ENST00000478954 RABGEF1Q9UJ41 708 aa10.47□□□□□ -0.73
STRADBP1-201ENST00000478954 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
STRADBP1-201ENST00000478954 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.73
STRADBP1-201ENST00000478954 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.73
STRADBP1-201ENST00000478954 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.74
STRADBP1-201ENST00000478954 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
STRADBP1-201ENST00000478954 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
STRADBP1-201ENST00000478954 AK7Q96M32 723 aa10.45□□□□□ -0.74
STRADBP1-201ENST00000478954 TATDN2Q93075 761 aa10.44□□□□□ -0.74
STRADBP1-201ENST00000478954 PNMA3Q9UL41 463 aa10.44□□□□□ -0.74
STRADBP1-201ENST00000478954 NBPF26B4DH59 902 aa10.43□□□□□ -0.74
STRADBP1-201ENST00000478954 IRF6O14896 467 aa10.43□□□□□ -0.74
STRADBP1-201ENST00000478954 PACS2Q86VP3 889 aa10.43□□□□□ -0.74
STRADBP1-201ENST00000478954 PHOX2BQ99453 314 aa10.43□□□□□ -0.74
STRADBP1-201ENST00000478954 MINK1Q8N4C8 1332 aaPredicted RBP10.42□□□□□ -0.74
STRADBP1-201ENST00000478954 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
STRADBP1-201ENST00000478954 EYA1Q99502 592 aa10.42□□□□□ -0.74
STRADBP1-201ENST00000478954 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms