RNA–Protein interactions for RNA: ENST00000476060.2

SENP6-207, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-207ENST00000476060 ARID3CA6NKF2 412 aa5.68□□□□□ -1.5
SENP6-207ENST00000476060 OSBPP22059 807 aa5.68□□□□□ -1.5
SENP6-207ENST00000476060 HOXB3P14651 431 aaPredicted RBP5.67□□□□□ -1.5
SENP6-207ENST00000476060 GNPATO15228 680 aa5.67□□□□□ -1.5
SENP6-207ENST00000476060 C1orf115Q9H7X2 142 aa5.67□□□□□ -1.5
SENP6-207ENST00000476060 BOLA1Q9Y3E2 137 aa5.67□□□□□ -1.5
SENP6-207ENST00000476060 PRIM1P49642 420 aaKnown RBP5.66□□□□□ -1.5
SENP6-207ENST00000476060 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
SENP6-207ENST00000476060 PODXL2Q9NZ53 605 aa5.66□□□□□ -1.5
SENP6-207ENST00000476060 DDRGK1Q96HY6 314 aa5.65□□□□□ -1.5
SENP6-207ENST00000476060 G3V3G9 751 aa5.65□□□□□ -1.51
SENP6-207ENST00000476060 KIF3CO14782 793 aa5.65□□□□□ -1.51
SENP6-207ENST00000476060 AMHR2Q16671 573 aa5.65□□□□□ -1.51
SENP6-207ENST00000476060 ERBB3P21860 1342 aa5.65□□□□□ -1.51
SENP6-207ENST00000476060 FCHSD2O94868 740 aa5.64□□□□□ -1.51
SENP6-207ENST00000476060 ZNF710Q8N1W2 664 aa5.64□□□□□ -1.51
SENP6-207ENST00000476060 HOXB1P14653 301 aaPredicted RBP5.64□□□□□ -1.51
SENP6-207ENST00000476060 HIC1Q14526 733 aa5.63□□□□□ -1.51
SENP6-207ENST00000476060 TMEM92Q6UXU6 159 aa5.63□□□□□ -1.51
SENP6-207ENST00000476060 RNF166Q96A37 237 aaPredicted RBP5.63□□□□□ -1.51
SENP6-207ENST00000476060 APBB1O00213 710 aa5.62□□□□□ -1.51
SENP6-207ENST00000476060 OXER1Q8TDS5 423 aa5.62□□□□□ -1.51
SENP6-207ENST00000476060 EVI5O60447 810 aa5.62□□□□□ -1.51
SENP6-207ENST00000476060 MS4A1P11836 297 aa5.62□□□□□ -1.51
SENP6-207ENST00000476060 TRIM26Q12899 539 aaPredicted RBP5.62□□□□□ -1.51
SENP6-207ENST00000476060 GIGYF2Q6Y7W6 1299 aaKnown RBP5.62□□□□□ -1.51
SENP6-207ENST00000476060 REPIN1Q9BWE0 567 aaKnown RBP5.62□□□□□ -1.51
SENP6-207ENST00000476060 PTGDRQ13258 359 aa5.6□□□□□ -1.51
SENP6-207ENST00000476060 DOK7Q18PE1 504 aa5.6□□□□□ -1.51
SENP6-207ENST00000476060 VARS2Q5ST30 1063 aaKnown RBP5.6□□□□□ -1.51
SENP6-207ENST00000476060 CLUAP1Q96AJ1 413 aa5.6□□□□□ -1.51
SENP6-207ENST00000476060 PTGER2P43116 358 aa5.6□□□□□ -1.51
SENP6-207ENST00000476060 CDHR5Q9HBB8 845 aa5.6□□□□□ -1.51
SENP6-207ENST00000476060 TBC1D12O60347 775 aa5.59□□□□□ -1.51
SENP6-207ENST00000476060 FLIIQ13045 1269 aa5.59□□□□□ -1.51
SENP6-207ENST00000476060 PCMTD1Q96MG8 357 aaPredicted RBP5.59□□□□□ -1.51
SENP6-207ENST00000476060 MYT1LQ9UL68 1186 aa5.59□□□□□ -1.51
SENP6-207ENST00000476060 ATP1B4Q9UN42 357 aaPredicted RBP5.58□□□□□ -1.52
SENP6-207ENST00000476060 RBM33Q96EV2 1170 aaKnown RBP5.58□□□□□ -1.52
SENP6-207ENST00000476060 ONECUT3O60422 494 aaPredicted RBP5.57□□□□□ -1.52
SENP6-207ENST00000476060 MDM2Q00987 491 aaPredicted RBP5.57□□□□□ -1.52
SENP6-207ENST00000476060 HRCP23327 699 aa5.57□□□□□ -1.52
SENP6-207ENST00000476060 FAM161AQ3B820 660 aa5.57□□□□□ -1.52
SENP6-207ENST00000476060 NLRP7Q8WX94 980 aa5.57□□□□□ -1.52
SENP6-207ENST00000476060 RIMBP2O15034 1052 aa5.56□□□□□ -1.52
SENP6-207ENST00000476060 PHOX2BQ99453 314 aa5.56□□□□□ -1.52
SENP6-207ENST00000476060 MAP3K7O43318 606 aa5.55□□□□□ -1.52
SENP6-207ENST00000476060 GOPCQ9HD26 462 aa5.55□□□□□ -1.52
SENP6-207ENST00000476060 NPDC1Q9NQX5 325 aaPredicted RBP5.55□□□□□ -1.52
SENP6-207ENST00000476060 ZNF687Q8N1G0 1237 aa5.55□□□□□ -1.52
SENP6-207ENST00000476060 TSR1Q2NL82 804 aaKnown RBP5.54□□□□□ -1.52
SENP6-207ENST00000476060 CCDC82Q8N4S0 544 aa5.54□□□□□ -1.52
SENP6-207ENST00000476060 TRAK2O60296 914 aa5.54□□□□□ -1.52
SENP6-207ENST00000476060 PROCA1Q8NCQ7 364 aaPredicted RBP5.54□□□□□ -1.52
SENP6-207ENST00000476060 POLR3EQ9NVU0 708 aa5.54□□□□□ -1.52
SENP6-207ENST00000476060 SSTR3P32745 418 aaPredicted RBP5.53□□□□□ -1.52
SENP6-207ENST00000476060 CLCN1P35523 988 aa5.53□□□□□ -1.52
SENP6-207ENST00000476060 EN1Q05925 392 aaPredicted RBP5.53□□□□□ -1.52
SENP6-207ENST00000476060 MCM6Q14566 821 aa5.53□□□□□ -1.52
SENP6-207ENST00000476060 SH3D19Q5HYK7 790 aa5.53□□□□□ -1.52
SENP6-207ENST00000476060 GPR153Q6NV75 609 aa5.53□□□□□ -1.52
SENP6-207ENST00000476060 TMUB1Q9BVT8 246 aa5.53□□□□□ -1.52
SENP6-207ENST00000476060 GPCPD1Q9NPB8 672 aa5.53□□□□□ -1.52
SENP6-207ENST00000476060 ZNF777Q9ULD5 760 aaPredicted RBP5.53□□□□□ -1.52
SENP6-207ENST00000476060 ANKRD13DQ6ZTN6 518 aa5.52□□□□□ -1.53
SENP6-207ENST00000476060 PTCD2Q8WV60 388 aaKnown RBP5.52□□□□□ -1.53
SENP6-207ENST00000476060 POM121Q96HA1 1249 aa5.52□□□□□ -1.53
SENP6-207ENST00000476060 BEGAINQ9BUH8 593 aa5.52□□□□□ -1.53
SENP6-207ENST00000476060 A6NJR5 290 aa5.51□□□□□ -1.53
SENP6-207ENST00000476060 PCDHGA10Q9Y5H3 936 aa5.51□□□□□ -1.53
SENP6-207ENST00000476060 PHF14O94880 888 aa5.5□□□□□ -1.53
SENP6-207ENST00000476060 SKIV2LQ15477 1246 aaKnown RBP5.5□□□□□ -1.53
SENP6-207ENST00000476060 ARSIQ5FYB1 569 aa5.5□□□□□ -1.53
SENP6-207ENST00000476060 ANO8Q9HCE9 1232 aaPredicted RBP5.5□□□□□ -1.53
SENP6-207ENST00000476060 ZSWIM6Q9HCJ5 1215 aa5.5□□□□□ -1.53
SENP6-207ENST00000476060 KHSRPQ92945 711 aaKnown RBP eCLIP5.5□□□□□ -1.531e-7■■■□□ 15
SENP6-207ENST00000476060 EPAS1Q99814 870 aa5.5□□□□□ -1.53
SENP6-207ENST00000476060 PDIA4P13667 645 aaKnown RBP5.49□□□□□ -1.53
SENP6-207ENST00000476060 PROSER2Q86WR7 435 aaPredicted RBP5.49□□□□□ -1.53
SENP6-207ENST00000476060 FAM217BQ9NTX9 383 aaPredicted RBP5.49□□□□□ -1.53
SENP6-207ENST00000476060 PADI6Q6TGC4 694 aa5.48□□□□□ -1.53
SENP6-207ENST00000476060 METTL3Q86U44 580 aaKnown RBP5.48□□□□□ -1.53
SENP6-207ENST00000476060 MYSM1Q5VVJ2 828 aa5.47□□□□□ -1.53
SENP6-207ENST00000476060 TYW1BQ6NUM6 668 aa5.47□□□□□ -1.53
SENP6-207ENST00000476060 RAD21O60216 631 aa5.46□□□□□ -1.53
SENP6-207ENST00000476060 PCDHGA4Q9Y5G9 962 aa5.46□□□□□ -1.53
SENP6-207ENST00000476060 RANGAP1P46060 587 aaPredicted RBP5.46□□□□□ -1.54
SENP6-207ENST00000476060 FBXO31Q5XUX0 539 aaPredicted RBP5.46□□□□□ -1.54
SENP6-207ENST00000476060 SNRKQ9NRH2 765 aa5.46□□□□□ -1.54
SENP6-207ENST00000476060 SLC34A2O95436 690 aa5.45□□□□□ -1.54
SENP6-207ENST00000476060 ADGRG1Q9Y653 693 aa5.45□□□□□ -1.54
SENP6-207ENST00000476060 CLK2P49760 499 aaKnown RBP5.45□□□□□ -1.54
SENP6-207ENST00000476060 LSM11P83369 360 aaKnown RBP eCLIP5.45□□□□□ -1.54
SENP6-207ENST00000476060 FNBP4Q8N3X1 1017 aaPredicted RBP5.45□□□□□ -1.54
SENP6-207ENST00000476060 PXYLP1Q8TE99 480 aa5.45□□□□□ -1.54
SENP6-207ENST00000476060 NECTIN2Q92692 538 aa5.45□□□□□ -1.54
SENP6-207ENST00000476060 TBC1D2Q9BYX2 928 aa5.45□□□□□ -1.54
SENP6-207ENST00000476060 OATP04181 439 aa5.44□□□□□ -1.54
SENP6-207ENST00000476060 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.44□□□□□ -1.54
SENP6-207ENST00000476060 C6orf132Q5T0Z8 1188 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms