RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 IRF6O14896 467 aa10.34□□□□□ -0.75
PRPF40A-208ENST00000472760 TRIM66O15016 1216 aa10.34□□□□□ -0.75
PRPF40A-208ENST00000472760 FECHP22830 423 aa10.34□□□□□ -0.75
PRPF40A-208ENST00000472760 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
PRPF40A-208ENST00000472760 LHX6Q9UPM6 363 aa10.33□□□□□ -0.76
PRPF40A-208ENST00000472760 C6orf132Q5T0Z8 1188 aa10.32□□□□□ -0.76
PRPF40A-208ENST00000472760 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
PRPF40A-208ENST00000472760 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
PRPF40A-208ENST00000472760 PDE4DQ08499 809 aa10.31□□□□□ -0.76
PRPF40A-208ENST00000472760 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-208ENST00000472760 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-208ENST00000472760 PPP4R3BQ5MIZ7 849 aa10.3□□□□□ -0.76
PRPF40A-208ENST00000472760 ADAM33Q9BZ11 813 aa10.3□□□□□ -0.76
PRPF40A-208ENST00000472760 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
PRPF40A-208ENST00000472760 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-208ENST00000472760 KDM4CQ9H3R0 1056 aa10.25□□□□□ -0.77
PRPF40A-208ENST00000472760 AMHR2Q16671 573 aa10.23□□□□□ -0.77
PRPF40A-208ENST00000472760 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
PRPF40A-208ENST00000472760 PTPREP23469 700 aa10.22□□□□□ -0.77
PRPF40A-208ENST00000472760 PADI6Q6TGC4 694 aa10.22□□□□□ -0.77
PRPF40A-208ENST00000472760 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-208ENST00000472760 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-208ENST00000472760 PRSS12P56730 875 aa10.2□□□□□ -0.78
PRPF40A-208ENST00000472760 CDCA7LQ96GN5 454 aa10.2□□□□□ -0.78
PRPF40A-208ENST00000472760 RBM27Q9P2N5 1060 aaKnown RBP10.2□□□□□ -0.78
PRPF40A-208ENST00000472760 OATP04181 439 aa10.19□□□□□ -0.78
PRPF40A-208ENST00000472760 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
PRPF40A-208ENST00000472760 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
PRPF40A-208ENST00000472760 PARP9Q8IXQ6 854 aa10.18□□□□□ -0.78
PRPF40A-208ENST00000472760 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
PRPF40A-208ENST00000472760 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
PRPF40A-208ENST00000472760 COL9A1P20849 921 aa10.17□□□□□ -0.78
PRPF40A-208ENST00000472760 TTC13Q8NBP0 860 aa10.17□□□□□ -0.78
PRPF40A-208ENST00000472760 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
PRPF40A-208ENST00000472760 ERBB3P21860 1342 aa10.16□□□□□ -0.78
PRPF40A-208ENST00000472760 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
PRPF40A-208ENST00000472760 ST18O60284 1047 aa10.14□□□□□ -0.79
PRPF40A-208ENST00000472760 CLCN1P35523 988 aa10.14□□□□□ -0.79
PRPF40A-208ENST00000472760 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
PRPF40A-208ENST00000472760 METTL3Q86U44 580 aaKnown RBP10.14□□□□□ -0.79
PRPF40A-208ENST00000472760 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
PRPF40A-208ENST00000472760 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
PRPF40A-208ENST00000472760 VARS2Q5ST30 1063 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-208ENST00000472760 GIGYF2Q6Y7W6 1299 aaKnown RBP10.13□□□□□ -0.79
PRPF40A-208ENST00000472760 PHOX2BQ99453 314 aa10.13□□□□□ -0.79
PRPF40A-208ENST00000472760 FAM117AQ9C073 453 aa10.13□□□□□ -0.79
PRPF40A-208ENST00000472760 EMP3P54852 163 aa10.12□□□□□ -0.79
PRPF40A-208ENST00000472760 PXYLP1Q8TE99 480 aa10.12□□□□□ -0.79
PRPF40A-208ENST00000472760 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
PRPF40A-208ENST00000472760 GPCPD1Q9NPB8 672 aa10.12□□□□□ -0.79
PRPF40A-208ENST00000472760 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-208ENST00000472760 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-208ENST00000472760 FAM198AQ9UFP1 575 aa10.11□□□□□ -0.79
PRPF40A-208ENST00000472760 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
PRPF40A-208ENST00000472760 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
PRPF40A-208ENST00000472760 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
PRPF40A-208ENST00000472760 TSKSQ9UJT2 592 aa10.1□□□□□ -0.79
PRPF40A-208ENST00000472760 NLRP7Q8WX94 980 aa10.09□□□□□ -0.79
PRPF40A-208ENST00000472760 NBPF26B4DH59 902 aa10.08□□□□□ -0.8
PRPF40A-208ENST00000472760 ARHGAP33O14559 1287 aa10.08□□□□□ -0.8
PRPF40A-208ENST00000472760 NUDT18Q6ZVK8 323 aa10.08□□□□□ -0.8
PRPF40A-208ENST00000472760 TMUB1Q9BVT8 246 aa10.08□□□□□ -0.8
PRPF40A-208ENST00000472760 PNMA3Q9UL41 463 aa10.08□□□□□ -0.8
PRPF40A-208ENST00000472760 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
PRPF40A-208ENST00000472760 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
PRPF40A-208ENST00000472760 MS4A1P11836 297 aa10.07□□□□□ -0.8
PRPF40A-208ENST00000472760 SSTR3P32745 418 aaPredicted RBP10.07□□□□□ -0.8
PRPF40A-208ENST00000472760 PSEN2P49810 448 aa10.07□□□□□ -0.8
PRPF40A-208ENST00000472760 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
PRPF40A-208ENST00000472760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-208ENST00000472760 TATDN2Q93075 761 aa10.06□□□□□ -0.8
PRPF40A-208ENST00000472760 EYA1Q99502 592 aa10.06□□□□□ -0.8
PRPF40A-208ENST00000472760 PLEKHG3A1L390 1219 aa10.05□□□□□ -0.8
PRPF40A-208ENST00000472760 RCCD1A6NED2 376 aa10.05□□□□□ -0.8
PRPF40A-208ENST00000472760 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
PRPF40A-208ENST00000472760 KIAA1468Q9P260 1216 aa10.04□□□□□ -0.8
PRPF40A-208ENST00000472760 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
PRPF40A-208ENST00000472760 SMAPO00193 183 aa10.03□□□□□ -0.8
PRPF40A-208ENST00000472760 PBX2P40425 430 aa10.03□□□□□ -0.8
PRPF40A-208ENST00000472760 ZNF687Q8N1G0 1237 aa10.03□□□□□ -0.8
PRPF40A-208ENST00000472760 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
PRPF40A-208ENST00000472760 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
PRPF40A-208ENST00000472760 DNAJB2P25686 324 aa10.02□□□□□ -0.81
PRPF40A-208ENST00000472760 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
PRPF40A-208ENST00000472760 POTEEQ6S8J3 1075 aa10.02□□□□□ -0.81
PRPF40A-208ENST00000472760 POTEMA6NI47 508 aa10.01□□□□□ -0.81
PRPF40A-208ENST00000472760 BEGAINQ9BUH8 593 aa10.01□□□□□ -0.81
PRPF40A-208ENST00000472760 DMRTA1Q5VZB9 504 aa10□□□□□ -0.81
PRPF40A-208ENST00000472760 POTEGQ6S5H5 508 aa10□□□□□ -0.81
PRPF40A-208ENST00000472760 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
PRPF40A-208ENST00000472760 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
PRPF40A-208ENST00000472760 ERICH6Q7L0X2 663 aa9.99□□□□□ -0.81
PRPF40A-208ENST00000472760 RABGEF1Q9UJ41 708 aa9.99□□□□□ -0.81
PRPF40A-208ENST00000472760 SULF1Q8IWU6 871 aa9.97□□□□□ -0.81
PRPF40A-208ENST00000472760 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
PRPF40A-208ENST00000472760 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
PRPF40A-208ENST00000472760 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
PRPF40A-208ENST00000472760 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
PRPF40A-208ENST00000472760 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
PRPF40A-208ENST00000472760 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms