RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
FN1-219ENST00000474036 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
FN1-219ENST00000474036 UNC13AQ9UPW8 1703 aa11.16□□□□□ -0.62
FN1-219ENST00000474036 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
FN1-219ENST00000474036 DDX12PQ92771 950 aa11.16□□□□□ -0.62
FN1-219ENST00000474036 PTPN5P54829 565 aa11.15□□□□□ -0.62
FN1-219ENST00000474036 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
FN1-219ENST00000474036 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
FN1-219ENST00000474036 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
FN1-219ENST00000474036 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
FN1-219ENST00000474036 THSD4Q6ZMP0 1018 aa11.12□□□□□ -0.63
FN1-219ENST00000474036 MRPL50Q8N5N7 158 aaKnown RBP11.12□□□□□ -0.63
FN1-219ENST00000474036 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
FN1-219ENST00000474036 WNT2BQ93097 391 aa11.1□□□□□ -0.63
FN1-219ENST00000474036 PDIA6Q15084 440 aa11.09□□□□□ -0.63
FN1-219ENST00000474036 EPAS1Q99814 870 aa11.09□□□□□ -0.63
FN1-219ENST00000474036 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
FN1-219ENST00000474036 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
FN1-219ENST00000474036 KIAA1468Q9P260 1216 aa11.07□□□□□ -0.64
FN1-219ENST00000474036 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
FN1-219ENST00000474036 E2F4Q16254 413 aa11.06□□□□□ -0.64
FN1-219ENST00000474036 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
FN1-219ENST00000474036 NBR1Q14596 966 aa11.05□□□□□ -0.64
FN1-219ENST00000474036 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
FN1-219ENST00000474036 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
FN1-219ENST00000474036 BCAMP50895 628 aa11.02□□□□□ -0.65
FN1-219ENST00000474036 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
FN1-219ENST00000474036 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
FN1-219ENST00000474036 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
FN1-219ENST00000474036 TSKSQ9UJT2 592 aa11□□□□□ -0.65
FN1-219ENST00000474036 MAP3K7O43318 606 aa10.99□□□□□ -0.65
FN1-219ENST00000474036 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
FN1-219ENST00000474036 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
FN1-219ENST00000474036 C3orf80F5H4A9 247 aa10.98□□□□□ -0.65
FN1-219ENST00000474036 ZFRQ96KR1 1074 aaKnown RBP10.98□□□□□ -0.65
FN1-219ENST00000474036 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
FN1-219ENST00000474036 FAM198AQ9UFP1 575 aa10.98□□□□□ -0.65
FN1-219ENST00000474036 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
FN1-219ENST00000474036 LAPTM4BQ86VI4 370 aa10.97□□□□□ -0.65
FN1-219ENST00000474036 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
FN1-219ENST00000474036 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
FN1-219ENST00000474036 OSBPP22059 807 aa10.95□□□□□ -0.66
FN1-219ENST00000474036 CDHR5Q9HBB8 845 aa10.95□□□□□ -0.66
FN1-219ENST00000474036 NACADO15069 1562 aa10.94□□□□□ -0.66
FN1-219ENST00000474036 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
FN1-219ENST00000474036 SMAPO00193 183 aa10.92□□□□□ -0.66
FN1-219ENST00000474036 FAM98CQ17RN3 349 aaKnown RBP10.91□□□□□ -0.66
FN1-219ENST00000474036 CDCA7LQ96GN5 454 aa10.91□□□□□ -0.66
FN1-219ENST00000474036 IFFO2Q5TF58 517 aa10.9□□□□□ -0.66
FN1-219ENST00000474036 PRSS12P56730 875 aa10.89□□□□□ -0.67
FN1-219ENST00000474036 BICRAQ9NZM4 1560 aa10.88□□□□□ -0.67
FN1-219ENST00000474036 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
FN1-219ENST00000474036 CC2D2AQ9P2K1 1620 aa10.87□□□□□ -0.67
FN1-219ENST00000474036 A0A0G2JS52 829 aa10.86□□□□□ -0.67
FN1-219ENST00000474036 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
FN1-219ENST00000474036 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
FN1-219ENST00000474036 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
FN1-219ENST00000474036 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
FN1-219ENST00000474036 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.85□□□□□ -0.67
FN1-219ENST00000474036 HPS5Q9UPZ3 1129 aa10.85□□□□□ -0.67
FN1-219ENST00000474036 ITGBL1O95965 494 aaPredicted RBP10.84□□□□□ -0.67
FN1-219ENST00000474036 CECR2Q9BXF3 1484 aa10.84□□□□□ -0.67
FN1-219ENST00000474036 TATDN2Q93075 761 aa10.83□□□□□ -0.68
FN1-219ENST00000474036 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
FN1-219ENST00000474036 SAMD7Q7Z3H4 446 aa10.82□□□□□ -0.68
FN1-219ENST00000474036 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
FN1-219ENST00000474036 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
FN1-219ENST00000474036 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
FN1-219ENST00000474036 TTC13Q8NBP0 860 aa10.8□□□□□ -0.68
FN1-219ENST00000474036 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
FN1-219ENST00000474036 PADI6Q6TGC4 694 aa10.78□□□□□ -0.68
FN1-219ENST00000474036 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
FN1-219ENST00000474036 NYAP1Q6ZVC0 841 aa10.77□□□□□ -0.69
FN1-219ENST00000474036 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
FN1-219ENST00000474036 PPP4CP60510 307 aa10.75□□□□□ -0.69
FN1-219ENST00000474036 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
FN1-219ENST00000474036 KCNC4Q03721 635 aa10.73□□□□□ -0.69
FN1-219ENST00000474036 RGS20O76081 388 aa10.71□□□□□ -0.69
FN1-219ENST00000474036 TJAP1Q5JTD0 557 aa10.71□□□□□ -0.69
FN1-219ENST00000474036 APLP1P51693 650 aa10.69□□□□□ -0.7
FN1-219ENST00000474036 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
FN1-219ENST00000474036 EYA1Q99502 592 aa10.69□□□□□ -0.7
FN1-219ENST00000474036 SEMA3EO15041 775 aa10.68□□□□□ -0.7
FN1-219ENST00000474036 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
FN1-219ENST00000474036 RNF40O75150 1001 aa10.67□□□□□ -0.7
FN1-219ENST00000474036 PTGDRQ13258 359 aa10.67□□□□□ -0.7
FN1-219ENST00000474036 MTRQ99707 1265 aa10.67□□□□□ -0.7
FN1-219ENST00000474036 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
FN1-219ENST00000474036 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
FN1-219ENST00000474036 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
FN1-219ENST00000474036 IRX2Q9BZI1 471 aaPredicted RBP10.64□□□□□ -0.71
FN1-219ENST00000474036 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
FN1-219ENST00000474036 NKX2-3Q8TAU0 364 aa10.61□□□□□ -0.71
FN1-219ENST00000474036 ADGRG1Q9Y653 693 aa10.61□□□□□ -0.71
FN1-219ENST00000474036 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
FN1-219ENST00000474036 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
FN1-219ENST00000474036 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
FN1-219ENST00000474036 COPS2P61201 443 aa10.57□□□□□ -0.72
FN1-219ENST00000474036 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
FN1-219ENST00000474036 PPP1R18Q6NYC8 613 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms