RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 RABGEF1Q9UJ41 708 aa4.8□□□□□ -1.64
SRRM1-211ENST00000478890 TSR3Q9UJK0 312 aaKnown RBP4.8□□□□□ -1.64
SRRM1-211ENST00000478890 FBXO3Q9UK99 471 aa4.8□□□□□ -1.64
SRRM1-211ENST00000478890 ZNF454Q8N9F8 522 aa4.79□□□□□ -1.64
SRRM1-211ENST00000478890 TJAP1Q5JTD0 557 aa4.78□□□□□ -1.64
SRRM1-211ENST00000478890 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
SRRM1-211ENST00000478890 ZFRQ96KR1 1074 aaKnown RBP4.78□□□□□ -1.64
SRRM1-211ENST00000478890 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
SRRM1-211ENST00000478890 GGCXP38435 758 aa4.77□□□□□ -1.65
SRRM1-211ENST00000478890 NLRP6P59044 892 aa4.77□□□□□ -1.65
SRRM1-211ENST00000478890 KCNMA1Q12791 1236 aa4.77□□□□□ -1.65
SRRM1-211ENST00000478890 GMPR2Q9P2T1 348 aaKnown RBP4.77□□□□□ -1.65
SRRM1-211ENST00000478890 BTBD11A6QL63 1104 aa4.76□□□□□ -1.65
SRRM1-211ENST00000478890 CRIPAKQ8N1N5 446 aa4.76□□□□□ -1.65
SRRM1-211ENST00000478890 KLHL34Q8N239 644 aa4.75□□□□□ -1.65
SRRM1-211ENST00000478890 IL21Q9HBE4 155 aa4.75□□□□□ -1.65
SRRM1-211ENST00000478890 HPS5Q9UPZ3 1129 aa4.74□□□□□ -1.65
SRRM1-211ENST00000478890 TMUB1Q9BVT8 246 aa4.73□□□□□ -1.65
SRRM1-211ENST00000478890 VASPP50552 380 aaPredicted RBP4.72□□□□□ -1.65
SRRM1-211ENST00000478890 TMEM151AQ8N4L1 468 aa4.72□□□□□ -1.65
SRRM1-211ENST00000478890 LRCH3Q96II8 777 aa4.72□□□□□ -1.65
SRRM1-211ENST00000478890 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.72□□□□□ -1.65
SRRM1-211ENST00000478890 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
SRRM1-211ENST00000478890 SLC19A1P41440 591 aa4.71□□□□□ -1.66
SRRM1-211ENST00000478890 FOSBP53539 338 aa4.71□□□□□ -1.66
SRRM1-211ENST00000478890 ZNF598Q86UK7 904 aaKnown RBP4.71□□□□□ -1.66
SRRM1-211ENST00000478890 FBXO22Q8NEZ5 403 aa4.71□□□□□ -1.66
SRRM1-211ENST00000478890 MTRQ99707 1265 aa4.71□□□□□ -1.66
SRRM1-211ENST00000478890 SLC16A10Q8TF71 515 aa4.7□□□□□ -1.66
SRRM1-211ENST00000478890 DACH1Q9UI36 760 aa4.7□□□□□ -1.66
SRRM1-211ENST00000478890 PPP1R3GB7ZBB8 358 aa4.69□□□□□ -1.66
SRRM1-211ENST00000478890 GSK3AP49840 483 aa4.69□□□□□ -1.66
SRRM1-211ENST00000478890 SPRYD7Q5W111 196 aa4.69□□□□□ -1.66
SRRM1-211ENST00000478890 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
SRRM1-211ENST00000478890 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
SRRM1-211ENST00000478890 GDF11O95390 407 aa4.68□□□□□ -1.66
SRRM1-211ENST00000478890 IGHA1P01876 353 aa4.68□□□□□ -1.66
SRRM1-211ENST00000478890 GMPRP36959 345 aa4.68□□□□□ -1.66
SRRM1-211ENST00000478890 AXIN1O15169 862 aa4.67□□□□□ -1.66
SRRM1-211ENST00000478890 GDF9O60383 454 aa4.67□□□□□ -1.66
SRRM1-211ENST00000478890 PPP4CP60510 307 aa4.67□□□□□ -1.66
SRRM1-211ENST00000478890 PROX2Q3B8N5 592 aa4.67□□□□□ -1.66
SRRM1-211ENST00000478890 ZDHHC16Q969W1 377 aa4.67□□□□□ -1.66
SRRM1-211ENST00000478890 CTC1Q2NKJ3 1217 aa4.66□□□□□ -1.66
SRRM1-211ENST00000478890 JPH4Q96JJ6 628 aa4.66□□□□□ -1.66
SRRM1-211ENST00000478890 ADAM33Q9BZ11 813 aa4.66□□□□□ -1.66
SRRM1-211ENST00000478890 CIZ1Q9ULV3 898 aaPredicted RBP4.66□□□□□ -1.66
SRRM1-211ENST00000478890 TNFRSF10AO00220 468 aa4.65□□□□□ -1.67
SRRM1-211ENST00000478890 AVPP01185 164 aa4.65□□□□□ -1.67
SRRM1-211ENST00000478890 FAM98CQ17RN3 349 aaKnown RBP4.65□□□□□ -1.67
SRRM1-211ENST00000478890 ZNF697Q5TEC3 545 aa4.65□□□□□ -1.67
SRRM1-211ENST00000478890 ONECUT3O60422 494 aaPredicted RBP4.64□□□□□ -1.67
SRRM1-211ENST00000478890 FOXK1P85037 733 aa4.64□□□□□ -1.67
SRRM1-211ENST00000478890 PLPP6Q8IY26 295 aa4.64□□□□□ -1.67
SRRM1-211ENST00000478890 ZNF516Q92618 1163 aa4.64□□□□□ -1.67
SRRM1-211ENST00000478890 IRF7Q92985 503 aa4.64□□□□□ -1.67
SRRM1-211ENST00000478890 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
SRRM1-211ENST00000478890 KIAA1468Q9P260 1216 aa4.64□□□□□ -1.67
SRRM1-211ENST00000478890 RASSF7Q02833 373 aa4.63□□□□□ -1.67
SRRM1-211ENST00000478890 SNRPBP14678 240 aaKnown RBP4.62□□□□□ -1.67
SRRM1-211ENST00000478890 SMCPP49901 116 aaPredicted RBP4.62□□□□□ -1.67
SRRM1-211ENST00000478890 NKX2-3Q8TAU0 364 aa4.62□□□□□ -1.67
SRRM1-211ENST00000478890 TRIM41Q8WV44 630 aa4.62□□□□□ -1.67
SRRM1-211ENST00000478890 SPOCK2Q92563 424 aa4.62□□□□□ -1.67
SRRM1-211ENST00000478890 EMID1Q96A84 441 aaPredicted RBP4.62□□□□□ -1.67
SRRM1-211ENST00000478890 SEPT9Q9UHD8 586 aaPredicted RBP4.62□□□□□ -1.67
SRRM1-211ENST00000478890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.61□□□□□ -1.67
SRRM1-211ENST00000478890 RNF225M0QZC1 329 aaPredicted RBP4.61□□□□□ -1.67
SRRM1-211ENST00000478890 ZFP91Q96JP5 570 aaPredicted RBP4.61□□□□□ -1.67
SRRM1-211ENST00000478890 SENP2Q9HC62 589 aa4.61□□□□□ -1.67
SRRM1-211ENST00000478890 GPAT2Q6NUI2 795 aa4.6□□□□□ -1.67
SRRM1-211ENST00000478890 LMOD2Q6P5Q4 547 aa4.6□□□□□ -1.67
SRRM1-211ENST00000478890 IFNLR1Q8IU57 520 aaPredicted RBP4.6□□□□□ -1.67
SRRM1-211ENST00000478890 TRIM47Q96LD4 638 aa4.6□□□□□ -1.67
SRRM1-211ENST00000478890 NPAS3Q8IXF0 933 aa4.59□□□□□ -1.67
SRRM1-211ENST00000478890 OXER1Q8TDS5 423 aa4.59□□□□□ -1.67
SRRM1-211ENST00000478890 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
SRRM1-211ENST00000478890 ADAM23O75077 832 aa4.58□□□□□ -1.68
SRRM1-211ENST00000478890 NXF1Q9UBU9 619 aaKnown RBP4.58□□□□□ -1.68
SRRM1-211ENST00000478890 RNF223E7ERA6 249 aa4.57□□□□□ -1.68
SRRM1-211ENST00000478890 VGFO15240 615 aaPredicted RBP4.57□□□□□ -1.68
SRRM1-211ENST00000478890 COL9A1P20849 921 aa4.57□□□□□ -1.68
SRRM1-211ENST00000478890 FOXK2Q01167 660 aa4.57□□□□□ -1.68
SRRM1-211ENST00000478890 KIFC2Q96AC6 838 aa4.57□□□□□ -1.68
SRRM1-211ENST00000478890 MFRPQ9BY79 579 aa4.57□□□□□ -1.68
SRRM1-211ENST00000478890 DNMT3AQ9Y6K1 912 aaPredicted RBP4.57□□□□□ -1.68
SRRM1-211ENST00000478890 ATP13A2Q9NQ11 1180 aa4.56□□□□□ -1.68
SRRM1-211ENST00000478890 RIOK3O14730 519 aaKnown RBP4.55□□□□□ -1.68
SRRM1-211ENST00000478890 Q8N3U1 123 aa4.55□□□□□ -1.68
SRRM1-211ENST00000478890 ANKLE1Q8NAG6 615 aa4.55□□□□□ -1.68
SRRM1-211ENST00000478890 LIAT1Q6ZQX7 453 aa4.54□□□□□ -1.68
SRRM1-211ENST00000478890 DSG2Q14126 1118 aa4.53□□□□□ -1.68
SRRM1-211ENST00000478890 GPHNQ9NQX3 736 aaPredicted RBP4.53□□□□□ -1.68
SRRM1-211ENST00000478890 UPF1Q92900 1129 aaKnown RBP eCLIP4.52□□□□□ -1.69
SRRM1-211ENST00000478890 TRIM6-TRIM34B2RNG4 842 aa4.51□□□□□ -1.69
SRRM1-211ENST00000478890 H3BM21 787 aa4.51□□□□□ -1.69
SRRM1-211ENST00000478890 TOR4AQ9NXH8 423 aa4.51□□□□□ -1.69
SRRM1-211ENST00000478890 PKD2L1Q9P0L9 805 aa4.51□□□□□ -1.69
SRRM1-211ENST00000478890 ZPR1O75312 459 aa4.5□□□□□ -1.69
SRRM1-211ENST00000478890 FOXC1Q12948 553 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms