RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 NBR1Q14596 966 aa12.25□□□□□ -0.45
PRKD3-208ENST00000475912 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
PRKD3-208ENST00000475912 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
PRKD3-208ENST00000475912 ADGRD1Q6QNK2 874 aa12.2□□□□□ -0.46
PRKD3-208ENST00000475912 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
PRKD3-208ENST00000475912 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
PRKD3-208ENST00000475912 MLLT3P42568 568 aaPredicted RBP12.18□□□□□ -0.46
PRKD3-208ENST00000475912 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
PRKD3-208ENST00000475912 MAP3K7O43318 606 aa12.17□□□□□ -0.46
PRKD3-208ENST00000475912 COL9A1P20849 921 aa12.17□□□□□ -0.46
PRKD3-208ENST00000475912 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
PRKD3-208ENST00000475912 TK2O00142 265 aa12.16□□□□□ -0.46
PRKD3-208ENST00000475912 OSBPP22059 807 aa12.16□□□□□ -0.46
PRKD3-208ENST00000475912 TSR1Q2NL82 804 aaKnown RBP12.16□□□□□ -0.46
PRKD3-208ENST00000475912 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
PRKD3-208ENST00000475912 SEMA3EO15041 775 aa12.15□□□□□ -0.46
PRKD3-208ENST00000475912 ZBED2Q9BTP6 218 aa12.15□□□□□ -0.46
PRKD3-208ENST00000475912 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
PRKD3-208ENST00000475912 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
PRKD3-208ENST00000475912 MYT1LQ9UL68 1186 aa12.12□□□□□ -0.47
PRKD3-208ENST00000475912 HRO43593 1189 aa12.11□□□□□ -0.47
PRKD3-208ENST00000475912 PROX2Q3B8N5 592 aa12.1□□□□□ -0.47
PRKD3-208ENST00000475912 CDHR5Q9HBB8 845 aa12.1□□□□□ -0.47
PRKD3-208ENST00000475912 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
PRKD3-208ENST00000475912 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
PRKD3-208ENST00000475912 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
PRKD3-208ENST00000475912 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.49
PRKD3-208ENST00000475912 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
PRKD3-208ENST00000475912 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
PRKD3-208ENST00000475912 CERKQ8TCT0 537 aa12□□□□□ -0.49
PRKD3-208ENST00000475912 PRSS12P56730 875 aa11.99□□□□□ -0.49
PRKD3-208ENST00000475912 MRPL50Q8N5N7 158 aaKnown RBP11.99□□□□□ -0.49
PRKD3-208ENST00000475912 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
PRKD3-208ENST00000475912 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
PRKD3-208ENST00000475912 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
PRKD3-208ENST00000475912 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
PRKD3-208ENST00000475912 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
PRKD3-208ENST00000475912 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
PRKD3-208ENST00000475912 RBM26Q5T8P6 1007 aaKnown RBP11.97□□□□□ -0.49
PRKD3-208ENST00000475912 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
PRKD3-208ENST00000475912 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
PRKD3-208ENST00000475912 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
PRKD3-208ENST00000475912 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
PRKD3-208ENST00000475912 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
PRKD3-208ENST00000475912 GOLGA8CPA6NN73 597 aa11.93□□□□□ -0.5
PRKD3-208ENST00000475912 PTGDRQ13258 359 aa11.93□□□□□ -0.5
PRKD3-208ENST00000475912 PADI6Q6TGC4 694 aa11.93□□□□□ -0.5
PRKD3-208ENST00000475912 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
PRKD3-208ENST00000475912 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
PRKD3-208ENST00000475912 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
PRKD3-208ENST00000475912 LAPTM4BQ86VI4 370 aa11.9□□□□□ -0.5
PRKD3-208ENST00000475912 WNT2BQ93097 391 aa11.9□□□□□ -0.5
PRKD3-208ENST00000475912 SMAPO00193 183 aa11.89□□□□□ -0.51
PRKD3-208ENST00000475912 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
PRKD3-208ENST00000475912 TTC13Q8NBP0 860 aa11.88□□□□□ -0.51
PRKD3-208ENST00000475912 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
PRKD3-208ENST00000475912 FCHSD2O94868 740 aa11.87□□□□□ -0.51
PRKD3-208ENST00000475912 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
PRKD3-208ENST00000475912 TATDN2Q93075 761 aa11.87□□□□□ -0.51
PRKD3-208ENST00000475912 ZFRQ96KR1 1074 aaKnown RBP11.87□□□□□ -0.51
PRKD3-208ENST00000475912 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
PRKD3-208ENST00000475912 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
PRKD3-208ENST00000475912 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
PRKD3-208ENST00000475912 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
PRKD3-208ENST00000475912 PTPN5P54829 565 aa11.84□□□□□ -0.51
PRKD3-208ENST00000475912 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
PRKD3-208ENST00000475912 GPR37O15354 613 aa11.83□□□□□ -0.52
PRKD3-208ENST00000475912 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
PRKD3-208ENST00000475912 BCAMP50895 628 aa11.82□□□□□ -0.52
PRKD3-208ENST00000475912 HIC1Q14526 733 aa11.8□□□□□ -0.52
PRKD3-208ENST00000475912 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
PRKD3-208ENST00000475912 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
PRKD3-208ENST00000475912 FECHP22830 423 aa11.78□□□□□ -0.52
PRKD3-208ENST00000475912 LRCH3Q96II8 777 aa11.78□□□□□ -0.52
PRKD3-208ENST00000475912 ADGRG1Q9Y653 693 aa11.78□□□□□ -0.52
PRKD3-208ENST00000475912 GNPATO15228 680 aa11.77□□□□□ -0.53
PRKD3-208ENST00000475912 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
PRKD3-208ENST00000475912 EYA1Q99502 592 aa11.77□□□□□ -0.53
PRKD3-208ENST00000475912 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.77□□□□□ -0.53
PRKD3-208ENST00000475912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRKD3-208ENST00000475912 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
PRKD3-208ENST00000475912 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
PRKD3-208ENST00000475912 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
PRKD3-208ENST00000475912 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
PRKD3-208ENST00000475912 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
PRKD3-208ENST00000475912 RNF40O75150 1001 aa11.7□□□□□ -0.54
PRKD3-208ENST00000475912 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
PRKD3-208ENST00000475912 PLA2G2EQ9NZK7 142 aa11.7□□□□□ -0.54
PRKD3-208ENST00000475912 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
PRKD3-208ENST00000475912 RCCD1A6NED2 376 aa11.68□□□□□ -0.54
PRKD3-208ENST00000475912 DNAJB2P25686 324 aa11.68□□□□□ -0.54
PRKD3-208ENST00000475912 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
PRKD3-208ENST00000475912 OATP04181 439 aa11.67□□□□□ -0.54
PRKD3-208ENST00000475912 PPP4CP60510 307 aa11.66□□□□□ -0.54
PRKD3-208ENST00000475912 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
PRKD3-208ENST00000475912 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
PRKD3-208ENST00000475912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
PRKD3-208ENST00000475912 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
PRKD3-208ENST00000475912 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
PRKD3-208ENST00000475912 MAP2K5Q13163 448 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms