RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
HDAC7-221ENST00000477203 CCDC144AA2RUR9 1427 aa18.55■□□□□ 0.56
HDAC7-221ENST00000477203 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
HDAC7-221ENST00000477203 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
HDAC7-221ENST00000477203 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
HDAC7-221ENST00000477203 BCANQ96GW7 911 aa18.54■□□□□ 0.56
HDAC7-221ENST00000477203 FANCAO15360 1455 aa18.54■□□□□ 0.56
HDAC7-221ENST00000477203 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.55
HDAC7-221ENST00000477203 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
HDAC7-221ENST00000477203 GGT6Q6P531 493 aa18.49■□□□□ 0.55
HDAC7-221ENST00000477203 ABCC1P33527 1531 aa18.49■□□□□ 0.55
HDAC7-221ENST00000477203 RAPGEF3O95398 923 aa18.49■□□□□ 0.55
HDAC7-221ENST00000477203 ADGRL1O94910 1474 aa18.48■□□□□ 0.55
HDAC7-221ENST00000477203 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
HDAC7-221ENST00000477203 CCER2I3L3R5 266 aa18.47■□□□□ 0.55
HDAC7-221ENST00000477203 MRS2Q9HD23 443 aa18.47■□□□□ 0.55
HDAC7-221ENST00000477203 TSHZ2Q9NRE2 1034 aa18.47■□□□□ 0.55
HDAC7-221ENST00000477203 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
HDAC7-221ENST00000477203 CFAP65Q6ZU64 1925 aaKnown RBP18.46■□□□□ 0.55
HDAC7-221ENST00000477203 CNTLNQ9NXG0 1405 aa18.45■□□□□ 0.54
HDAC7-221ENST00000477203 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
HDAC7-221ENST00000477203 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-221ENST00000477203 DUOX2Q9NRD8 1548 aa18.44■□□□□ 0.54
HDAC7-221ENST00000477203 SUPT16HQ9Y5B9 1047 aaKnown RBP18.43■□□□□ 0.54
HDAC7-221ENST00000477203 CD109Q6YHK3 1445 aa18.41■□□□□ 0.54
HDAC7-221ENST00000477203 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
HDAC7-221ENST00000477203 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
HDAC7-221ENST00000477203 FKBP8Q14318 412 aa18.39■□□□□ 0.53
HDAC7-221ENST00000477203 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
HDAC7-221ENST00000477203 IRX6P78412 446 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-221ENST00000477203 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
HDAC7-221ENST00000477203 ERBINQ96RT1 1412 aa18.37■□□□□ 0.53
HDAC7-221ENST00000477203 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-221ENST00000477203 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
HDAC7-221ENST00000477203 A2MP01023 1474 aa18.36■□□□□ 0.53
HDAC7-221ENST00000477203 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
HDAC7-221ENST00000477203 UNC13BO14795 1591 aa18.35■□□□□ 0.53
HDAC7-221ENST00000477203 KANK1Q14678 1352 aa18.34■□□□□ 0.53
HDAC7-221ENST00000477203 RALGAPBQ86X10 1494 aa18.34■□□□□ 0.53
HDAC7-221ENST00000477203 ABCA9Q8IUA7 1624 aa18.33■□□□□ 0.53
HDAC7-221ENST00000477203 PRAG1Q86YV5 1406 aa18.33■□□□□ 0.52
HDAC7-221ENST00000477203 KDM5CP41229 1560 aa18.32■□□□□ 0.52
HDAC7-221ENST00000477203 IQGAP3Q86VI3 1631 aa18.32■□□□□ 0.52
HDAC7-221ENST00000477203 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
HDAC7-221ENST00000477203 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
HDAC7-221ENST00000477203 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
HDAC7-221ENST00000477203 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
HDAC7-221ENST00000477203 CC2D1BQ5T0F9 858 aaKnown RBP18.3■□□□□ 0.52
HDAC7-221ENST00000477203 DHX29Q7Z478 1369 aaKnown RBP18.29■□□□□ 0.52
HDAC7-221ENST00000477203 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
HDAC7-221ENST00000477203 E9PCH4 1651 aa18.28■□□□□ 0.52
HDAC7-221ENST00000477203 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
HDAC7-221ENST00000477203 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
HDAC7-221ENST00000477203 ATP10AO60312 1499 aa18.26■□□□□ 0.51
HDAC7-221ENST00000477203 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
HDAC7-221ENST00000477203 NEFLP07196 543 aa18.25■□□□□ 0.51
HDAC7-221ENST00000477203 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
HDAC7-221ENST00000477203 MLECQ14165 292 aa18.25■□□□□ 0.51
HDAC7-221ENST00000477203 ZNF518AQ6AHZ1 1483 aa18.23■□□□□ 0.51
HDAC7-221ENST00000477203 KIDINS220Q9ULH0 1771 aa18.23■□□□□ 0.51
HDAC7-221ENST00000477203 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
HDAC7-221ENST00000477203 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
HDAC7-221ENST00000477203 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-221ENST00000477203 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
HDAC7-221ENST00000477203 PANK3Q9H999 370 aa18.22■□□□□ 0.51
HDAC7-221ENST00000477203 TESK2Q96S53 571 aa18.21■□□□□ 0.51
HDAC7-221ENST00000477203 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
HDAC7-221ENST00000477203 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
HDAC7-221ENST00000477203 CLTCL1P53675 1640 aa18.19■□□□□ 0.5
HDAC7-221ENST00000477203 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
HDAC7-221ENST00000477203 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
HDAC7-221ENST00000477203 TMF1P82094 1093 aa18.18■□□□□ 0.5
HDAC7-221ENST00000477203 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
HDAC7-221ENST00000477203 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
HDAC7-221ENST00000477203 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
HDAC7-221ENST00000477203 CEP152O94986 1710 aa18.16■□□□□ 0.5
HDAC7-221ENST00000477203 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
HDAC7-221ENST00000477203 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
HDAC7-221ENST00000477203 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
HDAC7-221ENST00000477203 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
HDAC7-221ENST00000477203 TET3O43151 1660 aa18.12■□□□□ 0.49
HDAC7-221ENST00000477203 TRPM2O94759 1503 aa18.12■□□□□ 0.49
HDAC7-221ENST00000477203 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
HDAC7-221ENST00000477203 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
HDAC7-221ENST00000477203 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
HDAC7-221ENST00000477203 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
HDAC7-221ENST00000477203 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-221ENST00000477203 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-221ENST00000477203 PTPRTO14522 1441 aa18.11■□□□□ 0.49
HDAC7-221ENST00000477203 NPATQ14207 1427 aa18.1■□□□□ 0.49
HDAC7-221ENST00000477203 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
HDAC7-221ENST00000477203 NOS1P29475 1434 aa18.1■□□□□ 0.49
HDAC7-221ENST00000477203 STK26Q9P289 416 aa18.09■□□□□ 0.49
HDAC7-221ENST00000477203 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
HDAC7-221ENST00000477203 GPRASP1Q5JY77 1395 aa18.09■□□□□ 0.49
HDAC7-221ENST00000477203 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
HDAC7-221ENST00000477203 PNISRQ8TF01 805 aaKnown RBP18.08■□□□□ 0.49
HDAC7-221ENST00000477203 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.48
HDAC7-221ENST00000477203 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.48
HDAC7-221ENST00000477203 PER1O15534 1290 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms